Maxim Cournoyer
0837d0aaf1
gnu: Remove python2-fastlmm.
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* gnu/packages/machine-learning.scm (python2-fastlmm): Delete variable.
2022-05-31 14:52:25 -04:00
Maxim Cournoyer
7ebb6b7b2b
gnu: Remove python2-pytest-cache.
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* gnu/packages/check.scm (python2-pytest-cache): Delete variable.
2022-05-31 14:52:25 -04:00
Maxim Cournoyer
32ec89285f
gnu: Remove python2-statsmodels.
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* gnu/packages/statistics.scm (python2-statsmodels): Delete variable.
2022-05-31 14:52:25 -04:00
Maxim Cournoyer
46ef39b4be
gnu: Remove python2-html5lib.
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* gnu/packages/python-web.scm (python2-html5lib): Delete variable.
(python-html5lib-0.9, python2-html5lib-0.9): Likewise.
2022-05-31 14:52:25 -04:00
Maxim Cournoyer
b3c7d69fa0
gnu: Remove python2-pandas.
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* gnu/packages/python-science.scm (python2-pandas): Delete variable.
(python-pandas): Delete related python2-variant property.
2022-05-31 14:52:25 -04:00
Maxim Cournoyer
1db8080591
gnu: ocrodjvu: Use a Python 3 compatible fork.
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* gnu/packages/djvu.scm (ocrodjvu)[source]: Update URL to Python 3 fork.
[inputs]: Use new style. Remove python2-subprocess32. Replace all other
Python 2 inputs by their Python 3 equivalent. Add python-future and
python-regex.
[arguments]: Use gexps, and adjust accordingly, using this-package-input and
search-input-file.
2022-05-31 14:52:24 -04:00
Maxim Cournoyer
1c865e8e1c
gnu: Remove python2-scikit-learn.
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* gnu/packages/machine-learning.scm (python2-scikit-learn): Delete variable.
(python-scikit-learn)[properties]: Remove the python2-variant property.
2022-05-31 14:52:24 -04:00
Maxim Cournoyer
dc514a5164
gnu: Remove python2-pytest-pep8.
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* gnu/packages/check.scm (python2-pytest-pep8): Delete variable.
2022-05-31 14:52:24 -04:00
Maxim Cournoyer
716b5bd9d9
gnu: Remove python2-hiredis.
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* gnu/packages/databases.scm (python2-hiredis): Delete variable.
2022-05-31 14:52:24 -04:00
Maxim Cournoyer
bef8185d08
gnu: Remove python2-pymysql.
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* gnu/packages/databases.scm (python2-pymysql): Delete variable.
2022-05-31 14:52:24 -04:00
Maxim Cournoyer
e9121c2dda
gnu: Remove python2-pyodbc-c.
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* gnu/packages/databases.scm (python2-pyodbc-c): Delete variable.
2022-05-31 14:52:24 -04:00
Maxim Cournoyer
25e4ddd849
gnu: Remove python2-py2neo.
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* gnu/packages/databases.scm (python2-py2neo): Delete variable.
2022-05-31 14:52:23 -04:00
Maxim Cournoyer
3ad04860d5
gnu: Remove python2-apsw.
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* gnu/packages/databases.scm (python2-apsw): Delete variable.
2022-05-31 14:52:23 -04:00
Maxim Cournoyer
f503181ffb
gnu: Remove python2-ccm.
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* gnu/packages/databases.scm (python2-ccm): Delete variable.
2022-05-31 14:52:23 -04:00
Maxim Cournoyer
80963d9b0f
gnu: Remove python2-peewee.
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* gnu/packages/databases.scm (python2-peewee): Delete variable.
2022-05-31 14:52:23 -04:00
Maxim Cournoyer
5ed4cfb924
gnu: Remove python2-trollius-redis.
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* gnu/packages/databases.scm (python2-trollius-redis): Delete variable.
2022-05-31 14:52:23 -04:00
Maxim Cournoyer
1aab8a5114
gnu: Remove python2-redis.
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* gnu/packages/databases.scm (python2-redis): Delete variable.
2022-05-31 14:52:22 -04:00
Maxim Cournoyer
466d81aae4
gnu: Remove python2-neo4j-driver.
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* gnu/packages/databases.scm (python2-neo4j-driver): Delete variable.
2022-05-31 14:52:22 -04:00
Maxim Cournoyer
99d5c9b54a
gnu: Remove nmoldyn.
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* gnu/packages/chemistry.scm (nmoldyn): Delete variable.
2022-05-31 14:52:22 -04:00
Maxim Cournoyer
dbac9f890e
gnu: Remove domainfinder.
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* gnu/packages/chemistry.scm (domainfinder): Delete variable.
2022-05-31 14:52:22 -04:00
Maxim Cournoyer
be6740df96
gnu: Remove python2-nose-randomly.
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* gnu/packages/check.scm (python2-nose-randomly): Delete variable.
2022-05-31 14:52:22 -04:00
Maxim Cournoyer
6e763df31c
gnu: Remove python2-pytest-subtesthack.
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* gnu/packages/check.scm (python2-pytest-subtesthack): Delete variable.
2022-05-31 14:52:21 -04:00
Maxim Cournoyer
af6d88c803
gnu: Remove python2-pytest-flakes.
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* gnu/packages/check.scm (python2-pytest-flakes): Delete variable.
2022-05-31 14:52:21 -04:00
Maxim Cournoyer
2abde9b927
gnu: Remove python2-cov-core.
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* gnu/packages/check.scm (python2-cov-core): Delete variable.
2022-05-31 14:52:21 -04:00
Maxim Cournoyer
f9d31d90ec
gnu: Remove python2-discover.
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* gnu/packages/check.scm (python2-discover): Delete variable.
