Commit graph

74731 commits

Author SHA1 Message Date
Ricardo Wurmus f21c711a0f
gnu: kallisto: Update to 0.46.2.
* gnu/packages/bioinformatics.scm (kallisto): Update to 0.46.2.
[source]: Remove bundled htslib sources.
2021-03-02 17:06:58 +01:00
Ricardo Wurmus cc39e9dbdc
gnu: kallisto: Use older htslib.
* gnu/packages/bioinformatics.scm (kallisto)[inputs]: Use htslib-1.9 instead
of the latest.
2021-03-02 17:06:58 +01:00
Tobias Geerinckx-Rice 467f7919e2
gnu: liburcu: Update to 0.12.2.
* gnu/packages/datastructures.scm (liburcu): Update to 0.12.2.
2021-03-02 16:37:37 +01:00
Xinglu Chen 05dc279bbe
gnu: xwallpaper: Update to 0.6.6.
* gnu/packages/xdisorg.scm (xwallpaper): Update to 0.6.6.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2021-03-02 16:37:37 +01:00
Xinglu Chen 7bcbf35efa
gnu: feh: Update to 3.6.3.
* gnu/packages/image-viewers.scm (feh): Update to 3.6.3.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2021-03-02 16:37:36 +01:00
Simon South 673ab1cdb4
gnu: knot-resolver: Update to 5.3.0.
* gnu/packages/dns.scm (knot-resolver): Update to 5.3.0.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2021-03-02 16:05:29 +01:00
Nicolas Goaziou 2892e1a2a8
gnu: bzflag: Update to 2.4.22.
* gnu/packages/games.scm (bzflag): Update to 2.4.22.
2021-03-02 14:09:32 +01:00
Nicolas Goaziou 1a004fc29b
gnu: emacs-posframe: Update to 0.8.6.
* gnu/packages/emacs-xyz.scm (emacs-posframe): Update to 0.8.6.
2021-03-02 14:06:40 +01:00
Nicolas Goaziou fee4afd84b
gnu: Add gimagereader.
* gnu/packages/ocr.scm (gimagereader): New variable.
2021-03-02 14:02:58 +01:00
Pierre Neidhardt f72caafc6b
gnu: sbcl-hu.dwim.stefil: Update to 20180609.
* gnu/packages/lisp-xyz.scm (sbcl-hu.dwim.stefil): Update to 20180609.
2021-03-02 13:38:37 +01:00
Pierre Neidhardt 8664eede1a
gnu: sbcl-hu.dwim.common-lisp: Update to 2021-01-27.
* gnu/packages/lisp-xyz.scm (sbcl-hu.dwim.common-lisp): Update to 2021-01-27.
[source]: Use new GitHub repository.
[home-page]: Use full address.
2021-03-02 13:38:37 +01:00
Pierre Neidhardt 4a9cb7a46f
gnu: sbcl-hu.dwim.asdf: Update to 20200724.
* gnu/packages/lisp-xyz.scm (sbcl-hu.dwim.asdf): Update to 20200724.
[source]: Use new GitHub repository.
2021-03-02 13:38:37 +01:00
qblade ac11ef2f50
gnu: Add bmake.
* gnu/packages/build-tools.scm (bmake): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-03-02 11:56:55 +01:00
Florian Pelz d6547b1e40
news: Add ‘de’ translation. 2021-03-02 09:58:13 +00:00
Pierre Neidhardt b35dea1d52
gnu: Add ecl-file-attributes, cl-file-attributes.
* gnu/packages/lisp-xyz.scm (cl-file-attributes, ecl-file-attributes): New variables.
There were mistakenly left out from the previous commit.
2021-03-02 10:12:06 +01:00
Pierre Neidhardt 14b32f62ac
gnu: Add file-attributes.
* gnu/packages/lisp-xyz.scm (cl-file-attributes, ecl-file-attributes,
sbcl-file-attributes): New variables.
2021-03-02 10:09:07 +01:00
Nicolas Goaziou c7e4a6dbb4
gnu: emacs-consult: Update to 0.6.
