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Author SHA1 Message Date
Efraim Flashner
c00906b1dd
gnu: gama: Update to 2.19. 
* gnu/packages/gps.scm (gama): Update to 2.19.
 2022-04-29 01:47:48 +03:00
Pier-Hugues Pellerin
313ae43f51
gnu: Add Avizo. 
* gnu/packages/wm.scm (avizo): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-29 00:42:08 +02:00
Alexey Abramov
4d3c142e0b
gnu: openssh: Trust Guix store directory 
* gnu/local.mk (dist_patch_DATA): Add the patch
* gnu/packages/patches/openssh-trust-guix-store-directory.patch: Patch it
* gnu/packages/ssh.scm (openssh[source]): Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-29 00:33:53 +02:00
Maya
f2eb0d3922
home: services: fish: Fix incorrect ".config" file name. 
This is a followup to 5832d9fb60.

* gnu/home/services/shells.scm (fish-files-service): Change "config/"
to ".config/".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-29 00:33:45 +02:00
Ludovic Courtès
09fcd191e1
gnu: rust-pyo3: Allow compilation with Criterion 0.3.5. 
Fixes a regression introduced in
2703daf6eb.

* gnu/packages/crates-io.scm (rust-pyo3-0.15)[modules, snippet]: New
fields.
 2022-04-28 23:54:59 +02:00
Zhu Zihao
f785299af1
gnu: flatpak: Do not leak GDK_PIXBUF_MODULE_FILE into the sandbox. 
Fixes <https://issues.guix.gnu.org/54784>.

* gnu/packages/patches/flatpak-unset-gdk-pixbuf-for-sandbox.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add corresponding entry.
* gnu/packages/package-management.scm (flatpak)[source]: Use patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-28 16:49:08 +02:00
Zhu Zihao
b01622f57d
gnu: flatpak: Use G-expressions. 
* gnu/packages/package-management.scm (flatpak): Fix indentation.
[arguments]: Use G-expressions.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-28 16:48:32 +02:00
Ricardo Wurmus
882cacc1bb
gnu: Add r-guix-install. 
* gnu/packages/cran.scm (r-guix-install): New variable.
 2022-04-28 11:11:16 +02:00
jgart
f1d08be7af
gnu: mercury: Selectively import match-lambda from ice9 module. 
* gnu/packages/mercury.scm (mercury): Use #:select instead of a
comment string for importing match-lambda.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-04-27 22:34:35 -04:00
Leo Famulari
a814b8ff9c
gnu: linux-libre 4.9: Update to 4.9.312. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.312.
(linux-libre-4.9-pristine-source): Update hash.
 2022-04-27 21:19:55 -04:00
Leo Famulari
fe5f27c127
gnu: linux-libre 4.14: Update to 4.14.277. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.277.
(linux-libre-4.14-pristine-source): Update hash.
 2022-04-27 21:19:55 -04:00
Leo Famulari
5af06b95e2
gnu: linux-libre 4.19: Update to 4.19.240. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.240.
(linux-libre-4.19-pristine-source): Update hash.
 2022-04-27 21:19:55 -04:00
Leo Famulari
bd2e507f44
gnu: linux-libre 5.4: Update to 5.4.191. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.191.
(linux-libre-5.4-pristine-source): Update hash.
 2022-04-27 21:19:55 -04:00
Leo Famulari
90334038f8
gnu: linux-libre 5.10: Update to 5.10.113. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.113.
(linux-libre-5.10-pristine-source): Update hash.
 2022-04-27 21:19:55 -04:00
Leo Famulari
43cb0d4064
gnu: linux-libre 5.15: Update to 5.15.36. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.36.
(linux-libre-5.15-pristine-source): Update hash.
 2022-04-27 21:19:54 -04:00
Leo Famulari
e180b9bc5a
gnu: linux-libre: Update to 5.17.5. 
* gnu/packages/linux.scm (linux-libre-5.17-version): Update to 5.17.5.
(linux-libre-5.17-pristine-source): Update hash.
 2022-04-27 21:19:51 -04:00
zimoun
919a7412d3
gnu: conan: Use python-pyyaml@5. 
* gnu/packages/package-management.scm (conan)[propagated-inputs]: Replace
python-pyyaml by python-yyaml-5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-27 23:23:48 +02:00
zimoun
4ed48f587e
gnu: docker-compose: Use python-pyyaml@5. 
* gnu/packages/docker.scm (docker-compose)[inputs]: Replace python-pyyaml by
python-pyyaml-5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-27 23:23:44 +02:00
zimoun
bf10421a67
gnu: python-pyyaml: Reintroduce 5.4. 
* gnu/packages/python-xyz.scm (python-pyyaml-5): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-27 23:22:43 +02:00
Wamm K. D
ff12cf5e07
gnu: Add hyfetch. 
* gnu/packages/admin.scm (hyfetch): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-27 23:18:37 +02:00
Wamm K. D
7ed87432e3
gnu: Add python-hypy-utils. 
* gnu/packages/python-xyz.scm (python-hypy-utils): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-04-27 23:15:51 +02:00
Mădălin Ionel Patrașcu
31c9f0e301
gnu: Add r-agilp. 
* gnu/packages/bioconductor.scm (r-agilp): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-27 16:35:06 +02:00
Mădălin Ionel Patrașcu
37f584592a
gnu: Add r-aggregatebiovar. 
* gnu/packages/bioconductor.scm (r-aggregatebiovar): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-27 16:29:20 +02:00
Mădălin Ionel Patrașcu
73fe0dab50
gnu: Add r-agdex. 
* gnu/packages/bioconductor.scm (r-agdex): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-27 16:24:55 +02:00
Mădălin Ionel Patrașcu
be2ead3073
gnu: Add r-affyrnadegradation. 
* gnu/packages/bioconductor.scm (r-affyrnadegradation): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-27 16:18:27 +02:00
Mădălin Ionel Patrașcu
851770312f
gnu: Add r-affixcan. 
* gnu/packages/bioconductor.scm (r-affixcan): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-27 16:07:58 +02:00
Mădălin Ionel Patrașcu
43dc50a5c7
gnu: Add r-adsplit. 
* gnu/packages/bioconductor.scm (r-adsplit): New variable.
 2022-04-27 16:03:22 +02:00
Mădălin Ionel Patrașcu
a45dfa8a73
gnu: Add r-adimpute. 
* gnu/packages/bioconductor.scm (r-adimpute): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-27 15:50:53 +02:00
Mădălin Ionel Patrașcu
b7cb4e2822
gnu: Add r-saver. 
* gnu/packages/cran.scm (r-saver): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-27 15:50:53 +02:00
Zhu Zihao
4fb6ef6636
gnu: git: Update to 2.36.0 [fixes CVE-2022-24765]. 
See: https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2022-24765.

