guix/gnu/packages
Ricardo Wurmus 7d69eb77b6
gnu: r-beachmat: Update to 2.18.1.
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.18.1.

Change-Id: I854c4c21cad66e3fb2bfe63fe01c31c3aff7d109
2024-02-26 13:03:14 +01:00
..
aux-files gnu: renpy: Update to 8.2.0. 2024-02-25 09:32:49 +01:00
patches gnu: librime: Update to 1.10.0. 2024-02-26 19:20:39 +08:00
abduco.scm
abiword.scm
accessibility.scm
acct.scm
acl.scm
ada.scm
admin.scm gnu: Add rdfind. 2024-02-20 10:57:17 +01:00
adns.scm
agda.scm
aidc.scm
algebra.scm
android.scm gnu: Add emacs-fdroid. 2024-02-18 15:56:05 +01:00
animation.scm
anthy.scm
antivirus.scm
apl.scm
apparmor.scm
apple.scm
apr.scm
arcan.scm
aspell.scm
assembly.scm
astronomy.scm
attr.scm
audio.scm gnu: Add omins-lv2. 2024-02-25 13:14:21 +01:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm
avahi.scm
avr-xyz.scm
avr.scm
axoloti.scm
backup.scm gnu: python-ruamel-yaml: Update to 0.18.6. 2024-02-22 13:02:42 +00:00
barrier.scm
base.scm
bash.scm
batik.scm
bdw-gc.scm
benchmark.scm
bioconductor.scm gnu: r-beachmat: Update to 2.18.1. 2024-02-26 13:03:14 +01:00
bioinformatics.scm gnu: cwltool: Update to 3.1.20240112164112. 2024-02-22 13:02:43 +00:00
bison.scm
bittorrent.scm
books.scm
boost.scm
bootloaders.scm
bootstrap.scm
bqn.scm
browser-extensions.scm gnu: ublock-origin: Update to 1.56.0. 2024-02-21 01:56:33 +01:00
build-tools.scm
busybox.scm
c.scm gnu: tinydir: Update to 1.2.6. 2024-02-13 11:04:47 +00:00
calcurse.scm
calendar.scm
ccache.scm
cdrom.scm
cedille.scm
certs.scm
check.scm gnu: Add python-pytest-tornado5. 2024-02-17 21:13:01 +00:00
chemistry.scm gnu: rdkit: Update to 2023.09.4. 2024-02-13 11:04:48 +00:00
chez.scm
chicken.scm
chromium.scm
ci.scm gnu: laminar: Update chart.js input to 3.9.1. 2024-02-23 16:48:52 +00:00
cinnamon.scm
clifm.scm gnu: clifm: Update to 1.16 2024-02-09 22:19:08 +00:00
clojure.scm gnu: clojure-tools: Update to 1.11.1.1200. 2024-02-10 10:37:23 +00:00
cluster.scm
cmake.scm gnu: cmake: Adjust vim plugin directory. 2024-02-25 16:20:35 +02:00
cobol.scm gnu: gnucobol: Remove pregenerated files. 2024-02-22 18:39:55 +02:00
code.scm gnu: universal-ctags: Update to 6.1.20240218.0. 2024-02-22 11:57:37 +02:00
commencement.scm
compression.scm gnu: pigz: Update to 2.8. 2024-02-09 22:19:08 +00:00
compton.scm gnu: picom: Update to 11.2. 2024-02-14 15:53:37 -05:00
configuration-management.scm gnu: chezmoi: Update to 1.8.10. 2024-02-19 23:32:34 +00:00
conky.scm
connman.scm
containers.scm gnu: crun: Adjust package ideation. 2024-02-14 15:27:12 +00:00
convmv.scm
cook.scm
coq.scm
cpio.scm
cpp.scm gnu: fast-float: Update to 6.0.0. 2024-02-13 11:04:47 +00:00
cppi.scm
cran.scm gnu: r-rtweet: Update to 2.0.0. 2024-02-26 12:34:10 +01:00
crates-graphics.scm
crates-gtk.scm
crates-io.scm
cross-base.scm
cross-toolchain.scm
crypto.scm gnu: go-golang-org-x-crypto: Move to golang-build. 2024-02-13 14:33:16 +00:00
cryptsetup.scm
cups.scm
curl.scm gnu: go-golang-org-x-sys: Move to golang-build. 2024-02-13 14:19:05 +00:00
cvassistant.scm
cybersecurity.scm
