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Author SHA1 Message Date
Marius Bakke 13c46cc29d
gnu: PostgreSQL: Promote version 14 to the default. 
* gnu/packages/databases.scm (postgresql): Alias to POSTGRESQL-14.
* gnu/packages/qt.scm (qtbase-5)[inputs]: Stay on POSTGRESQL-13.
 2022-06-14 23:33:54 +02:00
Marius Bakke bd16e7c32d
gnu: python-asyncpg: Update to 0.25.0. 
* gnu/packages/databases.scm (python-asyncpg): Update to 0.25.0.
[native-inputs]: Remove PYTHON-FLAKE8, PYTHON-PYCODESTYLE, PYTHON-SPHINX,
PYTHON-SPHINX-RTD-THEME, and PYTHON-SPHINXCONTRIB-ASYNCIO.
 2022-06-14 23:33:54 +02:00
Marius Bakke d51a097460
gnu: python-tortoise-orm: Update to 0.19.1. 
* gnu/packages/databases.scm (python-tortoise-orm): Update to 0.19.1.
 2022-06-14 23:33:53 +02:00
Marius Bakke 3f033b6d9e
gnu: python-pypika-tortoise: Update to 0.1.5. 
* gnu/packages/databases.scm (python-pypika-tortoise): Update to 0.1.5.
 2022-06-14 23:33:53 +02:00
Marius Bakke 9f1713f219
gnu: gplates: Update to 2.3.01-beta.3. 
* gnu/packages/geo.scm (gplates): Update to 2.3.01-beta.3.
[source](uri): Adjust for beta releases.
[source](file-name): Adjust for zipball.
[native-inputs]: Add UNZIP.
[inputs]: Simplify.
 2022-06-14 23:33:53 +02:00
Marius Bakke ec4515389a
gnu: perl-dbd-pg: Update to 3.15.1. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.15.1.
 2022-06-14 23:33:53 +02:00
Marius Bakke 334c849ba1
gnu: python-acme, certbot: Update to 1.28.0. 
* gnu/packages/tls.scm (python-acme): Update to 1.28.0.
[arguments]: Override check phase.
(certbot)[source]: Update hash.
 2022-06-14 23:33:53 +02:00
Marius Bakke 73e0063888
gnu: python-josepy: Update to 1.13.0. 
* gnu/packages/python-crypto.scm (python-josepy): Update to 1.13.0.
[propagated-inputs]: Remove PYTHON-SIX.
 2022-06-14 23:33:53 +02:00
Marius Bakke d73b88d826
gnu: TimescaleDB: Update to 2.7.0. 
* gnu/packages/databases.scm (timescaledb): Update to 2.7.0.
[source](snippet): Remove more files.
[source](patches): New field.
* gnu/packages/patches/timescaledb-flaky-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2022-06-14 23:33:52 +02:00
Marius Bakke b98a61a8f8
gnu: ruby-pg: Update to 1.3.5. 
* gnu/packages/ruby.scm (ruby-pg): Update to 1.3.5.
[home-page]: Change to current.
[source]: Switch to GIT-FETCH.
[arguments]: Add #:phases.
 2022-06-14 23:33:52 +02:00
Marius Bakke 4601dccb36
gnu: PostgreSQL@13: Update replacement to 13.7 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-13/replacement): Update to 13.7.
 2022-06-14 23:33:52 +02:00
Marius Bakke 3787f56734
gnu: PostgreSQL@10: Update to 10.21 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-10): Update to 10.21.
 2022-06-14 23:33:52 +02:00
Marius Bakke a18f937b56
gnu: PostgreSQL@11: Update to 11.16 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-11): Update to 11.16.
 2022-06-14 23:33:52 +02:00
Marius Bakke f4f31bb99c
gnu: PostgreSQL@14: Update to 14.3 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-14): Update to 14.3.
 2022-06-14 23:33:51 +02:00
Marius Bakke e03b450c36
gnu: PostgreSQL: Permit loading plugins from symlink unions again. 
...this fixes a regression since 49b350fafc where the patch to disable
symlink resolving went missing from versions < 14.

* gnu/packages/databases.scm (postgresql-13/replacement): New variable.
(postgresql-13)[replacement]: New field.
(postgresql-11)[source](patches): Add 'postgresql-disable-resolve_symlinks.patch'.
 2022-06-14 23:33:51 +02:00
Greg Hogan 8e97491277
gnu: dos2unix: Update to 7.4.3. 