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.6.
2021-03-02 10:03:35 +01:00
Efraim Flashner af931e654a
gnu: parallel: Update to 20210222.
* gnu/packages/parallel.scm (parallel): Update to 20210222.
2021-03-02 10:46:57 +02:00
Efraim Flashner 0f8a646e03
gnu: octave: Update to 6.2.0.
* gnu/packages/maths.scm (octave): Update to 6.2.0.
[source]: Download tar.xz tarball.
[native-inputs]: Remove lzip.
2021-03-02 10:46:56 +02:00
Efraim Flashner 70487e3ee9
gnu: font-gnu-unifont: Update to 13.0.06.
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 13.0.06.
2021-03-02 10:46:56 +02:00
Efraim Flashner cd7bd1cc8f
gnu: libredwg: Update to 0.12.3.
* gnu/packages/engineering.scm (libredwg): Update to 0.12.3.
2021-03-02 10:46:56 +02:00
Michael Rohleder 94dddc8b80
gnu: go-ipfs: Update to 0.8.0.
* gnu/packages/ipfs.scm (go-ipfs): Update to 0.8.0.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-03-02 09:44:34 +01:00
Michael Rohleder c19544bc48
gnu: chessx: Update to 1.5.6.
* gnu/packages/games.scm (chessx): Update to 1.5.6.
[arguments]: Remove now unneeded build fix.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-03-02 09:41:46 +01:00
Michael Rohleder 29bcfcd813
gnu: xfce4-panel: Update to 4.16.2.
* gnu/packages/xfce.scm (xfce4-panel): Update to 4.16.2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-03-02 09:39:12 +01:00
Michael Rohleder 9d03eb8095
gnu: xfce4-time-out-plugin: Update to 1.1.2.
* gnu/packages/xfce.scm (xfce4-time-out-plugin): Update to 1.1.2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-03-02 09:38:38 +01:00
Michael Rohleder 1196f3f95a
gnu: mousepad: Update to 0.5.3.
* gnu/packages/xfce.scm (mousepad): Update to 0.5.3.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-03-02 09:37:53 +01:00
Michael Rohleder 412892a280
gnu: xfce4-cpugraph-plugin: Update to 1.2.3.
* gnu/packages/xfce.scm (xfce4-cpugraph-plugin): Update to 1.2.3.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-03-02 09:36:13 +01:00
Nicolas Goaziou 3fdb8fc0c4
gnu: python-pikepdf: Update to 2.8.0.
* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.8.0.
2021-03-02 09:35:13 +01:00
Nicolas Goaziou 683cccc3e7
gnu: emacs-dash: Update to 2.18.1.
* gnu/packages/emacs-xyz.scm (emacs-dash): Update to 2.18.1.
2021-03-02 09:33:58 +01:00
Z572 0eb64c2c85
gnu: dwl: Update to 0.2.
* gnu/packages/wm.scm (dwl): Update to 0.2.
[arguments]: Remove the install phase.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-03-02 09:31:52 +01:00
Léo Le Bouter 4bc9a1f4e3
gnu: java-tomcat: Update to 8.5.63 [security fixes].
* gnu/packages/web.scm (java-tomcat): Update to 8.5.63.
2021-03-02 02:17:35 +01:00
Björn Höfling d5ac66a2ee
gnu: i3-wm: Use asciidoc-py3.
* gnu/packages/wm.scm (i3-wm)[inputs]: Remove asciidoc.
[native-inputs]: Add asciidoc-py3.
2021-03-01 23:01:48 +01:00
Björn Höfling baec2a0846
gnu: glslang: Use 11.0.0 as git-fetch tag.
* gnu/packages/vulkan.scm (glslang)[source]: Use tag 11.0.0.