cyrus-sasl.scm
darwin.scm
databases.scm gnu: apache-arrow: Update to 14.0.2. 2024-02-26 12:34:10 +01:00
datamash.scm
datastructures.scm
dav.scm
dbm.scm
dc.scm
debian.scm gnu: debootstrap: use trisquel-keyring. 2024-02-12 14:41:46 +02:00
debug.scm
dejagnu.scm
dezyne.scm
dhall.scm
dico.scm
dictionaries.scm
diffoscope.scm gnu: diffoscope: Update to 256 [security fixes]. 2024-02-09 13:35:06 -08:00
digest.scm
direct-connect.scm
disk.scm gnu: go-golang-org-x-term: Move to golang-build. 2024-02-13 14:33:15 +00:00
display-managers.scm
distributed.scm
django.scm
djvu.scm
dlang.scm
dns.scm
docbook.scm
docker.scm gnu: go-golang-org-x-sys: Move to golang-build. 2024-02-13 14:19:05 +00:00
documentation.scm
dvtm.scm
easyrpg.scm
ebook.scm
education.scm gnu: Add tagainijisho. 2024-02-22 16:12:22 +01:00
efi.scm
electronics.scm
elf.scm
elixir-xyz.scm
elixir.scm gnu: elixir: Set default value for MIX_REBAR3. 2024-02-19 17:00:47 +03:00
elm.scm
emacs-xyz.scm gnu: Add emacs-combobulate. 2024-02-25 10:02:19 +01:00
emacs.scm
embedded.scm gnu: propeller-load: Disable parallel building. 2024-02-19 14:09:45 +01:00
emulators.scm gnu: retroarch: Update to 1.17.0. 2024-02-13 11:32:14 +00:00
enchant.scm
engineering.scm gnu: poke: Adjust vim plugin directory. 2024-02-25 16:20:35 +02:00
enlightenment.scm
entr.scm
erlang.scm
esolangs.scm
fabric-management.scm
fcitx.scm
fcitx5.scm
figlet.scm
file-systems.scm gnu: Add snapper. 2024-02-18 15:50:47 +01:00
file.scm
finance.scm gnu: xmrig: Update to 6.21.0. 2024-02-24 10:07:18 +01:00
firmware.scm
flashing-tools.scm
flex.scm
fltk.scm
fonts.scm gnu: Add font-dongle. 2024-02-26 19:20:39 +08:00
fontutils.scm gnu: fcft: Enable shaping support. 2024-02-10 15:06:50 +00:00
forth.scm
fpga.scm gnu: nvc: Update to 1.11.3. 2024-02-10 01:52:00 +01:00
freedesktop.scm
freeipmi.scm
fribidi.scm
fsf.scm
ftp.scm
fvwm.scm
game-development.scm gnu: renpy: Update to 8.2.0. 2024-02-25 09:32:49 +01:00
games.scm gnu: 0ad-data: Make the package public but hidden. 2024-02-16 11:29:30 +01:00
gawk.scm
gcal.scm
gcc.scm gnu: gcc-4.8: Fix building. 2024-02-13 20:54:57 +02:00
gd.scm
gdb.scm
genealogy.scm
genimage.scm
geo.scm gnu: osm2pgsql: Update to 1.11.0. 2024-02-26 11:43:36 +01:00
gettext.scm
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm
glib.scm
gnome-xyz.scm
gnome.scm gnu: mutter: Disable one test when building for i686-linux. 2024-02-12 22:04:22 +01:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm
gnupg.scm gnu: gnupg: Fix cross-compilation. 2024-02-10 21:00:03 +01:00
gnustep.scm
gnuzilla.scm gnu: icecat: Update to 115.8.0-guix0-preview1 [security fixes]. 2024-02-20 09:42:41 -05:00
gobby.scm
golang-build.scm gnu: go-golang-org-x-net-html: Add missing input. 2024-02-19 23:32:31 +00:00
golang-check.scm gnu: go-github-com-alecthomas-assert-v2: Update to 2.5.0. 2024-02-19 23:32:33 +00:00
golang-compression.scm gnu: go-github.com-ulikunitz-xz: Move to golang-compression. 2024-02-13 14:33:17 +00:00
golang-crypto.scm gnu: Add go-github-com-golang-jwt-jwt-v5. 2024-02-19 23:32:32 +00:00