* gnu/packages/textutils.scm (dos2unix): Update to 7.4.3.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2022-06-12 02:00:00 +02:00
Greg Hogan 142d136abd
gnu: htop: Update to 3.2.1. 
* gnu/packages/admin.scm (htop): Update to 3.2.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2022-06-12 02:00:00 +02:00
Greg Hogan ad05cb6a3c
gnu: ccache: Update to 4.6.1. 
* gnu/packages/ccache.scm (ccache): Update to 4.6.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2022-06-12 02:00:00 +02:00
Maxim Cournoyer 4e93ca70da
doc: Document how to repair Guix System from a chroot. 
* doc/guix.texi (System Troubleshooting Tips): New chapter.
 2022-06-14 15:19:35 -04:00
Maxim Cournoyer a860a5fa95
services: dbus: Add a VERBOSE? configuration option. 
* gnu/services/dbus.scm (<dbus-configuration>)[verbose?]: New field.
(dbus-shepherd-service): Use it.
(dbus-service)[verbose?]: Add argument and update doc.
* doc/guix.texi (Desktop Services): Document it.
 2022-06-14 14:23:21 -04:00
Maxim Cournoyer 3aaf52a129
gnu: Add dbus-verbose. 
* gnu/packages/glib.scm (dbus-verbose): New variable.
 2022-06-14 14:23:21 -04:00
Liliana Marie Prikler 330d2778a9
gnu: komikku: Update to 0.39.0. 
* gnu/packages/gnome.scm (komikku): Update to 0.39.0.
 2022-06-14 19:01:33 +02:00
Liliana Marie Prikler 391544a596
gnu: webkitgtk: Update to 2.36.3. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.36.3.
 2022-06-14 19:01:29 +02:00
Maxim Cournoyer 3dd32e76b0
gnu: h-client: Fetch source from Savannah again. 
* gnu/packages/hardware.scm (h-client)[source]: Update URL and associated
comment.
 2022-06-14 11:56:03 -04:00
Guillaume Le Vaillant 99c43cf344
gnu: cl-fof: Update to 0.2.0-1.522879e. 
* gnu/packages/lisp-xyz.scm (sbcl-fof): Update to 0.2.0-1.522879e.
  [inputs]: Sort inputs.
  [arguments]: Remove 'fix-build' phase.
 2022-06-14 16:18:07 +02:00
Guillaume Le Vaillant d1f3bba66c
gnu: cl-dexador: Remove input labels. 
* gnu/packages/lisp-xyz.scm (sbcl-dexador)[inputs, native-inputs]: Remove
  labels and sort inputs.
 2022-06-14 15:54:09 +02:00
André A. Gomes 893fc788fb
gnu: cl-dexador: Update to 0.9.15-1.74a233e. 
* gnu/packages/lisp-xyz.scm (sbcl-dexador): Update to 0.9.15-1.74a233e.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:53:20 +02:00
Guillaume Le Vaillant 0fd660a2b2
gnu: cl-fof: Fix build with recent cl-serapeum. 
* gnu/packages/lisp-xyz.scm (sbcl-fof)[inputs]: Remove labels and add
  sbcl-named-readtables.
  [arguments]: Add 'fix-build' phase.
 2022-06-14 15:38:21 +02:00
Paul A. Patience 50b6377bc4
gnu: cl-serapeum: Update to 0.0.0-7.d2150c6. 
* gnu/packages/lisp-xyz.scm (sbcl-serapeum): Update to 0.0.0-7.d2150c6.
  [inputs]: Remove sbcl-named-readtables and sbcl-fare-quasiquote.
  Add sbcl-introspect-environment and sbcl-trivial-cltl2.
  [native-inputs]: Add sbcl-atomics.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:20:47 +02:00
Paul A. Patience f11b6ac9ac
gnu: cl-serapeum: Use G-expressions. 
* gnu/packages/lisp-xyz.scm (sbcl-serapeum)[arguments]: Use G-expressions and
  simplify the 'disable-failing-tests' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:15:42 +02:00
Paul A. Patience 240ac3b75c
gnu: cl-serapeum: Remove input labels. 
* gnu/packages/lisp-xyz.scm (sbcl-serapeum)[inputs, native-inputs]: Remove
  labels.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:14:24 +02:00
Arun Isaac 6f75565b4e
gnu: python-httpx: Update to 0.23.0. 
