guix/gnu/packages
Ricardo Wurmus cbe8391d7c
gnu: Add mudskipper.
* gnu/packages/bioinformatics.scm (mudskipper): New variable.
2022-09-23 00:21:40 +02:00
..
aux-files
patches gnu: r-httpuv: Update to 1.6.6. 2022-09-20 17:02:09 +02:00
abduco.scm
abiword.scm
accessibility.scm gnu: Add espeakup. 2022-09-21 13:20:56 +02:00
acct.scm
acl.scm
ada.scm
admin.scm gnu: tree: Use https. 2022-09-20 13:57:57 +03:00
adns.scm
agda.scm
aidc.scm
algebra.scm gnu: gp2c: Update to 0.0.13. 2022-09-21 13:29:13 +02:00
android.scm
animation.scm
anthy.scm
antivirus.scm
apl.scm
apr.scm
arcan.scm
aspell.scm
assembly.scm
astronomy.scm gnu: Add python-ephem. 2022-09-21 22:07:27 +02:00
attr.scm
audio.scm gnu: catch-framework2: Rename variable to catch2. 2022-09-15 20:15:56 -04:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm
avahi.scm
avr-xyz.scm
avr.scm
axoloti.scm
backup.scm
barrier.scm
base.scm
bash.scm gnu: Add blesh. 2022-09-14 08:51:35 +01:00
batik.scm
bdw-gc.scm
benchmark.scm
bioconductor.scm gnu: r-activedriverwgs: Update to 1.2.0. 2022-09-20 17:02:09 +02:00
bioinformatics.scm gnu: Add mudskipper. 2022-09-23 00:21:40 +02:00
bison.scm
bittorrent.scm
boost.scm
bootloaders.scm gnu: u-boot-tools: Disable check for 100% coverage. 2022-09-15 16:53:07 +02:00
bootstrap.scm
bqn.scm
browser-extensions.scm
build-tools.scm gnu: Add meson-python. 2022-09-16 18:42:21 +02:00
busybox.scm
c.scm
calcurse.scm
calendar.scm gnu: gsimplecal: Update to 2.4.1. 2022-09-22 10:06:42 +02:00
ccache.scm
cdrom.scm
cedille.scm
certs.scm
check.scm gnu: catch-framework2: Rename variable to catch2. 2022-09-15 20:15:56 -04:00
chemistry.scm gnu: catch-framework2: Rename variable to catch2. 2022-09-15 20:15:56 -04:00
chez.scm
chicken.scm
chromium.scm gnu: ungoogled-chromium: Update to 105.0.5195.125-1. 2022-09-14 21:08:34 +02:00
ci.scm
cinnamon.scm
clojure.scm gnu: clojure-tools: Update to 1.11.1.1165. 2022-09-22 09:53:07 +08:00
cluster.scm
cmake.scm gnu: cmake: Update to 3.24.2. 2022-09-14 00:02:39 -04:00
cobol.scm
code.scm
commencement.scm
compression.scm
compton.scm
configuration-management.scm
conky.scm
connman.scm gnu: connman: Patch CVE-2022-32392, CVE-2022-32293. 2022-09-19 11:19:49 +03:00
containers.scm gnu: podman: Install shell completions. 2022-09-14 23:36:32 +02:00
convmv.scm
cook.scm
coq.scm gnu: coq: Update to 8.16.0. 2022-09-22 07:34:57 +02:00
cpio.scm
cpp.scm gnu: catch-framework2: Rename variable to catch2. 2022-09-15 20:15:56 -04:00
cppi.scm
cran.scm gnu: r-mlr3ordinal: Update to 0.1.0-9000-1.736e3a3. 2022-09-20 17:02:33 +02:00
crates-graphics.scm gnu: rust-winit-0.24: Add missing development inputs. 2022-09-23 00:21:39 +02:00
crates-gtk.scm gnu: Add comments to the bottom of a few more package modules. 2022-09-14 09:33:11 +01:00
crates-io.scm gnu: Add rust-libradicl-0.4. 2022-09-23 00:21:40 +02:00
cross-base.scm gnu: cross: Add default configure-flags. 2022-09-20 11:26:12 +03:00
