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Author SHA1 Message Date
Ludovic Courtès fa2d94b5e3
gnu: python-onnx: Rename to "onnx". 
* gnu/packages/machine-learning.scm (python-onnx): Rename to...
(onnx): ... this, and change 'name' field accordingly.
(python-onnx): New variable.
* gnu/packages/patches/python-onnx-shared-libraries.patch: Rename to...
* gnu/packages/patches/onnx-shared-libraries.patch: ... this.
* gnu/packages/patches/python-onnx-use-system-googletest.patch: Rename
to...
* gnu/packages/patches/onnx-use-system-googletest.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2021-07-31 01:03:24 +02:00
Ludovic Courtès 2b55f914c3
gnu: python-onnx: Install libonnx.so and libonnx_proto.so. 
* gnu/packages/patches/python-onnx-shared-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/machine-learning.scm (python-onnx)[source]: Use it.
[arguments]: New field.
 2021-07-31 01:03:23 +02:00
Ludovic Courtès bb5b6b09dc
gnu: python-onnx: Delete bundled software. 
* gnu/packages/machine-learning.scm (python-onnx)[source]: Delete
the 'third_party' directory.
 2021-07-31 01:03:23 +02:00
Ludovic Courtès 3ac3ca367a
gnu: python-onnx: Move comment to the patch header. 
* gnu/packages/machine-learning.scm (python-onnx): Move patch comment to...
* gnu/packages/patches/python-onnx-use-system-googletest.patch: ... here.
 2021-07-31 01:03:23 +02:00
Ludovic Courtès 5f9dc326d9
gnu: python-onnx: Update to 1.9.0. 
* gnu/packages/machine-learning.scm (python-onnx): Update to 1.9.0.
 2021-07-31 01:03:23 +02:00
Ricardo Wurmus 721e380764
gnu: liquidsfz: Use fixed libsndfile. 
* gnu/packages/music.scm (liquidsfz)[inputs]: Replace libsndfile with
libsndfile/fixed.
 2021-07-30 22:34:45 +02:00
Ricardo Wurmus 4c013867b6
gnu: Add libsndfile/fixed. 
* gnu/packages/pulseaudio.scm (libsndfile/fixed): New variable.
 2021-07-30 22:34:45 +02:00
Efraim Flashner 7041abe38a
gnu: parallel: Update to 20210722. 
* gnu/packages/parallel.scm (parallel): Update to 20210722.
 2021-07-30 19:17:52 +03:00
Marius Bakke 730f11ba92
gnu: python-elasticsearch: Update to 7.13.4. 
* gnu/packages/python-web.scm (python-elasticsearch): Update to 7.13.4.
[native-inputs]: Remove.
[propagated-inputs]: Add PYTHON-CERTIFI.
 2021-07-30 16:18:41 +02:00
Leo Prikler 311cc4ee65
gnu: openttd-opensmx: Update to 0.4.0. 
* gnu/packages/games.scm (openttd-opensmx): Update to 0.4.0.
[native-inputs]: Add tar.
[#:make-flags]: Drop INSTALL_DIR.  Add DIR_NAME and TAR.
[#:tests?]: New argument.
[#:phases]: Replace ‘install’ with a simple copy operation and drop
post-install.
 2021-07-30 15:22:16 +02:00
Leo Prikler 0a1df50e9f
gnu: Fix OpenSFX build. 
OpenSFX 1.0.1 uses a different build system from the old one, which causes
weird errors.

* gnu/packages/games.scm (openttd-opensfx)[native-inputs]: Add tar.
[#:make-flags]: Drop INSTALL_DIR.  Add DIR_NAME and TAR.
[#:tests?]: New argument.
[#:phases]: Add ‘prebuild’.  Replace ‘install’ with a simple copy.
 2021-07-30 15:22:16 +02:00
Eric Bavier 9b41c08f41
gnu: Add C-Vise. 
* gnu/packages/debug.scm (c-vise): New variable.
 2021-07-30 08:13:44 -05:00
Eric Bavier f71b91a22b
gnu: Add python-pebble. 
* gnu/packages/python-xyz.scm (python-pebble): New variable.
 2021-07-30 08:13:38 -05:00
Leo Prikler 1484de9eff
gnu: Fix OpenSFX URI. 
In commit 1cdf1cd7fe, the URI was updated to the
wrong value and the hash not updated at all, so people would erroneously fetch
the old package from a wrong description.