* gnu/packages/version-control.scm (git): Update to 2.36.0.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-04-27 11:31:19 +02:00
Vincent Prat
de61e49085
gnu: Add python-mike. 
* gnu/packages/python-xyz.scm (python-mike): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-04-27 11:28:37 +02:00
Foo Chuan Wei
090b3823b8
gnu: Add worklog. 
* gnu/packages/task-management.scm (worklog): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-04-27 11:23:09 +02:00
Foo Chuan Wei
b840c50b3f
gnu: Add wtime. 
* gnu/packages/task-management.scm (wtime): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-04-27 11:20:00 +02:00
Vinicius Monego
b147a4a2f3
gnu: shotcut: Update to 22.04.25. 
* gnu/packages/video.scm (shotcut): Update to 22.04.25.
 2022-04-27 00:42:14 -03:00
Vinicius Monego
fb2c136eb3
gnu: emacs-elpher: Update to 3.3.3. 
* gnu/packages/emacs-xyz.scm (emacs-elpher): Update to 3.3.3.
 2022-04-26 23:32:22 -03:00
Vinicius Monego
659effc707
gnu: emacs-org-roam: Update to 2.2.2. 
* gnu/packages/emacs-xyz.scm (emacs-org-roam): Update to 2.2.2.
 2022-04-26 23:32:21 -03:00
Vinicius Monego
48f0e98f2d
gnu: emacs-org-re-reveal: Update to 3.13.0. 
* gnu/packages/emacs-xyz.scm (emacs-org-re-reveal): Update to 3.13.0.
 2022-04-26 23:32:21 -03:00
Vinicius Monego
b1ab688b9e
gnu: emacs-vertico: Update to 0.23. 
* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.23.
 2022-04-26 23:32:21 -03:00
Vinicius Monego
359c88a465
gnu: emacs-consult: Update to 0.17. 
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.17.
 2022-04-26 23:32:21 -03:00
Vinicius Monego
4809f290ab
gnu: emacs-corfu: Add new phase after unpack. 
* gnu/packages/emacs-xyz.scm (emacs-corfu)[arguments]<#:phases>: After the
unpack phase add a move-source-files phase.
 2022-04-26 23:32:15 -03:00
jgart
a27804a353
gnu: emacs-corfu: Update to 0.22. 
* gnu/packages/emacs-xyz.scm (emacs-corfu): Update to 0.22.

Signed-off-by: Vinicius Monego <monego@posteo.net>
 2022-04-26 22:33:59 -03:00
Mădălin Ionel Patrașcu
936f23a654
gnu: Add r-adamgui. 
* gnu/packages/bioconductor.scm (r-adamgui): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2022-04-26 23:47:54 +02:00
Ricardo Wurmus
1c3c00a8a1
gnu: Add bart. 
* gnu/packages/image-processing.scm (bart): New variable.
 2022-04-26 16:50:32 +02:00
Luis Felipe
58f3727767
gnu: gfeeds: Make it start. 
This change patches the version of WebKit required by the program to a
version available in Guix, so that the program actually starts.

* gnu/packages/syndication.scm (gfeeds)[arguments]: Require WebKit2
4.1 instead of 4.0, which is not available.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-04-26 11:07:51 +02:00
Zhu Zihao
30ff557bd7
gnu: rtl8821ce-linux-module: Update to 0.0.0-5-dce62b9. 
Fixes the broken build with linux-libre 5.17.x.

* gnu/packages/linux.scm (rtl8821ce-linux-module): Update to 0.0.0-5-dce62b9.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-04-26 11:04:53 +02:00
Brian Cully
9c4398acdf
gnu: zfs: Update to 2.1.4. 
* gnu/packages/file-systems.scm (zfs): Update to 2.1.4.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-04-26 11:02:17 +02:00
Paul A. Patience
ee89bbb5ed
gnu: nomad-optimizer: Disable failing test. 
* gnu/packages/maths.scm (nomad-optimizer)[arguments]: Disable the
examples/advanced/library/PSDMads test.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-04-26 10:45:42 +02:00
Ricardo Wurmus
33fe027f91
gnu: Add r-giotto. 
* gnu/packages/bioinformatics.scm (r-giotto): New variable.
 2022-04-26 09:48:14 +02:00
Ricardo Wurmus
b79431b5e9
gnu: Add r-lfa. 
* gnu/packages/bioconductor.scm (r-lfa): New variable.
 2022-04-26 09:48:13 +02:00
Ricardo Wurmus
190830bd80
gnu: Add r-dbscan. 
* gnu/packages/cran.scm (r-dbscan): New variable.
 2022-04-26 09:48:13 +02:00