crypto.scm gnu: Add keychain. 2022-09-22 09:56:31 +02:00
cryptsetup.scm
cups.scm gnu: cups-pk-helper: Replace polkit with polkit-duktape. 2022-09-13 00:20:37 -04:00
curl.scm
cvassistant.scm
cybersecurity.scm
cyrus-sasl.scm
darwin.scm
databases.scm gnu: apache-arrow: Update to 9.0.0. 2022-09-20 17:02:08 +02:00
datamash.scm
datastructures.scm
dav.scm
dbm.scm
dc.scm
debian.scm
debug.scm
dejagnu.scm
dezyne.scm gnu: dezyne: Update to 2.16.1. 2022-09-13 15:08:41 +02:00
dhall.scm
dico.scm
dictionaries.scm
diffoscope.scm
digest.scm
direct-connect.scm
disk.scm
display-managers.scm
distributed.scm
django.scm
djvu.scm
dlang.scm
dns.scm
docbook.scm
docker.scm
documentation.scm
dunst.scm
dvtm.scm
easyrpg.scm
ebook.scm gnu: Add shirah. 2022-09-16 12:21:32 +02:00
ed.scm
education.scm gnu: Add mazo. 2022-09-16 12:10:10 +02:00
efi.scm
electronics.scm
elf.scm
elixir.scm
elm.scm
emacs-xyz.scm gnu: emacs-rustic: Update to 3.4. 2022-09-20 21:22:07 +02:00
emacs.scm gnu: emacs-next-pgtk: Inherit patches from emacs-next. 2022-09-19 07:23:41 +03:00
embedded.scm gnu: stcgal: Patch tests for PyYAML 6. 2022-09-14 21:08:34 +02:00
emulators.scm gnu: sameboy: Update to 0.15.5. 2022-09-09 21:35:22 +02:00
enchant.scm gnu: catch-framework2: Rename variable to catch2. 2022-09-15 20:15:56 -04:00
engineering.scm gnu: catch-framework2: Rename variable to catch2. 2022-09-15 20:15:56 -04:00
enlightenment.scm gnu: enlightenment: Update to 0.25.4. 2022-09-19 11:12:44 +03:00
entr.scm
erlang.scm
esolangs.scm gnu: Add folders. 2022-09-14 20:45:33 +02:00
fabric-management.scm
fcitx.scm gnu: fcitx: Update to 4.2.9.9, use gexps and remove input labels. 2022-09-12 20:51:22 -04:00
fcitx5.scm
figlet.scm
file-systems.scm
file.scm
finance.scm gnu: monero-gui: Update to 0.18.1.1. 2022-09-22 11:40:10 +02:00
firmware.scm
flashing-tools.scm
flex.scm
fltk.scm
fonts.scm gnu: font-ibm-plex: Update to 6.1.1. 2022-09-19 03:10:55 +05:30
fontutils.scm gnu: python-ufo2ft: Don't use pytest-runner. 2022-09-18 16:18:34 +02:00
forth.scm
fpga.scm gnu: Add openfpgaloader. 2022-09-16 13:17:08 +02:00
freedesktop.scm gnu: colord-gtk: Update to 0.3.0. 2022-09-13 00:20:39 -04:00
freeipmi.scm
fribidi.scm
ftp.scm
fvwm.scm
game-development.scm
games.scm gnu: Add tetzle. 2022-09-22 10:17:42 +02:00
gawk.scm
gcal.scm
gcc.scm gnu: libgccjit: Build multiple versions. 2022-09-11 15:46:31 +02:00
gd.scm
gdb.scm
genealogy.scm
genimage.scm
geo.scm gnu: saga: Fix build with newer libHaru. 2022-09-17 19:09:45 +02:00
gettext.scm
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm
glib.scm gnu: Add glib-next. 2022-09-13 02:04:39 -04:00
gnome-xyz.scm gnu: gnome-shell-extension-noannoyance: Update to 16-1-b759d10f. 2022-09-18 19:19:42 +02:00
gnome.scm gnu: Add gnome-console. 2022-09-21 06:26:56 +02:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm gnu: gnucash: Update to 4.11 and use gexps. 2022-09-13 02:04:57 -04:00
gnunet.scm
gnupg.scm
gnustep.scm