golang-web.scm gnu: Add go-github-com-google-go-github-v33. 2024-02-19 23:32:33 +00:00
golang-xyz.scm gnu: go-github-com-songmu-gitconfig: Fix build. 2024-02-19 23:32:33 +00:00
golang.scm gnu: Add go-github-com-bmatcuk-doublestar-v2. 2024-02-19 23:32:33 +00:00
gperf.scm
gpodder.scm
gps.scm gnu: gama: Update to 2.29. 2024-02-26 11:50:28 +01:00
graph.scm
graphics.scm
graphviz.scm
groff.scm
groovy.scm
gsasl.scm
gstreamer.scm
gtk.scm
guile-wm.scm
guile-xyz.scm gnu: haunt: Update to 0.3.0. 2024-02-19 10:13:38 -05:00
guile.scm gnu: Add guile-bzip2. 2024-02-12 21:25:55 -06:00
gv.scm
gxmessage.scm
hardware.scm
haskell-apps.scm
haskell-check.scm
haskell-crypto.scm
haskell-web.scm
haskell-xyz.scm
haskell.scm gnu: Add ghc-7.0. 2024-02-19 19:59:10 +02:00
haxe.scm
heads.scm
hexedit.scm
high-availability.scm gnu: go-github-com-bitly-go-hostpool: Move to golang-xyz. 2024-02-13 14:33:08 +00:00
hugs.scm
hunspell.scm
hurd.scm
hyperledger.scm
i2p.scm
ibus.scm gnu: librime: Update to 1.10.0. 2024-02-26 19:20:39 +08:00
icu4c.scm gnu: icu4c-73: Move it from gnuzilla.scm to icu4c.scm. 2024-02-16 14:56:27 +01:00
idris.scm
idutils.scm
image-processing.scm gnu: opencv: Update to 4.8.1. 2024-02-13 11:03:55 +00:00
image-viewers.scm gnu: ytfzf: Update to 2.6.2. 2024-02-14 16:14:06 -05:00
image.scm gnu: leptonica: Update to 1.84.1. 2024-02-24 11:14:46 +01:00
imagemagick.scm
inklingreader.scm
inkscape.scm
installers.scm
instrumentation.scm
ipfs.scm gnu: go-github-com-golang-snappy: Mmove to golang-compression. 2024-02-13 14:17:59 +00:00
irc.scm gnu: go-golang-org-x-sys: Move to golang-build. 2024-02-13 14:19:05 +00:00
irods.scm
iso-codes.scm
jami.scm
java-bootstrap.scm
java-compression.scm
java-graphics.scm
java-maths.scm
java-rdf.scm
java-xml.scm
java.scm gnu: jbr21: Update to 21.0.2b375.1. 2024-02-24 00:02:01 +01:00
javascript.scm
jemalloc.scm
jose.scm
julia-jll.scm
julia-xyz.scm
julia.scm
jupyter.scm
kawa.scm
kde-frameworks.scm
kde-games.scm
kde-internet.scm
kde-multimedia.scm
kde-pim.scm
kde-plasma.scm
kde-systemtools.scm
kde-utils.scm
kde.scm
kerberos.scm
kodi.scm
language.scm
ld-wrapper.in
lean.scm
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm
license.scm
lighting.scm
linphone.scm
linux.scm gnu: tlpui: Fix build. 2024-02-23 08:26:33 +01:00
lirc.scm
lisp-check.scm
lisp-xyz.scm gnu: sbcl-mcclim: Reformatting. 2024-02-17 12:54:10 +00:00
lisp.scm
llvm.scm gnu: lldb: Update to 17.0.6. 2024-02-10 15:06:50 +00:00
logging.scm
logo.scm
loko.scm
lout.scm
lsof.scm
lua.scm
lxde.scm
lxqt.scm
m4.scm
machine-learning.scm gnu: Add python-gymnasium. 2024-02-16 08:01:24 +01:00
magic-wormhole.scm
mail.scm gnu: Remove duplicate module import. 2024-02-22 10:25:03 +01:00
make-bootstrap.scm
man.scm
markup.scm
marst.scm
mastodon.scm
mate.scm
maths.scm gnu: arpack-ng: Update to 3.9.1. 2024-02-14 14:38:02 +01:00
matrix.scm
maven-parent-pom.scm
maven.scm
mc.scm
mcrypt.scm
medical.scm gnu: openmolar-1: Update to release 1.1.6-g81838c8 and partial runtime fix. 2024-02-10 22:54:05 +01:00
