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Author SHA1 Message Date
Leo Famulari ef221c8b71
gnu: PostgreSQL: Update to 13.3 [fixes CVE-2021-{32027,32028,32029}]. 
* gnu/packages/databases.scm (postgresql-13)[replacement]: Use postgresql-13.3.
(postgresql-13.2): Replace with ...
(postgresql-13.3): ... new variable.
 2021-05-17 15:05:14 -04:00
Fredrik Salomonsson 946dd6103a
gnu: emacs-libyaml: Adjust to changes in emacs-build-system. 
* gnu/packages/emacs-xyz.scm (emacs-libyaml)[#:phases]: Move
‘substitute-libyaml-core-path’ after ‘unpack’.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
 2021-05-17 19:57:32 +02:00
Ricardo Wurmus 48b8a5e701
gnu: pigx-chipseq: Update to 0.0.52. 
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.52.
 2021-05-17 18:45:55 +02:00
Sharlatan Hellseher 0d85c83602
gnu: Add cl-typesetting. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-typesetting, ecl-cl-typesetting,
  cl-typesetting): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-05-17 10:43:15 +02:00
Guillaume Le Vaillant 9983dee6b0
gnu: ecl-xmls: Disable tests. 
Upstream doesn't have a test suite adapted for ECL.

* gnu/packages/lisp-xyz.scm (ecl-xmls)[arguments]: Disable tests.
 2021-05-17 10:43:15 +02:00
Sharlatan Hellseher 199ae378c2
gnu: cl-pdf: Update to 2.0.0-1.dbafd62. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-pdf): Update to 2.0.0-1.dbafd62.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-05-17 10:15:54 +02:00
Leo Prikler 13b1319092
gnu: tsukundere: Update to 0.3.0. 
* gnu/packages/game-development.scm (tsukundere): Update to 0.3.0.
[patch-command]: Patch path to guile.  Construct load paths directly from
inputs.
[propagated-inputs]: Remove.
[inputs]: Add guile and guile-sdl2.
 2021-05-17 00:24:02 +02:00
Ludovic Courtès 938ffcbb05
publish: Add '--negative-ttl'. 
* guix/scripts/publish.scm (show-help, %options): Add '--negative-ttl'.
(render-narinfo, render-narinfo/cached, make-request-handler): Add #:negative-ttl
and honor it.
(run-publish-server): Add #:narinfo-negative-ttl and honor it.
(guix-publish): Honor '--negative-ttl'.
* tests/publish.scm ("negative TTL", "no negative TTL"): New tests.
 2021-05-16 23:28:11 +02:00
Ludovic Courtès dc3504913d
substitutes: Reduce negative TTLs. 
* guix/substitutes.scm (%narinfo-negative-ttl): Change to 15mn.
(%narinfo-transient-error-ttl): Halve.
 2021-05-16 23:28:11 +02:00
Xinglu Chen ae0882bbd6
gnu: mercurial: Patch to make it read HGEXTENSIONPATH. 
This will make Mercurial be able to find third-party extensions installed with
Guix, without having to set PYTHONPATH.

* gnu/packages/patches/mercurial-hg-extension-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register the patch.
* gnu/packages/version-control.scm (mercurial)[origin](patches): Apply the
patch.
[native-search-paths]: Add HGEXTENSIONPATH.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-16 23:28:11 +02:00
Xinglu Chen 541f93ada0
gnu: Add hg-commitsigs. 
* gnu/packages/version-control.scm (hg-commitsigs): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-05-16 23:28:11 +02:00
Xinglu Chen 3c5849f3ec
gnu: emacs-orderless: Update to 0.6. 
* gnu/packages/emacs-xyz.scm (emacs-orderless): Update to 0.6.
[native-inputs]: Add texinfo.
[arguments]<#:phases>: Install manual.
 2021-05-16 21:31:48 +02:00
Efraim Flashner 860ca285b6
gnu: Add julia-msgpack. 
* gnu/packages/julia-xyz.scm (julia-msgpack): New variable.
 2021-05-16 16:46:46 +03:00
Efraim Flashner ef9a552182
gnu: Add julia-suppressor. 
* gnu/packages/julia-xyz.scm (julia-suppressor): New variable.
 2021-05-16 16:44:14 +03:00
Efraim Flashner 9e77eb5884
gnu: Add julia-docstringextensions. 
* gnu/packages/julia-xyz.scm (julia-docstringextensions): New variable.
 2021-05-16 16:40:11 +03:00
Efraim Flashner fcc93efc56
gnu: Add julia-iocapture. 
* gnu/packages/julia-xyz.scm (julia-iocapture): New variable.
 2021-05-16 16:35:50 +03:00
Efraim Flashner ddcc5d4375
gnu: Add julia-zipfile. 
* gnu/packages/julia-xyz.scm (julia-zipfile): New variable.
 2021-05-16 16:24:45 +03:00
Efraim Flashner 69b13cd4ea
gnu: Add julia-zlib-jll. 
* gnu/packages/julia-xyz.scm (julia-zlib-jll): New variable.
 2021-05-16 16:23:06 +03:00
Leo Famulari 7c4c781aa4
gnu: Graphviz: Fix CVE-2020-18032. 
* gnu/packages/patches/graphviz-CVE-2020-18032.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/graphviz.scm (graphviz)[replacement]: New field.
(graphviz/fixed): New variable.
 2021-05-15 17:04:01 -04:00
Christopher Baines fd2abc2a51
gnu: emacs-wucuo: Fix arguments. 
I'm looking at this because the profile-collisions linter crashes for this
package, and that currently breaks processing revisions in the Guix Data
Service.