gnuzilla.scm gnu: icedove: Update to 91.13.1 [security fixes]. 2022-09-22 21:00:24 +02:00
gobby.scm
golang.scm gnu: Add go-github-com-goccy-go-json. 2022-09-10 11:32:47 +01:00
gperf.scm
gpodder.scm
gps.scm
graph.scm
graphics.scm
graphviz.scm
groff.scm
groovy.scm
gsasl.scm
gstreamer.scm
gtk.scm gnu: pango-next: Fix source URL. 2022-09-15 13:28:11 -04:00
guile-wm.scm
guile-xyz.scm gnu: gtksourceview: Update to 5.5.1. 2022-09-13 00:20:38 -04:00
guile.scm
gv.scm
gxmessage.scm
hardware.scm
haskell-apps.scm
haskell-check.scm
haskell-crypto.scm
haskell-web.scm
haskell-xyz.scm gnu: Add ghc-ansi2html. 2022-09-12 14:22:50 +01:00
haskell.scm
haxe.scm
heads.scm
hexedit.scm
hugs.scm
hunspell.scm
hurd.scm
hyperledger.scm
i2p.scm
ibus.scm gnu: ibus: Update to 1.5.27, use gexps and remove input labels. 2022-09-13 00:20:34 -04:00
icu4c.scm
idris.scm
idutils.scm
image-processing.scm gnu: vtk: Use system libHaru. 2022-09-17 19:09:45 +02:00
image-viewers.scm
image.scm
imagemagick.scm gnu: graphicsmagick: Use G-expression. 2022-09-09 23:00:21 +02:00
inklingreader.scm
inkscape.scm
installers.scm
instrumentation.scm gnu: lttng-tools: Update to 2.13.8. 2022-09-19 09:07:18 +02:00
ipfs.scm gnu: go-ipfs: Install bash completion. 2022-09-14 23:36:32 +02:00
irc.scm
irods.scm gnu: catch-framework2: Rename variable to catch2. 2022-09-15 20:15:56 -04:00
iso-codes.scm
jami.scm
java-compression.scm
java-graphics.scm
java-maths.scm
java.scm gnu: Add java-argparse4j. 2022-09-19 15:43:28 +02:00
javascript.scm
jemalloc.scm
jose.scm
jrnl.scm
julia-jll.scm
julia-xyz.scm gnu: Add comments to the bottom of a few package modules. 2022-09-10 10:45:27 +01:00
julia.scm
jupyter.scm
kawa.scm
kde-frameworks.scm
kde-games.scm
kde-internet.scm
kde-multimedia.scm
kde-pim.scm
kde-plasma.scm
kde-systemtools.scm
kde-utils.scm
kde.scm
kerberos.scm
key-mon.scm
kodi.scm
language.scm
ld-wrapper.in
lean.scm
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm gnu: Add idevicerestore. 2022-09-22 21:33:38 +02:00
license.scm
lighting.scm
linphone.scm
linux.scm gnu: linux-libre 4.9: Update to 4.9.239. 2022-09-21 22:25:51 -04:00
lirc.scm
lisp-check.scm gnu: sbcl-lisp-unit2: Update to 0.9.4. 2022-09-22 09:28:43 +02:00
lisp-xyz.scm gnu: Add cl-bubble-operator-upwards. 2022-09-19 11:11:56 +02:00
lisp.scm gnu: txr: Update to 282. 2022-09-18 18:52:28 +02:00
llvm.scm
logging.scm
logo.scm
loko.scm
lout.scm
lsof.scm
lua.scm gnu: luajit: Remove riscv64-linux from supported-systems. 2022-09-19 10:25:05 +03:00
lxde.scm gnu: lxsession: Use polkit-duktape. 2022-09-13 00:20:36 -04:00
lxqt.scm
m4.scm
machine-learning.scm gnu: guile-aiscm-next: Deprecate in favor of guile-aiscm. 2022-09-20 23:57:18 +02:00
magic-wormhole.scm
mail.scm
make-bootstrap.scm
man.scm
markup.scm
marst.scm
mastodon.scm
mate.scm
maths.scm gnu: lablgtk3: Update to 3.1.2. 2022-09-22 07:34:02 +02:00
matrix.scm
maven-parent-pom.scm