mercury.scm
mes.scm
messaging.scm gnu: go-golang-org-x-net: Move to golang-build. 2024-02-13 14:16:59 +00:00
microcom.scm
minetest.scm
mingw.scm
moe.scm gnu: moe: Update to 1.14. 2024-02-09 22:19:08 +00:00
mold.scm gnu: mold: Update to 2.4.0. 2024-02-21 12:05:00 -05:00
monitoring.scm gnu: batsignal: Update to 1.8.0. 2024-02-14 16:05:43 -05:00
moreutils.scm
motti.scm
mp3.scm
mpd.scm
mpi.scm
mtools.scm
multiprecision.scm
music.scm gnu: alsa-scarlett-gui: Use ungexp. 2024-02-20 20:49:15 +01:00
musl.scm
myrddin.scm
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: lcsync: Simplify package. 2024-02-24 20:18:00 +00:00
nfs.scm
nickle.scm
nicotine.scm
nim.scm
ninja.scm
node-xyz.scm gnu: node-serialport-parser-inter-byte-timeout: Move in order. 2024-02-21 20:16:22 +00:00
node.scm
notcurses.scm
noweb.scm
nss.scm
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm gnu: Add binsec. 2024-02-11 17:30:33 +01:00
ocr.scm gnu: ocrad: Update to 0.29 2024-02-10 13:31:51 +00:00
onc-rpc.scm
openbox.scm
opencl.scm
opencog.scm
openkinect.scm
openldap.scm
openpgp.scm
openstack.scm
orange.scm
orpheus.scm
ots.scm
package-management.scm gnu: python-ruamel-yaml: Update to 0.18.6. 2024-02-22 13:02:42 +00:00
pantheon.scm
parallel.scm gnu: parallel: Update to 20240122. 2024-02-11 12:20:53 +02:00
pascal.scm
password-utils.scm gnu: go-golang-org-x-sys: Move to golang-build. 2024-02-13 14:19:05 +00:00
patchutils.scm
patool.scm gnu: patool: Update to 2.1.1. 2024-02-09 22:19:09 +00:00
pciutils.scm
pcre.scm
pdf.scm gnu: mupdf: Update to 1.23.10. 2024-02-13 11:25:11 +00:00
pem.scm
pep.scm
perl-check.scm
perl-compression.scm
perl-maths.scm
perl-web.scm
perl.scm gnu: perl-5.6: Build with a newer gcc. 2024-02-19 19:59:04 +02:00
perl6.scm
phabricator.scm
photo.scm
php-xyz.scm
php.scm
piet.scm
pikchr.scm
pkg-config.scm
plan9.scm
plotutils.scm
poedit.scm
polkit.scm
popt.scm
potassco.scm
presentation.scm
pretty-print.scm
printers.scm
profiling.scm
prolog.scm
protobuf.scm
pth.scm
pulseaudio.scm
pumpio.scm
pure.scm
purescript.scm
pv.scm
pypy.scm
python-build.scm
python-check.scm gnu: python-pytest-socket: Simplify package, enable tests. 2024-02-11 21:03:06 +00:00
python-compression.scm
python-crypto.scm
python-science.scm gnu: Add python-scikit-opt. 2024-02-10 22:51:59 +01:00
python-web.scm gnu: Add python-cloud-init. 2024-02-19 14:53:26 +01:00
python-xyz.scm gnu: python-ruamel-yaml: Update to 0.18.6. 2024-02-22 13:02:42 +00:00
python.scm
qt.scm
quantum.scm
racket.scm
radio.scm gnu: Add dumpvdl2. 2024-02-15 23:10:42 +01:00
ragel.scm
rails.scm
raspberry-pi.scm
ratpoison.scm
rcm.scm
rdesktop.scm
rdf.scm
re2c.scm
readline.scm
rednotebook.scm
regex.scm
robotics.scm
rocm.scm
rpc.scm
rpm.scm
rrdtool.scm gnu: rrdtool: Remove unneeded input. 2024-02-12 14:41:46 +02:00
rsync.scm
ruby.scm gnu: Add ruby-fog-libvirt. 2024-02-24 16:44:02 +01:00
rush.scm
rust-apps.scm
rust.scm
sagemath.scm
samba.scm
sawfish.scm
scanner.scm gnu: sane-backends-minimal: Update to 1.2.1. 2024-02-16 13:40:19 +01:00
scheme.scm
