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Author SHA1 Message Date
Sharlatan Hellseher 14942e2abb
gnu: Add cl-arrow-macros. 
* gnu/packages/lisp-xyz.scm (cl-arrow-macros, ecl-arrow-macros,
sbcl-arrow-macros): New variables.

Change-Id: I1d92139871f456d7d6780f2e60bbfed951d0298e
 2024-03-21 21:57:32 +00:00
Sharlatan Hellseher 9d1f3593e8
gnu: cl-form-types: Update to 0.3.2. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-form-types): Update to 0.3.2.

Change-Id: I33a90bba9efb181466d113951a9eb398d20b2648
 2024-03-21 21:57:31 +00:00
Sharlatan Hellseher ae1c3ce8dc
gnu: cl-form-types: Disable tests on ECL implementation. 
* gnu/packages/lisp-xyz.scm (ecl-cl-form-types): Disable tests.

Change-Id: I8cca905edc57bf4e3e25847aff425ef1762f2e3f
 2024-03-21 21:57:31 +00:00
Ludovic Courtès d67e4f0f9b
doc: Add “Source Tree Structure” section. 
* doc/contributing.texi (Source Tree Structure): New node.
* doc/guix.texi (Programming Interface): Add cross-reference.

Change-Id: I141a1f4d806ae5f72c7a246e18c14dc63056a607
 2024-03-21 17:43:16 +01:00
Ludovic Courtès a2077e5bee
services: guix-publish: Use ‘make-systemd-constructor’ unconditionally. 
The #:lazy-start? parameter was added in the Shepherd 0.10.0, which is
required since commit 477d4f7d24.

* gnu/services/base.scm (guix-publish-shepherd-service): Use
‘make-systemd-constructor’ unconditionally and pass #:lazy-start?.

Change-Id: I95aa079732cd21e32091c7deea2ed2f1bc50f2f2
 2024-03-21 17:43:16 +01:00
Richard Sent d282a31f52
reconfigure: Skip starting new shepherd services with auto-start? #f 
Fixes <https://bugs.gnu.org/68093>.

* guix/scripts/system/reconfigure.scm (upgrade-shepherd-services): Only add
new shepherd services with auto-start? #t to to-start list.

Change-Id: I268b921336fb1195ed76746eb6178889dbc258b4
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2024-03-21 17:43:16 +01:00
Ludovic Courtès c8c5d12e45
doc: Update ‘block-facebook-hosts-service-type’ description. 
This is a followup to c1d37d0653.

* doc/guix.texi (Networking Services): Update to mention unroutable
addresses.

Change-Id: I6f62e1f414a3eb7892b2d4cc0d011458bbec7001
 2024-03-21 17:43:16 +01:00
Ludovic Courtès 6f9d844d2e
services: shepherd: Load each service file in a fresh module. 
Fixes <https://issues.guix.gnu.org/67649>.

* gnu/home/services/shepherd.scm (home-shepherd-configuration-file)[config]:
Define ‘make-user-module’.  Call ‘load’ in ‘save-module-excursion’.
* gnu/services/shepherd.scm (shepherd-configuration-file): Likewise.

Reported-by: Attila Lendvai <attila@lendvai.name>
Change-Id: I7df11c81b5bbbf2b24a8daa02502a000e0826fe0
 2024-03-21 17:43:15 +01:00
Clément Lassieur 2b052fe3c0
gnu: mullvadbrowser: Update to 13.0.12. 
* gnu/packages/mullvad-browsers.scm (%mullvadbrowser-build-date): Update to
20240313183935.
(%mullvadbrowser-version): Update to 13.0.12.
(%mullvadbrowser-firefox-version): Update to 115.9.0esr-13.0-1-build2.
(mullvadbrowser-translation-base): Update to
595dcd5efe752cddc1b6ba47082ad9f5f4917fee.
(mullvadbrowser-translation-specific): Update to
c5361cb496ae7e047fd9226139537f1fcfc7938d.

Change-Id: I365d5517cc145c0b66b502b5ed1738bf978a29da
 2024-03-21 17:35:57 +01:00
Clément Lassieur 458b3cd3d4
gnu: torbrowser: Update to 13.0.12. 
* gnu/packages/tor-browsers.scm (%torbrowser-build-date): Update to
20240318163712.
(%torbrowser-version): Update to 13.0.12.
(%torbrowser-firefox-version): Update to 115.9.0esr-13.0-1-build3.
(torbrowser-translation-base): Update to
a4d224e82808529e135259e04fb58fb39b90da2d.
(torbrowser-translation-specific): Update to
e7aabc54138211e23bc60af1abe492c8bc68ce4b.