2022-05-31 14:52:21 -04:00
Maxim Cournoyer
359a0b6c2e
gnu: Remove python2-flexmock.
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* gnu/packages/check.scm (python2-flexmock): Delete variable.
2022-05-31 14:52:21 -04:00
Maxim Cournoyer
ae2f3bed76
gnu: Remove python2-minimock.
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* gnu/packages/check.scm (python2-minimock): Delete variable.
2022-05-31 14:52:20 -04:00
Maxim Cournoyer
2af19eb9b5
gnu: Remove python2-rednose.
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* gnu/packages/check.scm (python2-rednose): Delete variable.
2022-05-31 14:52:20 -04:00
Maxim Cournoyer
4178b304ab
gnu: Remove python2-python-paramunittest.
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* gnu/packages/check.scm (python2-python-paramunittest): Delete variable.
2022-05-31 14:52:20 -04:00
Maxim Cournoyer
099c5a90e4
gnu: Remove python2-pytest-capturelog.
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* gnu/packages/check.scm (python2-pytest-capturelog): Delete variable.
2022-05-31 14:52:20 -04:00
Maxim Cournoyer
94447313e8
gnu: Remove python2-nose2.
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* gnu/packages/check.scm (python2-nose2): Delete variable.
2022-05-31 14:52:20 -04:00
Maxim Cournoyer
dc0da7e56f
gnu: Remove python2-testlib.
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* gnu/packages/check.scm (python2-testlib): Delete variable.
2022-05-31 14:52:19 -04:00
Maxim Cournoyer
dc612d54fd
gnu: Remove python2-pytest-catchlog.
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* gnu/packages/check.scm (python2-pytest-catchlog): Delete variable.
2022-05-31 14:52:19 -04:00
Maxim Cournoyer
4746f9fc63
gnu: Remove python2-nose-timer.
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* gnu/packages/check.scm (python2-nose-timer): Delete variable.
2022-05-31 14:52:19 -04:00
Maxim Cournoyer
ddec4b81d6
gnu: Remove transmission-remote-cli.
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* gnu/packages/bittorrent.scm (transmission-remote-cli): Delete variable.
2022-05-31 14:52:19 -04:00
Maxim Cournoyer
c30ab2c0b4
gnu: Remove pyicoteo.
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* gnu/packages/bioinformatics.scm (pyicoteo): Delete variable.
2022-05-31 14:52:19 -04:00
Maxim Cournoyer
ba09192168
gnu: Remove python2-pbcore.
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* gnu/packages/bioinformatics.scm (python2-pbcore): Delete variable.
2022-05-31 14:52:19 -04:00
Maxim Cournoyer
8287979669
gnu: Remove python2-pyfaidx.
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* gnu/packages/bioinformatics.scm (python2-pyfaidx): Delete variable.
2022-05-31 14:52:18 -04:00
Maxim Cournoyer
850bd0c329
gnu: Remove python2-screed.
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* gnu/packages/bioinformatics.scm (python2-screed): Delete variable.
2022-05-31 14:52:18 -04:00
Maxim Cournoyer
a94bc7798a
gnu: Remove miso.
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* gnu/packages/bioinformatics.scm (miso): Delete variable.
2022-05-31 14:52:18 -04:00
Maxim Cournoyer
23e133a907
gnu: Remove python2-warpedlmm.
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* gnu/packages/bioinformatics.scm (python2-warpedlmm): Delete variable.
2022-05-31 14:52:18 -04:00
Maxim Cournoyer
bb35b50adc
gnu: Remove poretools.
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* gnu/packages/bioinformatics.scm (poretools): Delete variable.
2022-05-31 14:52:18 -04:00
Maxim Cournoyer
bcdd45be6f
gnu: Remove python2-dendropy.
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* gnu/packages/bioinformatics.scm (python2-dendropy): Delete variable.
2022-05-31 14:52:17 -04:00
Maxim Cournoyer
d2c971e67b
gnu: Remove bamm.
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* gnu/packages/bioinformatics.scm (bamm): Delete variable.
2022-05-31 14:52:17 -04:00
Maxim Cournoyer
1010c05800
gnu: Remove python2-pybedtools.
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* gnu/packages/bioinformatics.scm (python2-pybedtools): Delete variable.
2022-05-31 14:52:17 -04:00
Maxim Cournoyer
725b562962
gnu: Remove python2-htseq.
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* gnu/packages/bioinformatics.scm (python2-htseq): Delete variable.
2022-05-31 14:52:17 -04:00
Maxim Cournoyer
8bcb07d089
gnu: Remove pepr.
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* gnu/packages/bioinformatics.scm (pepr): Delete variable.
2022-05-31 14:52:17 -04:00
Maxim Cournoyer
3d63c5f1ba
gnu: tetoolkit: Update to 2.2.1b.
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* gnu/packages/bioinformatics.scm (tetoolkit): Update to 2.2.1b.
[python]: Delete argument.
[phases]: Delete trailing #t.
{make-writable}: Delete phase.
{adjust-requirements}: New phase.
{patch-invocations}: Use search-input-file.
{wrap-program}: Use search-input-file.
[inputs]: Remove python2-argparse. Replace python2-pysam with python-pysam.
[home-page]: Update URL.
2022-05-31 14:52:16 -04:00
Maxim Cournoyer
d29d50a556
gnu: Remove python2-pybigwig.
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* gnu/packages/bioinformatics.scm (python2-pybigwig): Delete variable.
2022-05-31 14:52:16 -04:00
Maxim Cournoyer
98c4f97d18
gnu: Remove ribodiff.
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* gnu/packages/bioinformatics.scm (ribodiff): Delete variable.
2022-05-31 14:52:16 -04:00
