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133078 commits

Author SHA1 Message Date
Ricardo Wurmus f3ea06baca
gnu: r-snprelate: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-snprelate): Update to 1.36.1.

Change-Id: I5cf14d463c0f4ca3707a8ac33c7a06baa4337789
2024-03-06 11:31:32 +01:00
Ricardo Wurmus 82a449419c
gnu: r-s4arrays: Update to 1.2.1.
* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.2.1.

Change-Id: I68c0ee03264073e8816fc92fbaa97ebb6c5036ed
2024-03-06 11:31:32 +01:00
Ricardo Wurmus c202079ef8
gnu: r-ggcyto: Update to 1.30.2.
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.30.2.

Change-Id: I29c123aa60347b491412631f036923c3bbb7d6c9
2024-03-06 11:31:32 +01:00
Ricardo Wurmus f83fbb9353
gnu: r-ggtree: Update to 3.10.1.
* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.10.1.

Change-Id: I62eec59a6be3f806261198a1d39eb38ee86a9a79
2024-03-06 11:31:31 +01:00
Ricardo Wurmus 7ddc66bd36
gnu: r-nebulosa: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-nebulosa): Update to 1.12.1.
[propagated-inputs]: Remove r-seurat; add r-ggrastr and r-seuratobject.

Change-Id: If301102ec02ce618ed1ebeff17a9d7e0845e847c
2024-03-06 11:31:31 +01:00
Carlo Zancanaro 9d9bb8955a
scripts: import: elpa: Unquote-splice package sexp contents.
* guix/scripts/import/elpa.scm (guix-import-elpa): Unquote-splice the contents
of the package sexp so the matched package definition is returned unchanged.

Change-Id: Iaaa7e72390c73c6d6671811fe9ac284d599b44c6
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-06 11:09:55 +01:00
Ricardo Wurmus 86552708c3
gnu: r-datasaurus: Update to 0.1.8.
* gnu/packages/statistics.scm (r-datasaurus): Update to 0.1.8.

Change-Id: Ida2de5f36bbb7bbb42f6088bffafaa0059c02ec3
2024-03-06 09:42:06 +01:00
Ricardo Wurmus 85cdebc014
gnu: r-naniar: Update to 1.1.0.
* gnu/packages/statistics.scm (r-naniar): Update to 1.1.0.
[propagated-inputs]: Add r-lifecycle.

Change-Id: I01815422981039a0b4c23a2d91fae37300e9d5da
2024-03-06 09:42:06 +01:00
Ricardo Wurmus 5ec0ff2dc8
gnu: r-rcppeigen: Update to 0.3.4.0.0.
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.4.0.0.

Change-Id: Ie879a04dcc7c22fac69da0f72a82868f14571f59
2024-03-06 09:42:06 +01:00
Ricardo Wurmus 839a6ed474
gnu: r-vgam: Update to 1.1-10.
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-10.

Change-Id: I0f116e19095577e20ac9c6644e00141dcc953d84
2024-03-06 09:42:06 +01:00
Ricardo Wurmus 91be200249
gnu: r-rcpparmadillo: Update to 0.12.8.1.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.12.8.1.0.

Change-Id: Ic0e678dadd5fcbbea3b0edda60a6bc465bdbe98c
2024-03-06 09:42:06 +01:00
Ricardo Wurmus 3db9c83498
gnu: r-data-table: Update to 1.15.2.
* gnu/packages/statistics.scm (r-data-table): Update to 1.15.2.

Change-Id: I1e68949514e1f525bc70218752d3f978b787d4b6
2024-03-06 09:42:06 +01:00
Ricardo Wurmus 9519b412e7
gnu: r-locfit: Update to 1.5-9.9.
* gnu/packages/statistics.scm (r-locfit): Update to 1.5-9.9.

Change-Id: I792b37ef9b5f10b95b14ca633d254843a9de9aab
2024-03-06 09:42:06 +01:00
Ricardo Wurmus 17f602aec2
gnu: r-gdtools: Update to 0.3.7.
* gnu/packages/statistics.scm (r-gdtools): Update to 0.3.7.

Change-Id: I6f784e10a6856c3b651fca44f658810750a255fc
2024-03-06 09:42:06 +01:00
Ricardo Wurmus f0ea78f219
gnu: r-gganimate: Update to 1.0.9.
* gnu/packages/cran.scm (r-gganimate): Update to 1.0.9.
[propagated-inputs]: Add r-cli, r-lifecycle, r-transformr, and r-vctrs.

Change-Id: I6fbee3cf380992caeeedaa738aa21dabad670950
2024-03-06 09:42:06 +01:00
Ricardo Wurmus 1c13f01037
gnu: r-mlr3tuning: Update to 0.20.0.
* gnu/packages/cran.scm (r-mlr3tuning): Update to 0.20.0.