Change-Id: I878f26149b22f5703e2e9bb7ee0aa1f4c4ada589
 2024-03-21 17:35:52 +01:00
Clément Lassieur 50f6077a43
gnu: make-torbrowser: Make products independent from each other. 
* gnu/packages/tor-browsers.scm (translation-base-browser): Rename to
torbrowser-translation-base.
(mullvadbrowser-translation-base): New variable.
(translation-tor-browser): Rename to torbrowser-translation-specific.
(translation-mullvad-browser): Rename to mullvadbrowser-translation-specific.
(make-torbrowser): Add ‘translation-base’ and ‘translation-specific’
parameters and use them.
(torbrowser, mullvadbrowser-base): Use the above parameters.
(mullvadbrowser): Handle renaming.

This allows translation-base-browser (now torbrowser-translation-base) and
translation-tor-browser (now torbrowser-translation-specific) to be updated
without triggering an update for Mullvad Browser.

Change-Id: I2a94636eb6b0531c3a03cdb73c560d68060721ef
 2024-03-21 17:30:06 +01:00
Ricardo Wurmus 9b84b36296
gnu: Add r-pairadise. 
* gnu/packages/bioinformatics.scm (r-pairadise): New variable.

Change-Id: I7314d43c75ed008942757feb878628d1ac855f31
 2024-03-21 14:39:38 +01:00
Ricardo Wurmus 0944c5b028
gnu: Add pairadise. 
* gnu/packages/bioinformatics.scm (pairadise): New variable.

Change-Id: I4ad543dea3ddcafd5cbf07623f1faaabb954ba40
 2024-03-21 14:33:47 +01:00
Efraim Flashner ec0e5e9369
gnu: universal-ctags: Update to 6.1.20240317.0. 
* gnu/packages/code.scm (universal-ctags): Update to 6.1.20240317.0.

Change-Id: I035bc73702fbe9951820e176f09bde16bd9049c6
 2024-03-21 14:08:05 +02:00
Efraim Flashner 7f4cd6c50c
gnu: global: Update to 6.6.12. 
* gnu/packages/code.scm (global): Update to 6.6.12.

Change-Id: If073f74f55199bfbc9f29b95e9e3db3a6cf00548
 2024-03-21 14:08:05 +02:00
Efraim Flashner 4005c5da6d
gnu: toot: Update to 0.42.0. 
* gnu/packages/mastodon.scm (toot): Update to 0.42.0.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-pyyaml, python-typing-extensions.
[inputs]: Add python-click, python-urwidgets.

Change-Id: I085531e63e6f811319715cfddfad9f17c877897d
 2024-03-21 13:57:33 +02:00
Efraim Flashner 1f6474a819
gnu: Add python-urwidgets. 
* gnu/packages/python-xyz.scm (python-urwidgets): New variable.

Change-Id: I34a1cff78d9e930b13c01d53ab34f7ee57478a39
 2024-03-21 13:57:15 +02:00
Efraim Flashner 2f4f6db30b
gnu: libportal: Update to 0.7.1. 
* gnu/packages/freedesktop.scm (libportal): Update to 0.7.1.

Change-Id: Iab3cf48ce63e2149b5680dbc852d0ed4483de6cc
 2024-03-21 13:43:47 +02:00
Efraim Flashner 51ea39b2c7
gnu: xdg-desktop-portal-wlr: Update to 0.7.1. 
* gnu/packages/freedesktop.scm (xdg-desktop-portal-wlr): Update to 0.7.1.

Change-Id: Id716cffe6db65fd3827dd52871b0620187466c5d
 2024-03-21 13:43:14 +02:00
Efraim Flashner 972f2c4926
gnu: khard: Update to 0.19.1. 
* gnu/packages/mail.scm (khard): Update to 0.19.1.

Change-Id: Ic091cc761920776f03a0d69189dc0b117db3786f
 2024-03-21 13:22:20 +02:00
Efraim Flashner c415e9e253
gnu: khal: Update to 0.11.3. 
* gnu/packages/calendar.scm (khal): Update to 0.11.3.

Change-Id: I848166bfe9469ee37b8acd126fdc3a307914a63b
 2024-03-21 13:22:20 +02:00
Efraim Flashner 8b462c34a2
gnu: wgetpaste: Update to 2.34. 
* gnu/packages/wget.scm (wgetpaste): Update to 2.34.
[arguments]: Remove custom 'change-unfriendly-default phase.

Change-Id: I5677881702ffce7846552552bb7bceec81177843
 2024-03-21 13:08:06 +02:00
Giacomo Leidi 69951a61a1
gnu: emacs-extempore-mode: Update to 0.0.0-1.92e0fff. 
* gnu/packages/emacs-xyz.scm (emacs-extempore-mode): Update to to 0.0.0-1.92e0fff.

Change-Id: I1e4cfebedf5450384e40425619925ecdf7465a64
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-03-20 14:52:34 +00:00
apoorv569 9b611cd175
gnu: emacs-evil-collection: Update to 0.0.10. 
* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 0.0.10.

Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: I864c9a6434e9ba46cfb510183962aa6b3739b32a
 2024-03-20 14:44:46 +00:00
Nicolas Graves a24aa227f7
gnu: python-joblib: Update to 1.3.2. 
* gnu/packages/python-xyz.scm (python-joblib): Update to 1.3.2.
[build-system]: Update to pyproject-build-system.
[arguments]
  <#:phases>: Remove check phase.
  <#:test-flags>: Keep former test flag.
[propagated-inputs]: Add python-psutil.

Change-Id: Ide110a19431b1d26e1d7dd8d1adc3b3f0f417749
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2024-03-20 14:33:05 +00:00
Christopher Baines 5d1ba303df
gnu: xfce4-dev-tools: Add libxslt as a native-input. 
As the configure script is looking for it.

* gnu/packages/xfce.scm (xfce4-dev-tools)[native-inputs]: Add libxslt.

Change-Id: Ia7ab573bbdf7461fc68053667a5962717afd0015
 2024-03-20 14:30:22 +00:00
Guillaume Le Vaillant 6cb181c07f
gnu: electron-cash: Update to 4.4.0. 
* gnu/packages/finance.scm (electron-cash): Update to 4.4.0.

Change-Id: Ibe9ee61d4d2817b68fb36fb3072c6d16b8bc1016
 2024-03-20 13:24:34 +01:00
Andre A. Gomes dfd929b3b1
gnu: nyxt: Update to 3.11.5. 
* gnu/packages/web-browsers.scm (nyxt): Update to 3.11.5.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-03-20 13:13:57 +01:00
Andre A. Gomes 3f5fe4503c
gnu: sbcl-slime-swank: Update to 2.29.1. 
* gnu/packages/lisp-xyz.scm (sbcl-slime-swank): Update to 2.29.1.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-03-20 12:56:33 +01:00
Andre A. Gomes fa36331344
gnu: emacs-slime: Update to 2.29.1. 
* gnu/packages/emacs-xyz.scm (emacs-slime): Update to 2.29.1.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-03-20 12:56:06 +01:00
Guillaume Le Vaillant be88124ebc
gnu: txr: Update to 294. 
* gnu/packages/lisp.scm (txr): Update to 294.

Change-Id: I53693122aaf5b2c0ae8f7f13e846de81f1525fc1
 2024-03-20 11:57:38 +01:00
Giacomo Leidi b7eb1a8116
gnu: Add alsa-midi-latency-test. 
* gnu/packages/audio.scm (alsa-midi-latency-test): New variable.

Change-Id: I35d3047cb997c5787de515a38ae0a0eb8f12600d
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2024-03-19 17:31:40 +01:00
Romain GARBAGE b213afbf58
gnu: combinatorial-blas: Skip failing tests. 
* gnu/packages/maths.scm (combinatorial-blas): Add new phase.

Change-Id: Ifefb2b17e6758547d38290753a7cd338032a6abb
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2024-03-19 17:31:32 +01:00
Tanguy Le Carrour 74533133d3
gnu: Add python-pypugjs. 
* gnu/packages/python-xyz.scm (python-pypugjs): New variable.

Change-Id: I050ab42d0149fcffddcf6b12dd9c1ddea23f84c9
Signed-off-by: Tanguy Le Carrour <tanguy@bioneland.org>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2024-03-19 17:19:01 +01:00
stuebinm d082573db1
gnu: hikari: Build against wlroots@0.15. 
It fails to build with versions of wlroots newer than 0.15, which
seems unlikey to be fixed https://hub.darcs.net/raichoo/hikari/issue/45

* gnu/packages/wm.scm (wlroots-0.15): New variable.
(hikari)[inputs]: Replace wlroots with wlroots-0.15.

Change-Id: Id90e1e1ff399afe54fff68167f497f0484d2c218
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2024-03-19 17:02:53 +01:00
Ludovic Courtès 176e2eda7f
doc: cookbook: Account for ‘guix pull’ in /etc/profile instructions. 
* doc/guix-cookbook.texi (Setting Up Compute Nodes): Include
$HOME/.config/guix/current.

Change-Id: I6c1c42394991af8f1fa7c2630bdb4b0aef946c2b
 2024-03-19 17:02:15 +01:00
Ludovic Courtès b7931e6f5d
git authenticate: Document ‘--end’. 
* guix/scripts/git/authenticate.scm (show-help): Document ‘--end’.
* doc/guix.texi (Invoking guix git authenticate): Likewise.

Reported-by: Tomas Volf <~@wolfsden.cz>
Change-Id: Ia646203ce2f721487de547c76b9488754c70db66
 2024-03-19 17:02:14 +01:00
Ludovic Courtès c90a4e8dcd
describe: Try harder to find the ‘guix pull’ profile. 
Fixes <https://issues.guix.gnu.org/66705>.