* gnu/packages/games.scm (openttd-opensfx)[uri]: Use
<https://cdn.openttd.org/opensfx-releases>.
[sha256]: Update accordingly.
 2021-07-30 14:29:21 +02:00
Leo Prikler e638a9a1f7
gnu: openttd-opengfx: Update to 0.6.1. 
* gnu/packages/games.scm (openttd-opengfx): Update to 0.6.1.
 2021-07-30 10:01:31 +02:00
Ron Nazarov 65e1d39f9f
licenses: Remove CC-Sampling+-1.0. 
* guix/licenses.scm (cc-sampling-plus-1.0): Remove variable.
 2021-07-30 10:01:31 +02:00
Ron Nazarov 1cdf1cd7fe
gnu: openttd-opensfx: Update to 1.0.1. 
* gnu/packages/games.scm (openttd-opensfx): Update to 1.0.1.
[source]: Use <https://cdn.openttd.org>.
[license]: Update to CC BY-SA 3.0.
 2021-07-30 10:00:42 +02:00
Nicolas Goaziou 9f48f71398
gnu: emacs-string-inflection: Update to 1.0.14. 
* gnu/packages/emacs-xyz.scm (emacs-string-inflection): Update to 1.0.14.
 2021-07-30 08:34:29 +02:00
Maxim Cournoyer daeef2e7f4
gnu: Add createrepo-c. 
* gnu/packages/rpm.scm (createrepo-c): New variable.
 2021-07-29 22:03:34 -04:00
Maxim Cournoyer 0413e90ab1
gnu: Add libmodulemd. 
* gnu/packages/rpm.scm (libmodulemd): New variable.
 2021-07-29 22:03:34 -04:00
Maxim Cournoyer 4613a9948a
gnu: Add drpm. 
* gnu/packages/rpm.scm: Add file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register it.
 2021-07-29 22:03:34 -04:00
Maxim Cournoyer e81228166e
gnu: web: Move libyaml and libcyaml to (gnu packages serialization). 
Files to be adjusted were searched with the following command:

 $ git ls-files | xargs grep -l -E ',libc?yaml' | \
       xargs grep -L '(gnu packages serialization)'

* gnu/packages/web.scm (libyaml, libyaml+static, libcyaml): Move to...
* gnu/packages/serialization.scm: ... here.
 2021-07-29 22:03:33 -04:00
Maxim Cournoyer 84fa28234f
gnu: Add zchunk. 
* gnu/packages/compression.scm (zchunk): New variable.
 2021-07-29 22:03:33 -04:00
Jack Hill 00c55e856f
gnu: Add nginx-rtmp-module. 
* gnu/packages/web.scm (nginx-rtmp-module): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-07-29 21:54:55 +02:00
Ludovic Courtès b402a3ec86
gnu: Add XNNPACK. 
* gnu/packages/machine-learning.scm (xnnpack): New variable.
* gnu/packages/patches/xnnpack-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2021-07-29 21:54:55 +02:00
Ludovic Courtès 1daa662722
gnu: Add FP16. 
* gnu/packages/patches/fp16-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (fp16): New variable.
 2021-07-29 21:54:55 +02:00
Ludovic Courtès 065d45e8a1
gnu: Add Psimd. 
* gnu/packages/parallel.scm (psimd): New variable.
 2021-07-29 21:54:55 +02:00
Ludovic Courtès 4c5ad82780
gnu: Add cpuinfo. 
* gnu/packages/parallel.scm (cpuinfo): New variable.
* gnu/packages/patches/cpuinfo-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2021-07-29 21:54:55 +02:00
Ludovic Courtès 646b5ad983
gnu: Add googlebenchmark. 
* gnu/packages/check.scm (googlebenchmark): New variable.
 2021-07-29 21:54:54 +02:00
Ludovic Courtès 18d04fef0f
gnu: Add pthreadpool. 
* gnu/packages/parallel.scm (pthreadpool): New variable.
* gnu/packages/patches/pthreadpool-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2021-07-29 21:54:54 +02:00
Ludovic Courtès a9bc8a25eb
gnu: Add FXDiv. 
* gnu/packages/maths.scm (fxdiv): New variable.
* gnu/packages/patches/fxdiv-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2021-07-29 21:54:54 +02:00
Ricardo Wurmus ffb381856d
gnu: r-xcms: Update to 3.14.1. 
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.14.1.
 2021-07-29 20:20:18 +02:00
Ricardo Wurmus e06beb503c
gnu: r-reportingtools: Update to 2.32.1. 
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.32.1.
 2021-07-29 20:20:15 +02:00
Tobias Geerinckx-Rice c022c1e5b2
gnu: php: Update to 7.4.22 [security fixes]. 
* gnu/packages/php.scm (php): Update to 7.4.22.
 2021-07-29 19:57:57 +02:00
Christopher Lemmer Webber 45235e67e4
system: Add (gnu system setuid). 
I flubbed and somehow when including the patch series, this got dropped.
Oops... should fix things again.