Change-Id: I4eff54cf5e5961ea8389e606fcdf8b197c9a0b43
2024-03-06 09:42:06 +01:00
Ricardo Wurmus 85c9d158f3
gnu: r-bbotk: Update to 0.8.0.
* gnu/packages/cran.scm (r-bbotk): Update to 0.8.0.

Change-Id: I5ecb9e126b96970db6aee5374ae809cd03eab9f4
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 74a179bc44
gnu: r-mlr3: Update to 0.18.0.
* gnu/packages/cran.scm (r-mlr3): Update to 0.18.0.

Change-Id: I4694be8897b834dc107b80aff89ccf2fb43759d1
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 03c6a20fc1
gnu: r-seurat: Update to 5.0.2.
* gnu/packages/cran.scm (r-seurat): Update to 5.0.2.

Change-Id: I358d4bcab984b207ab9ee69ebdaeecf440626b70
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 7b1bdd0ecc
gnu: r-spatstat-random: Update to 3.2-3.
* gnu/packages/cran.scm (r-spatstat-random): Update to 3.2-3.

Change-Id: Ie8496efc4fbb4ab7ed296353ac746c7f2fb6f5ab
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 8337e810fc
gnu: r-spatstat-geom: Update to 3.2-9.
* gnu/packages/cran.scm (r-spatstat-geom): Update to 3.2-9.

Change-Id: I122f0f3a5ca692eb32cfa7adfb050e11a91d0a84
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 6982f320e2
gnu: r-hrbrthemes: Update to 0.8.7.
* gnu/packages/cran.scm (r-hrbrthemes): Update to 0.8.7.
[propagated-inputs]: Remove r-htmltools, r-knitr, and r-rmarkdown.
[native-inputs]: Remove r-knitr.

Change-Id: Id7486f175962306caea0ef290925f809e6db7972
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 06a3e957cb
gnu: r-erm: Update to 1.0-5.
* gnu/packages/cran.scm (r-erm): Update to 1.0-5.

Change-Id: I2afb17f770e54a3fb33dd2decf97fa33946d65df
2024-03-06 09:42:05 +01:00
Ricardo Wurmus fc8e0c91e3
gnu: r-stanheaders: Update to 2.32.6.
* gnu/packages/cran.scm (r-stanheaders): Update to 2.32.6.

Change-Id: I257b98c4d366644412823e7db9c077c5fa94437c
2024-03-06 09:42:05 +01:00
Ricardo Wurmus ac139b1644
gnu: r-forecast: Update to 8.22.0.
* gnu/packages/cran.scm (r-forecast): Update to 8.22.0.

Change-Id: I866e6aa742a663fe8baa4ba5e90add41cfc9b957
2024-03-06 09:42:05 +01:00
Ricardo Wurmus d51eaad127
gnu: r-fda: Update to 6.1.7.
* gnu/packages/cran.scm (r-fda): Update to 6.1.7.

Change-Id: Ieee4094c64be5bb89b257efea788a3799baef7b7
2024-03-06 09:42:05 +01:00
Ricardo Wurmus e96228adb8
gnu: r-showtext: Update to 0.9-7.
* gnu/packages/cran.scm (r-showtext): Update to 0.9-7.

Change-Id: Iff35114553726dd2941e870de02427c73cb397f1
2024-03-06 09:42:05 +01:00
Ricardo Wurmus b8a4807f1a
gnu: r-sysfonts: Update to 0.8.9.
* gnu/packages/cran.scm (r-sysfonts): Update to 0.8.9.

Change-Id: I4b1398049ac0fd07dcbd56247e3808c85c1b3d7e
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 69acd366ee
gnu: r-leidenalg: Update to 1.1.3.
* gnu/packages/cran.scm (r-leidenalg): Update to 1.1.3.

Change-Id: I20737485f2bbeab212bb1cce2f5935f0df938741
2024-03-06 09:42:05 +01:00
Ricardo Wurmus e8121c0c2c
gnu: r-ggraph: Update to 2.2.0.
* gnu/packages/cran.scm (r-ggraph): Update to 2.2.0.
[propagated-inputs]: Remove r-digest, r-gtable, and r-rcpp; add r-cpp11 and r-memoise.

Change-Id: Id5c4be4765171c0b46bd421cf13e4dbdbfa44955
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 44e4a9a3f3
gnu: r-tweenr: Update to 2.0.3.
* gnu/packages/cran.scm (r-tweenr): Update to 2.0.3.

Change-Id: Ia7780ff00aeb25937a29a33cdb2d683f59067114
2024-03-06 09:42:05 +01:00
Ricardo Wurmus c8449027a0
gnu: r-bookdown: Update to 0.38.
* gnu/packages/cran.scm (r-bookdown): Update to 0.38.

Change-Id: I2dd69baf405e938626ad487691fec8ee97027b97
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 1054398a12
gnu: r-deldir: Update to 2.0-4.
* gnu/packages/cran.scm (r-deldir): Update to 2.0-4.