screen.scm
scribus.scm
scsi.scm
sdl.scm
search.scm gnu: plocate: Update to 1.1.22. 2024-02-14 16:13:01 -05:00
security-token.scm
selinux.scm
sequoia.scm
serialization.scm gnu: python-ruamel-yaml: Update to 0.18.6. 2024-02-22 13:02:42 +00:00
serveez.scm
shells.scm
shellutils.scm gnu: go-golang-org-x-mod: Move to golang-build. 2024-02-13 14:33:15 +00:00
simh.scm
simulation.scm gnu: emulators: Adjust copyright header. 2024-02-10 15:58:51 +00:00
skarnet.scm gnu: execline: Correct symlink permissions on the hurd. 2024-02-10 10:35:48 +00:00
skribilo.scm
slang.scm
smalltalk.scm
sml.scm
solidity.scm
sourcehut.scm
speech.scm
sphinx.scm
spice.scm gnu: spice: Update to 0.15.2. 2024-02-22 16:12:22 +01:00
spreadsheet.scm
sqlite.scm
squirrel.scm
ssh.scm
sssd.scm gnu: sssd: Update to 2.9.4. 2024-02-10 13:29:37 +00:00
statistics.scm gnu: r-mclust: Update to 6.1. 2024-02-26 12:34:11 +01:00
stb.scm
stenography.scm
storage.scm
suckless.scm
sugar.scm gnu: Add sugar-physics-activity. 2024-02-20 08:45:39 +01:00
swig.scm
sycl.scm
sync.scm
syncthing.scm gnu: go-golang-org-x-sys: Move to golang-build. 2024-02-13 14:19:05 +00:00
syndication.scm
synergy.scm
task-management.scm
task-runners.scm
tbb.scm
tcl.scm
telegram.scm
telephony.scm
terminals.scm gnu: Add roxterm. 2024-02-23 22:05:38 +01:00
terraform.scm
tex.scm
texinfo.scm
texlive.scm
text-editors.scm gnu: parinfer-rust: Add phase to install editor plugins. 2024-02-11 12:14:09 +02:00
textutils.scm gnu: go-golang-org-x-sys: Move to golang-build. 2024-02-13 14:19:05 +00:00
time.scm
tls.scm
tmux.scm
toolkits.scm
tor-browsers.scm gnu: mullvadbrowser: Update to 13.0.10. 2024-02-21 02:55:40 +01:00
tor.scm
toys.scm gnu: Add xfishtank. 2024-02-22 16:12:21 +01:00
tree-sitter.scm
tryton.scm
tv.scm
uglifyjs.scm
uml.scm
unicode.scm
unrtf.scm
upnp.scm
usb-modeswitch.scm
uucp.scm gnu: go-github-com-klauspost-compress: Move to golang-compression. 2024-02-13 14:33:16 +00:00
valgrind.scm
version-control.scm gnu: git-filter-repo: Update to 2.38.0. 2024-02-25 00:07:30 +08:00
video.scm gnu: ani-cli: Update to 4.8. 2024-02-16 13:17:46 +01:00
vim.scm gnu: Add neovim-dispatch. 2024-02-22 11:57:38 +02:00
virtualization.scm gnu: Add ruby-vagrant-spec-helper-basic. 2024-02-24 16:44:01 +01:00
vlang.scm
vnc.scm gnu: tigervnc-client: Update to 1.13.1. 2024-02-22 07:49:17 -05:00
vpn.scm gnu: go-golang-org-x-sys: Move to golang-build. 2024-02-13 14:19:05 +00:00
vulkan.scm
w3m.scm
wdiff.scm
weather.scm gnu: go-golang-org-x-sys: Move to golang-build. 2024-02-13 14:19:05 +00:00
web-browsers.scm gnu: nyxt: Update to 3.11.3. 2024-02-21 11:10:52 +01:00
web.scm gnu: nghttp3: Update to 1.2.0. 2024-02-20 20:53:30 +01:00
webkit.scm
wget.scm
wine.scm
wireservice.scm
wm.scm gnu: labwc: Update to 0.7.0. 2024-02-19 22:21:32 -05:00
wordnet.scm
wv.scm
wxwidgets.scm
xdisorg.scm gnu: bemenu: Install man pages 2024-02-18 16:10:19 +01:00
xfce.scm
xfig.scm
xiph.scm
xml.scm
xnee.scm
xorg.scm
zig-xyz.scm gnu: Update wlroots to 0.17.1. 2024-02-19 22:19:44 -05:00
zig.scm
zile.scm
zwave.scm