maven.scm gnu: maven-slf4j-provider: Fix style. 2022-09-21 09:07:59 +02:00
mc.scm
mcrypt.scm
medical.scm
mercury.scm
mes.scm
messaging.scm gnu: gajim: Fix gtksourceview dependency. 2022-09-17 11:22:41 -04:00
microcom.scm
minetest.scm
mingw.scm
moe.scm
monitoring.scm gnu: python-pyabbix: Update to 1.2.1. 2022-09-15 16:53:07 +02:00
moreutils.scm
motti.scm
mp3.scm
mpd.scm gnu: Add mpdevil. 2022-09-10 17:23:32 +02:00
mpi.scm
mtools.scm
multiprecision.scm
music.scm gnu: Add comments to the bottom of a few more package modules. 2022-09-14 09:33:11 +01:00
musl.scm
myrddin.scm
nano.scm
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: catch-framework2: Rename variable to catch2. 2022-09-15 20:15:56 -04:00
nfs.scm gnu: nfs-utils: Remove unused input. 2022-09-16 18:42:20 +02:00
nickle.scm
nicotine.scm
nim.scm
ninja.scm
node-xyz.scm
node.scm
notcurses.scm
noweb.scm
nss.scm
ntp.scm gnu: Explicitly use OpenSSL 1.1 in packages that don't support 3.0. 2022-09-18 16:18:35 +02:00
nutrition.scm
nvi.scm
ocaml.scm gnu: ocaml-uucp: Update to 15.0.0. 2022-09-22 07:37:11 +02:00
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm
opencog.scm
openkinect.scm
openldap.scm
openpgp.scm
openstack.scm
orange.scm
orpheus.scm
ots.scm
package-management.scm
pantheon.scm
parallel.scm
pascal.scm
password-utils.scm
patchutils.scm gnu: Add wiggle. 2022-09-11 12:35:29 +02:00
patool.scm
pciutils.scm
pcre.scm
pdf.scm gnu: zathura: Remove input labels. 2022-09-22 10:45:19 +03:00
pem.scm
pep.scm
perl-check.scm
perl-compression.scm
perl-maths.scm
perl-web.scm
perl.scm gnu: Add comments to the bottom of a few package modules. 2022-09-10 10:45:27 +01:00
perl6.scm
phabricator.scm
photo.scm
php.scm gnu: Explicitly use OpenSSL 1.1 in packages that don't support 3.0. 2022-09-18 16:18:35 +02:00
piet.scm
pikchr.scm
pkg-config.scm gnu: Add pkgconf. 2022-09-13 02:04:59 -04:00
plan9.scm
plotutils.scm gnu: asymptote: Update to 2.83. 2022-09-18 13:28:41 +02:00
poedit.scm
polkit.scm
popt.scm
presentation.scm
pretty-print.scm
printers.scm
profiling.scm
prolog.scm
protobuf.scm
pth.scm
pulseaudio.scm
pumpio.scm
pure.scm
purescript.scm
pv.scm
python-build.scm
python-check.scm gnu: python-pytest-benchmark: Update to 3.4.1. 2022-09-09 23:00:21 +02:00
python-compression.scm
python-crypto.scm
python-science.scm gnu: python-pandas: Update to 1.4.4. 2022-09-18 16:18:36 +02:00
python-web.scm gnu: python-uvloop: Disable flaky test. 2022-09-11 23:41:43 +02:00
python-xyz.scm gnu: python-cython: Add 0.29.32. 2022-09-18 16:18:35 +02:00
python.scm
qt.scm gnu: Add comments to the bottom of a few more package modules. 2022-09-14 09:33:11 +01:00
racket.scm
radio.scm
ragel.scm
rails.scm
raspberry-pi.scm
ratpoison.scm
rcm.scm
rdesktop.scm
rdf.scm
re2c.scm
readline.scm
rednotebook.scm
regex.scm
robotics.scm
rocm.scm
rpc.scm
rpm.scm
rrdtool.scm
rsync.scm gnu: rsync: Update to 3.2.6. 2022-09-14 23:36:31 +02:00
ruby.scm gnu: Add comments to the bottom of a few package modules. 2022-09-10 10:45:27 +01:00