From the README.md: "The versioning scheme is being improved, and you might
notice some differences. This is currently WIP, but will be coming soon."

In this curse, they moved the tag 10-11.0.0 to just 11.0.0.

See also <https://github.com/KhronosGroup/glslang/issues/2450>.
2021-03-01 23:01:48 +01:00
Mădălin Ionel Patrașcu 35814292b6
import/cran: Fix detection of Fortran files.
This fixes a bug whereby the Guix importer considers files like .f.* to be
Fortran files.

The expression "\\.f(90|95)?" would match a lot of files containing ".f"
although they are not Fortran files.  Instead we should only consider files
with this *suffix*.

* guix/import/cran.scm (directory-needs-fortran?): Only check for suffixes.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2021-03-01 22:40:41 +01:00
Leo Famulari 747f68bfb2
gnu: Audacity: Build with Python 3.
* gnu/packages/audio.scm (audacity)[native-inputs]: Replace python-2 with
python.
2021-03-01 15:35:25 -05:00
Léo Le Bouter e56186df59
gnu: cutter: Fix build by depending on older radare2.
* gnu/packages/engineering.scm (radare2-for-cutter): New variable. Version 5.0.0.
(cutter)[inputs]: Move from radare2 to radare2-for-cutter.
2021-03-01 19:06:42 +01:00
pukkamustard ff9f2463f9
gnu: Add guile-cbor.
* gnu/packages/guile-xyz.scm (guile-cbor): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-03-01 17:45:51 +01:00
Xinglu Chen af978312e5
import: hackage: Accept optional version parameter.
* guix/import/hackage.scm (hackage-recursive-import): Add the VERSION key.
  Make REPO a key.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-03-01 17:45:51 +01:00
Ludovic Courtès f293705d7e
serialization: Micro-optimize string literal output in 'write-file-tree'.
This reduces allocations and bit twiddling in the loop.

* guix/serialization.scm (write-literal-strings): New macro.
(write-file-tree): Use it in lieu of 'write-string' calls where applicable.
2021-03-01 17:45:51 +01:00
Ludovic Courtès 9ce78f27a0
environment: Allow compilation with Guile 2.2.
Fixes <https://bugs.gnu.org/46826>.
Reported by cage <cage-dev@twistfold.it>.

* guix/scripts/environment.scm (guix-environment): Move 'manifest'
definition before expression.
2021-03-01 17:45:50 +01:00
Efraim Flashner 7ca43b0a1e
gnu: gama: Delete bundled pdfs.
* gnu/packages/gps.scm (gama)[source]: Adjust snippet to also remove
generated PDFs.
2021-03-01 11:44:31 +02:00
Efraim Flashner ac17ff0669
gnu: gama: Update to 2.14.
* gnu/packages/gps.scm (gama): Update to 2.14.
2021-03-01 11:43:06 +02:00
Léo Le Bouter 85da3f52cb
gnu: radare2: Update to 5.1.1.
* gnu/packages/engineering.scm (radare2): Update to 5.1.1.
2021-03-01 06:10:57 +01:00
Léo Le Bouter d0a0215cda
gnu: node: Update to 10.24.0 [security fixes].
* gnu/packages/node.scm (node): Update to 10.24.0.
2021-03-01 06:02:28 +01:00
Léo Le Bouter 9be83f28c0
gnu: ansible: Update to 2.9.18 [security fixes].
* gnu/packages/admin.scm (ansible): Update to 2.9.18.
2021-03-01 05:51:28 +01:00
Léo Le Bouter ea13b3a14c
gnu: mumble: Update to 1.3.4 [security fixes].
* gnu/packages/telephony.scm (mumble): Update to 1.3.4.
[source]: Use GitHub releases as tarballs stopped being distributed through
'mumble.info'.
2021-03-01 05:45:00 +01:00
Léo Le Bouter d85edd7a95
gnu: stunnel: Update to 5.58 [security fixes].
* gnu/packages/web.scm (stunnel): Update to 5.58.
2021-03-01 05:30:55 +01:00
Léo Le Bouter 0f4030c4c6
gnu: python-pysaml2: Update to 6.5.1 [fixes CVE-2021-21238, CVE-2021-21239].
* gnu/packages/python-xyz.scm (python-pysaml2): Update to 6.5.1.
2021-03-01 05:14:12 +01:00
Léo Le Bouter 143472afa4
gnu: quiterss: Fix lint warnings.
* gnu/packages/syndication.scm (quiterss):
[source]: Use git-fetch instead of autogenerated GitHub tarball. Remove
trailing whitespace.
2021-03-01 04:46:09 +01:00
Léo Le Bouter 8e5061e6d6
gnu: Add quiterss.
* gnu/packages/syndication.scm (quiterss): New variable.
2021-03-01 04:34:31 +01:00