The strategy used by ‘current-profile’ so far would fail to find the
right profile (the one created by ‘guix pull’ or ‘guix time-machine’) in
cases where said profile is itself included in another profile.  This
happens, for instance, when running ‘guix shell -CW -- guix describe’,
which, as a result, would display nothing but the ‘guix’ channel.

This patch fixes that by having ‘current-profile’ not just check for the
presence of a ‘manifest’ file but also parse it to determine whether
it’s a ‘guix pull’ kind of manifest.

* guix/describe.scm (find-profile): New procedure.
(current-profile): Adjust to use it.

Change-Id: I9194f54ce1496a6591e247c76203f497f28c330b
 2024-03-19 17:02:14 +01:00
Ludovic Courtès 06baf4d6ba
profiles: ‘read-manifest’ raises to ‘&profile-error’ upon version mismatch. 
* guix/profiles.scm (sexp->manifest): In the catch-all clause, raise to
‘&profile-error’ in addition to ‘&message’.

Change-Id: Ieb08187b388531c2157bfe67fb1b7319dbbb4ff3
 2024-03-19 17:02:14 +01:00
Mark H Weaver ee11b22fcc
gnu: icecat: Update to 115.9.0-guix0-preview1 [security fixes]. 
Includes fixes for CVE-2023-5388, CVE-2024-0743, CVE-2024-2605,
CVE-2024-2607, CVE-2024-2608, CVE-2024-2610, CVE-2024-2611,
CVE-2024-2612, CVE-2024-2614, and CVE-2024-2616.

* gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
 2024-03-19 10:16:35 -04:00
Ricardo Wurmus 26aa8fc87e
gnu: snakemake-7: Patch tibanna command line. 
* gnu/packages/python-xyz.scm (snakemake-7)[arguments]: Remove store reference
in tibanna command line.

Change-Id: I339f4c3133a0e687723a53277818749a8e5fc97a
 2024-03-19 15:01:38 +01:00
Ricardo Wurmus 7286a4569d
gnu: r-hmisc: Update to 5.1-2. 
* gnu/packages/statistics.scm (r-hmisc): Update to 5.1-2.

Change-Id: I6b6ab9916f58323f0bc523e3c8ff0a22e59d63b5
 2024-03-19 14:43:27 +01:00
Ricardo Wurmus c81807e871
gnu: r-tidyselect: Update to 1.2.1. 
* gnu/packages/statistics.scm (r-tidyselect): Update to 1.2.1.

Change-Id: Id5cddcbd6180070c16651634eff8cd9c4839c104
 2024-03-19 14:43:27 +01:00
Ricardo Wurmus 9b32c43908
gnu: r-digest: Update to 0.6.35. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.35.

Change-Id: I054d6daa5b056241547411e83a30a7d1e7afd2d1
 2024-03-19 14:43:27 +01:00
Ricardo Wurmus 8b46813272
gnu: r-ragg: Update to 1.3.0. 
* gnu/packages/cran.scm (r-ragg): Update to 1.3.0.

Change-Id: I3e44fe7dab732944082223cbde4f6cbd2800714f
 2024-03-19 14:43:26 +01:00
Ricardo Wurmus 11395f5682
gnu: r-mlr3learners: Update to 0.6.0. 
* gnu/packages/cran.scm (r-mlr3learners): Update to 0.6.0.

Change-Id: Iac86172bfc5d3d3b719ccacb4b87c120ce2cc596
 2024-03-19 14:43:26 +01:00
Ricardo Wurmus baa0e92947
gnu: r-seurat: Update to 5.0.3. 
* gnu/packages/cran.scm (r-seurat): Update to 5.0.3.

Change-Id: Id86830ab2ce8122989bf88149fb9d733b8a458fa
 2024-03-19 14:43:26 +01:00
Ricardo Wurmus 4286ff407e
gnu: r-erm: Update to 1.0-6. 
* gnu/packages/cran.scm (r-erm): Update to 1.0-6.

Change-Id: I2bfd514d63ee0ae873d4368f7fb2ba9798998cd5
 2024-03-19 14:43:26 +01:00
Ricardo Wurmus 9e31e0a0a0
gnu: r-gamlss-data: Update to 6.0-6. 
* gnu/packages/cran.scm (r-gamlss-data): Update to 6.0-6.

Change-Id: I6bb7a4ae35b7c83d132979a6024d4cedabe97eb3
 2024-03-19 14:43:26 +01:00
Ricardo Wurmus d2cb6f5cb2
gnu: r-parameters: Update to 0.21.6. 
* gnu/packages/cran.scm (r-parameters): Update to 0.21.6.

Change-Id: Ie0c10257117909ca246eb01b9a15b94adbf6d85c
 2024-03-19 14:43:26 +01:00