* gnu/packages/python-web.scm (python-httpx): Update to 0.23.0.
 2022-06-14 18:06:24 +05:30
Arun Isaac 2ac81f482a
gnu: python-httpcore: Update to 0.15.0. 
* gnu/packages/python-web.scm (python-httpcore): Update to 0.15.0.
[arguments]: Override asyncio_mode when invoking pytest in check phase.
 2022-06-14 18:06:20 +05:30
Tobias Geerinckx-Rice 2682b12ca4
gnu: dovecot: Update to 2.3.19.1. 
* gnu/packages/mail.scm (dovecot): Update to 2.3.19.1.
 2022-06-12 02:00:09 +02:00
Tobias Geerinckx-Rice e1b647fdf6
gnu: sudo: Update to 1.9.11p2. 
* gnu/packages/admin.scm (sudo): Update to 1.9.11p2.
 2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice 998d9a6183
pull: Fix typo in error message. 
* guix/scripts/pull.scm (guix-pull): Report the right user name/ID.
 2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice 88b098d9ba
gnu: python-parted: Rename to python-pyparted. 
* gnu/packages/disk.scm (python-pyparted): New variable renamed from…
(python-parted): …this, to better follow the package naming guidelines.
Redefine it using DEPRECATED-PACKAGE.
 2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice 67ff676792
gnu: python-parted: Update to 3.12.0. 
* gnu/packages/disk.scm (python-parted): Update to 3.12.0.
[arguments]: Run the default 'check phase at the default time.
 2022-06-12 02:00:00 +02:00
Vagrant Cascadian 824f2afcf0
gnu: autogen: Build reproducibly. 
* gnu/packages/autogen.scm (autogen)[arguments]: Add
  'use-numeric-ids-in-tarball phase.
 2022-06-13 20:56:47 -07:00
Vagrant Cascadian 3691e37eb1
gnu: autogen: Build with guile 3.0. 
* gnu/packages/autogen.scm (autogen)[arguments]: Add 'support-guile-3.0 phase.
  [inputs]: Remove guile-2.2 and add guile-3.0.
 2022-06-13 20:56:30 -07:00
Artyom V. Poptsov 4ff9f1689d
gnu: java-commons-lang3: Update to 3.12.0 
* gnu/packages/java.scm (java-commons-lang3): Update to 3.12.0.
* gnu/packages/patches/java-commons-lang-fix-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2022-06-13 22:49:13 +02:00
Andreas Enge f2ed82eb53
gnu: sollya: Update to 8.0. 
* gnu/packages/algebra.scm (sollya): Update to 8.0.
 2022-06-13 17:50:28 +02:00
Andreas Enge 89fefe2fd4
gnu: python-fpylll: Update to 0.5.7. 
* gnu/packages/algebra.scm (python-fpylll): Update to 0.5.7.
  [source]: Revert from git to pypi.
 2022-06-13 17:40:30 +02:00
Andreas Enge 5dec5f65ec
gnu: fplll: Update to 5.4.2. 
* gnu/packages/algebra.scm (fplll): Update to 5.4.2.
[source]: Remove patch; for unknown reasons the package now compiles
without it.
* gnu/packages/patches/fplll-std-fenv.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister patch.
 2022-06-13 17:16:54 +02:00
Ricardo Wurmus 35124d0087
gnu: r-quantpsyc: Update to 1.6. 
* gnu/packages/statistics.scm (r-quantpsyc): Update to 1.6.
[propagated-inputs]: Add r-dplyr and r-purrr.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus 789c7ab505
gnu: r-mnormt: Update to 2.1.0. 
* gnu/packages/statistics.scm (r-mnormt): Update to 2.1.0.
[propagated-inputs]: Remove r-tmvnsim.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus 3d7adc9b21
gnu: r-flexmix: Update to 2.3-18. 
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-18.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus 5fe57da316
gnu: r-r-oo: Update to 1.25.0. 
* gnu/packages/statistics.scm (r-r-oo): Update to 1.25.0.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus ed945c7732
gnu: r-e1071: Update to 1.7-11. 
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-11.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus 03aba54185
gnu: r-segmented: Update to 1.6-0. 
* gnu/packages/statistics.scm (r-segmented): Update to 1.6-0.
[propagated-inputs]: Add r-nlme.
 2022-06-13 15:24:30 +02:00