* gnu/system/setuid.scm: New file.
 2021-07-29 13:09:48 -04:00
Brice Waegeneire a85ec0bf69
services: Migrate to <setuid-program>. 
* gnu/services/dbus.scm (dbus-setuid-programs, polkit-setuid-programs):
  Return setuid-programs.
* gnu/services/desktop.scm (enlightenment-setuid-programs): Return
 setuid-programs.
 (%desktop-services)[mount-setuid-helpers]: Use setuid-programs.
* gnu/services/docker.scm (singularity-setuid-programs): Return
 setuid-programs.
* gnu/services/xorg.scm(screen-locker-setuid-programs): Return
 setuid-programs.
* gnu/system.scm (%setuid-programs): Return setuid-programs.
* doc/guix.texi (Setuid Programs, operating-system Reference): Replace
  'list of G-expressions' with 'list of <setuid-program>'.
 2021-07-29 11:32:48 -04:00
Chris Lemmer-Webber a7ac19851b
services: setuid: More configurable setuid support. 
New record <setuid-program> with fields for setting the specific user
and group, as well as specifically selecting the setuid and setgid bits,
for a program within the setuid-program-service.

* gnu/services.scm (setuid-program-file-like-deprecated): New function.
  (setuid-program-service-type): Make use of
  setuid-program->activation-gexp.  Adjust the extend property to handle
  <setuid-program>.
* gnu/build/activation.scm (activate-setuid-programs): Update to expect a
  <setuid-record> list for each program entry.
* gnu/system.scm: (operating-system-setuid-programs): Renamed to
  %operating-system-setuid-programs and replace it with new procedure.
  (operating-system-default-essential-services,
  hurd-default-essential-services): Replace
  operating-system-setuid-programs with
  %operating-system-setuid-programs.
* gnu/system/setuid.scm: New file.
* doc/guix.texi (Setuid Programs): Document <setuid-program>.

Co-authored-by: Brice Waegeneire <brice@waegenei.re>
 2021-07-29 11:32:08 -04:00
Ricardo Wurmus 5a1ce6cf70
gnu: r-matrixstats: Update to 0.60.0. 
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.60.0.
 2021-07-29 17:11:09 +02:00
Ricardo Wurmus 2c625a4969
gnu: r-e1071: Update to 1.7-8. 
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-8.
 2021-07-29 17:11:09 +02:00
Ricardo Wurmus 234549dbfe
gnu: r-protolite: Update to 2.1.1. 
* gnu/packages/cran.scm (r-protolite): Update to 2.1.1.
 2021-07-29 17:11:09 +02:00
Ricardo Wurmus d9a5c8b7e3
gnu: r-lwgeom: Update to 0.2-7. 
* gnu/packages/cran.scm (r-lwgeom): Update to 0.2-7.
 2021-07-29 17:11:09 +02:00
Ricardo Wurmus 03260ba1a4
gnu: r-mgsub: Update to 1.7.3. 
* gnu/packages/cran.scm (r-mgsub): Update to 1.7.3.
 2021-07-29 17:11:09 +02:00
Ricardo Wurmus 1d2b6230da
gnu: r-matrixcalc: Update to 1.0-5. 
* gnu/packages/cran.scm (r-matrixcalc): Update to 1.0-5.
 2021-07-29 17:11:09 +02:00
Ricardo Wurmus a648eaa915
gnu: r-leiden: Update to 0.3.9. 
* gnu/packages/cran.scm (r-leiden): Update to 0.3.9.
 2021-07-29 17:11:09 +02:00
Ricardo Wurmus 4b322909d4
gnu: r-dalex: Update to 2.3.0. 
* gnu/packages/cran.scm (r-dalex): Update to 2.3.0.
 2021-07-29 17:11:09 +02:00
Ricardo Wurmus 75318afcdf
gnu: r-sf: Update to 1.0-2. 
* gnu/packages/cran.scm (r-sf): Update to 1.0-2.
 2021-07-29 17:11:09 +02:00
Ricardo Wurmus d30f6cd6cc
gnu: r-summarytools: Update to 1.0.0. 
* gnu/packages/cran.scm (r-summarytools): Update to 1.0.0.
 2021-07-29 17:11:08 +02:00
Ricardo Wurmus 1cc30d1eb6
gnu: r-ggeffects: Update to 1.1.1. 
* gnu/packages/cran.scm (r-ggeffects): Update to 1.1.1.
 2021-07-29 17:11:08 +02:00
Ricardo Wurmus 07726b8575
gnu: r-pillar: Update to 1.6.2. 
* gnu/packages/cran.scm (r-pillar): Update to 1.6.2.
 2021-07-29 17:11:08 +02:00
Ricardo Wurmus 5eac5eb748
gnu: r-vioplot: Update to 0.3.7. 
* gnu/packages/cran.scm (r-vioplot): Update to 0.3.7.
 2021-07-29 17:11:08 +02:00