Change-Id: I31ef8c01111569c3619b80b1178413a5cd84d07c
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 9cfd5d3886
gnu: r-parallelly: Update to 1.37.1.
* gnu/packages/cran.scm (r-parallelly): Update to 1.37.1.

Change-Id: I6ff44227c6fcd9c49bf4eb4d172005334bb73d1f
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 8f0b8ad9fc
gnu: r-ontologyindex: Update to 2.12.
* gnu/packages/cran.scm (r-ontologyindex): Update to 2.12.

Change-Id: Iaa72aa3c1f01f4bdc82707aa8fbc70949647e78f
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 1fa13a5416
gnu: r-tractor-base: Update to 3.4.2.
* gnu/packages/cran.scm (r-tractor-base): Update to 3.4.2.

Change-Id: I86d07604a6f3bcac561d8df0e7332effdce92176
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 7cdc494901
gnu: r-colorramps: Update to 2.3.2.
* gnu/packages/cran.scm (r-colorramps): Update to 2.3.2.

Change-Id: I81f7e3141c97da2f9c8a6a6fee37de98c6a7d4c8
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 1e3ca80a83
gnu: r-partr2: Update to 0.9.2.
* gnu/packages/cran.scm (r-partr2): Update to 0.9.2.

Change-Id: Ib746e6755e2ea99ce08cdd3674b069cd14e6109d
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 073bf699aa
gnu: r-nodbi: Update to 0.10.3.
* gnu/packages/cran.scm (r-nodbi): Update to 0.10.3.

Change-Id: I6acc7fddf0c9bc2eb0bdc241d024431d9a0d9c4e
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 8ae33df24d
gnu: r-hdf5r: Update to 1.3.10.
* gnu/packages/cran.scm (r-hdf5r): Update to 1.3.10.
[native-inputs]: Add pkg-config.

Change-Id: Ie93236c090afef5d29178bd4b3a9152ae9298a54
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 4fd4d7a953
gnu: r-factominer: Update to 2.10.
* gnu/packages/cran.scm (r-factominer): Update to 2.10.

Change-Id: Id9f93c26d3ab7d94a2f19e9606c64d20540284e8
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 2668c97d55
gnu: r-ggsci: Update to 3.0.1.
* gnu/packages/cran.scm (r-ggsci): Update to 3.0.1.

Change-Id: I95c260015b909d2c6b8da4d853f2b1a528c4ef2e
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 72d66dfd07
gnu: r-renv: Update to 1.0.5.
* gnu/packages/cran.scm (r-renv): Update to 1.0.5.

Change-Id: Ie51126dec50f4ec3bacd0b52354fd1a4cc2a926f
2024-03-06 09:42:05 +01:00
Ricardo Wurmus ae752e8872
gnu: r-n2r: Update to 1.0.3.
* gnu/packages/cran.scm (r-n2r): Update to 1.0.3.

Change-Id: I4bd01c00d9a772b69fb69e23d94d8a98f7db6ff0
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 8a6ad77b73
gnu: r-lava: Update to 1.8.0.
* gnu/packages/cran.scm (r-lava): Update to 1.8.0.
[propagated-inputs]: Add r-cli.

Change-Id: I3cac62611057dd66efa82ef2c8f6ae460fd91ff7
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 37dd00abd7
gnu: r-bdsmatrix: Update to 1.3-7.
* gnu/packages/cran.scm (r-bdsmatrix): Update to 1.3-7.

Change-Id: I7244cad6a9e82a0d87d5d1abcd427850994b63c0
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 24d2c8af30
gnu: r-rmumps: Update to 5.2.1-28.
* gnu/packages/cran.scm (r-rmumps): Update to 5.2.1-28.

Change-Id: Ifd5efb6d21dcf3c90da416dd89a2711a328dbce9
2024-03-06 09:42:05 +01:00
Ricardo Wurmus 62a0cd5e4b
gnu: r-spelling: Update to 2.3.0.
* gnu/packages/cran.scm (r-spelling): Update to 2.3.0.

Change-Id: I08bc6914707efa49418d1473cca9b239afc39dbe
2024-03-06 09:42:04 +01:00
Ricardo Wurmus e9edbab0db
gnu: r-curl: Update to 5.2.1.
* gnu/packages/cran.scm (r-curl): Update to 5.2.1.

Change-Id: I3d2906ffaf2f17f70be10267017e31dec953ef76
2024-03-06 09:42:04 +01:00
Ricardo Wurmus fd5b1b5514
gnu: r-secretbase: Update to 0.3.0.1.
* gnu/packages/cran.scm (r-secretbase): Update to 0.3.0.1.

Change-Id: Id9ce065d84105f1e0e45d3c8938cdc3e9b2a98d3
2024-03-06 09:42:04 +01:00