rush.scm
rust-apps.scm gnu: Explicitly use OpenSSL 1.1 in more packages. 2022-09-09 23:00:22 +02:00
rust.scm
sagemath.scm
samba.scm
sawfish.scm
scanner.scm
scheme.scm
screen.scm
scribus.scm
scsi.scm
sdl.scm gnu: sdl2: Update to 2.24.0, use gexps and remove input labels. 2022-09-13 00:20:33 -04:00
search.scm gnu: recoll: Update to 1.32.7. 2022-09-11 16:43:31 +02:00
security-token.scm gnu: catch-framework2: Rename variable to catch2. 2022-09-15 20:15:56 -04:00
selinux.scm
sequoia.scm
serialization.scm
serveez.scm
shells.scm gnu: xonsh: Update to 0.13.3. 2022-09-22 10:02:38 +08:00
shellutils.scm gnu: Add grml-zsh-config. 2022-09-12 14:22:50 +01:00
simh.scm
simulation.scm gnu: catch-framework2: Rename variable to catch2. 2022-09-15 20:15:56 -04:00
skarnet.scm
skribilo.scm
slang.scm
smalltalk.scm
sml.scm
solidity.scm
speech.scm
sphinx.scm gnu: python-sphinx-theme-builder: Update to 0.2.0b1. 2022-09-11 19:43:16 +02:00
spice.scm gnu: virt-viewer: Update to 11.0 and enable more features. 2022-09-15 22:39:12 -04:00
spreadsheet.scm
sqlite.scm
squirrel.scm
ssh.scm
sssd.scm
stalonetray.scm
statistics.scm gnu: r-desctools: Update to 0.99.46. 2022-09-20 17:02:33 +02:00
stb.scm
stenography.scm
storage.scm
suckless.scm
swig.scm
sync.scm
syncthing.scm
syndication.scm
synergy.scm
task-management.scm
task-runners.scm
tbb.scm
tcl.scm
telegram.scm gnu: telegram-desktop: Use API ID from Snap builds. 2022-09-21 06:27:23 +02:00
telephony.scm gnu: mumble: Update to 1.4.274. 2022-09-10 17:23:32 +02:00
terminals.scm
terraform.scm
tex.scm gnu: texlive-setspace: Add 'license' field. 2022-09-14 00:14:51 +02:00
texinfo.scm
text-editors.scm
textutils.scm gnu: Add txt2tags. 2022-09-12 14:22:49 +01:00
time.scm
tls.scm
tmux.scm
toolkits.scm
tor.scm
toys.scm
tryton.scm
tv.scm
uglifyjs.scm
uml.scm gnu: plantuml: Update to 1.2022.7. 2022-09-11 16:43:31 +02:00
unicode.scm
unrtf.scm
upnp.scm
usb-modeswitch.scm
uucp.scm
valgrind.scm
version-control.scm gnu: mercurial: Update to 6.2.2. 2022-09-11 19:43:15 +02:00
video.scm gnu: celluloid: Fix build. 2022-09-16 12:35:13 +02:00
vim.scm gnu: vifm: Update to 0.12.1. 2022-09-22 10:45:16 +03:00
virtualization.scm gnu: virt-manager: Use gtksourceview@4. 2022-09-16 12:33:28 +02:00
vlang.scm
vnc.scm
vpn.scm
vulkan.scm
w3m.scm
wdiff.scm
weather.scm
web-browsers.scm
web.scm gnu: hitch: Update to 1.7.3. 2022-09-16 18:42:20 +02:00
webkit.scm gnu: Add webkitgtk-next. 2022-09-13 02:04:56 -04:00
wget.scm
wine.scm
wireservice.scm
wm.scm gnu: Add sbcl-stumpwm-pamixer. 2022-09-20 09:15:44 +02:00
wordnet.scm
wv.scm
wxwidgets.scm
xdisorg.scm gnu: catch-framework2: Rename variable to catch2. 2022-09-15 20:15:56 -04:00
xfce.scm gnu: xfce4-places-plugin: Update to 1.8.2. 2022-09-22 09:44:40 +08:00
xfig.scm
xiph.scm
xml.scm
xnee.scm
xorg.scm gnu: xvfb-run: Update to 1.20.11-1. 2022-09-12 20:51:23 -04:00
zig.scm
zile.scm
zwave.scm