* gnu/packages/emacs-xyz.scm (emacs-wucuo)[arguments]: Change #tn to #t.
 2021-05-15 21:52:00 +01:00
Sergei Trofimovich 3a838e70c5
gnu: re2c: Update to 2.1.1. 
* gnu/packages/re2c.scm (re2c): Update to 2.1.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-05-15 23:17:33 +03:00
Michael Rohleder a77b2b43aa
gnu: mousepad: Update to 0.5.5. 
* gnu/packages/xfce.scm (mousepad): Update to 0.5.5.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-05-15 23:04:43 +03:00
Sharlatan Hellseher f5855555db
gnu: sniffio: Update to 1.2.0 
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-05-15 22:55:20 +03:00
Frank Pursel 2eaadc28e1
gnu: sonivox-eas: Update to 1.3.0. 
* gnu/packages/music.scm (sonivox-eas): Update to 1.3.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-05-15 22:45:08 +03:00
Efraim Flashner f7e5ecf71f
gnu: gcc-8: Update to 8.5.0. 
* gnu/packages/gcc.scm (gcc-8): Update to 8.5.0.
 2021-05-15 22:43:15 +03:00
Alexandre Hannud Abdo 5b359e4ba5
gnu: Add python-graph-tool. 
* gnu/packages/graph.scm (python-graph-tool): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2021-05-15 19:18:46 +02:00
Marius Bakke c5c977b5ea
gnu: libcdr: Update to 0.1.7. 
* gnu/packages/libreoffice.scm (libcdr): Update to 0.1.7.
 2021-05-15 19:18:46 +02:00
Marius Bakke d6915cb8ae
gnu: arpack-ng@3.3: Don't use unstable source tarball. 
* gnu/packages/maths.scm (arpack-ng-3.3.0)[name, home-page]: Remove.
[source]: Switch to GIT-FETCH.  Inline uses of NAME and HOME-PAGE.
 2021-05-15 19:18:46 +02:00
Marius Bakke 6b496f7b32
gnu: arpack-ng: Update to 3.8.0. 
* gnu/packages/maths.scm (arpack-ng): Update to 3.8.0.
[native-inputs]: Add PKG-CONFIG.
[inputs]: Add EIGEN.
 2021-05-15 19:18:46 +02:00
Marius Bakke d4f02447ff
gnu: pybind11: Update to 2.6.2. 
* gnu/packages/python-xyz.scm (pybind11): Update to 2.6.2.
 2021-05-15 19:18:46 +02:00
Tobias Geerinckx-Rice df48a11e1b
gnu: wl-clipboard: Don't require helper tools in $PATH. 
* gnu/packages/xdisorg.scm (wl-clipboard)[arguments]: Add a new
'patch-file-names phase.
[inputs]: Add coreutils and xdg-utils.

Reported by pineapples in #guix.
 2021-05-15 18:52:55 +02:00
Tissevert 992aa56e7c
gnu: Add vim-solarized. 
* gnu/packages/vim.scm (vim-solarized): New public variable.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2021-05-15 14:55:34 +02:00
Maxim Cournoyer 38d337a5b7
tests: Conditionally include tests/go.scm. 
The Go importer module requires a recent guile-glib; the test should only be
run when such requirement is met.

* Makefile.am (SCM_TESTS)[HAVE_GUILE_LIB]: Add tests/go.scm only if this
condition is met.

Reported-by: Chris Marusich <cmmarusich@gmail.com>
 2021-05-15 08:40:00 -04:00
Sharlatan Hellseher ce9c5fd6ba
gnu: sbcl-static-dispatch: Update to 0.5.1. 
* gnu/packages/lisp-xyz.scm (sbcl-static-dispatch): Update to 0.5.1.
  [inputs]: Replace trivia by optima.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-05-15 13:58:12 +02:00
Nicolas Goaziou 62f204e1e6
gnu: emacs-vertico: Update to 0.9. 
* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.9.
 2021-05-15 13:28:47 +02:00
Nicolas Goaziou 9ed83885ae
gnu: emacs-corfu: Update to 0.7. 
* gnu/packages/emacs-xyz.scm (emacs-corfu): Update to 0.7.
 2021-05-15 13:27:44 +02:00
Christopher Baines 97d615b176
inferior: Support querying package replacements. 
I'm looking at this to help with adding support for looking up package
replacements to store in the Guix Data Service.

* guix/inferior.scm (inferior-package-replacement): New procedure.
* tests/inferior.scm ("inferior-package-replacement"): New test.
 2021-05-15 12:14:47 +01:00
Guillaume Le Vaillant b149c16371
gnu: monero-gui: Update to 0.17.2.2. 
* gnu/packages/finance.scm (monero-gui): Update to 0.17.2.2.
  [arguments]: Update 'fix-build' phase.
 2021-05-15 12:04:31 +02:00
Guillaume Le Vaillant bb6ae50d82
gnu: bitcoin-unlimited: Update to 1.9.2.0. 
* gnu/packages/finance.scm (bitcoin-unlimited): Update to 1.9.2.0.
 2021-05-15 10:50:45 +02:00
Guillaume Le Vaillant fbb099a448
gnu: sbcl-mito: Update to 0.1-2.2fbfc8a. 
* gnu/packages/lisp-xyz.scm (sbcl-mito): Update to 0.1-2.2fbfc8a.
  [inputs]: Remove optima. Add cl-package-locks and trivia.
 2021-05-15 10:21:39 +02:00
Guillaume Le Vaillant 404f37030e
gnu: sbcl-dbi: Update to 0.9.5-1.7ba050d. 
* gnu/packages/lisp-xyz.scm (sbcl-dbi): Update to 0.9.5-1.7ba050d.
  [native-inputs]: Add alexandria.
 2021-05-15 10:21:39 +02:00
Sharlatan Hellseher b0872fb29b
gnu: sbcl-sxql: Update to 0.1.0-2.acdd183. 
* gnu/packages/lisp-xyz.scm (sbcl-sxql): Update to 0.1.0-2.acdd183.
  [arguments]: Remove unnecessary '#:test-asd-file'.
  [inputs]: Add cl-package-locks.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-05-15 10:21:39 +02:00
Sharlatan Hellseher 7f96fb3f45
gnu: Add cl-package-locks. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-package-locks,
  ecl-cl-package-locks, cl-package-locks): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-05-15 10:21:39 +02:00
Leo Prikler 9e4b541961
gnu: komikku: Update to 0.28.1. 
* gnu/packages/gnome.scm (komikku): Update to 0.28.1.
 2021-05-15 10:14:49 +02:00
Leo Prikler c8c336f92c
gnu: guile-chickadee: Update to 0.7.0. 
* gnu/packages/game-development.scm (guile-chickadee): Update to 0.7.0.
 2021-05-15 10:14:48 +02:00
Leo Prikler 01359a3f18
gnu: guile-sdl2: Update to 0.6.0. 
* gnu/packages/sdl.scm (guile-sdl2): Update to 0.6.0.
 2021-05-15 10:14:48 +02:00
Arun Isaac fb8baf0c77
gnu: Add interbench. 
* gnu/packages/benchmark.scm (interbench): New variable.
 2021-05-15 13:25:33 +05:30
Guillaume Le Vaillant 75530bb503
gnu: Use gr- prefix for GNU Radio blocks. 
Almost all GNU Radio blocks use "gr-" as prefix, so let's use that.

* gnu/packages/radio.scm (gnuradio-osmosdr): Rename to ...
  (gr-osmosdr): ... this.
  (gnuradio-osmosdr): Redefine as a deprecated alias.
  (gnuradio-iqbalance): Rename to ...
  (gr-iqbal): ... this.
  (gnuradio-iqbalance): Redefine as a deprecated alias.
  (gqrx)[inputs]: Replace gnuradio-iqbalance by gr-iqbal. Replace
  gnuradio-osmosdr by gr-osmosdr.
 2021-05-15 09:12:24 +02:00
Leo Famulari 1e77c79dc5
gnu: linux-libre 5.4: Update to 5.4.119. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.119.
(linux-libre-5.4-pristine-source): Update hash.
 2021-05-14 20:19:00 -04:00
Leo Famulari 89d1e52a9e
gnu: linux-libre 5.10: Update to 5.10.37. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.37.
(linux-libre-5.10-pristine-source): Update hash.
 2021-05-14 20:18:59 -04:00