Commit graph

108831 commits

Author SHA1 Message Date
Ricardo Wurmus e08f0541b8
gnu: r-cubature: Update to 2.0.4.6.
* gnu/packages/cran.scm (r-cubature): Update to 2.0.4.6.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus d99a717afe
gnu: r-tseries: Update to 0.10-53.
* gnu/packages/cran.scm (r-tseries): Update to 0.10-53.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 172e691f34
gnu: r-sna: Update to 2.7-1.
* gnu/packages/cran.scm (r-sna): Update to 2.7-1.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 9174af0d30
gnu: r-statcheck: Update to 1.4.0.
* gnu/packages/cran.scm (r-statcheck): Update to 1.4.0.
[propagated-inputs]: Add r-rlang.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 9b06a73fad
gnu: r-statnet-common: Update to 4.8.0.
* gnu/packages/cran.scm (r-statnet-common): Update to 4.8.0.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 11128897fb
gnu: r-network: Update to 1.18.1.
* gnu/packages/cran.scm (r-network): Update to 1.18.1.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus f72edb3937
gnu: r-tinytex: Update to 0.44.
* gnu/packages/cran.scm (r-tinytex): Update to 0.44.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus f66564248c
gnu: r-vctrs: Update to 0.5.2.
* gnu/packages/cran.scm (r-vctrs): Update to 0.5.2.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 63aa70ffc4
gnu: r-utf8: Update to 1.2.3.
* gnu/packages/cran.scm (r-utf8): Update to 1.2.3.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 214346c609
gnu: r-xfun: Update to 0.37.
* gnu/packages/cran.scm (r-xfun): Update to 0.37.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 1113985a77
gnu: r-tsp: Update to 1.2-2.
* gnu/packages/cran.scm (r-tsp): Update to 1.2-2.
2023-02-18 19:56:33 +01:00
Ricardo Wurmus 7aaacd3f31
gnu: r-cli: Update to 3.6.0.
* gnu/packages/cran.scm (r-cli): Update to 3.6.0.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 0c6d303ae7
gnu: r-vcd: Update to 1.4-11.
* gnu/packages/cran.scm (r-vcd): Update to 1.4-11.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus e9048fb209
gnu: r-smurf: Update to 1.1.4.
* gnu/packages/cran.scm (r-smurf): Update to 1.1.4.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus e91463c9ac
gnu: r-ggrepel: Update to 0.9.3.
* gnu/packages/cran.scm (r-ggrepel): Update to 0.9.3.
[propagated-inputs]: Add r-withr.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 2a0d4733e3
gnu: r-recipes: Update to 1.0.4.
* gnu/packages/cran.scm (r-recipes): Update to 1.0.4.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus b02c6d2583
gnu: r-broom: Update to 1.0.3.
* gnu/packages/cran.scm (r-broom): Update to 1.0.3.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 0114596dae
gnu: r-geometry: Update to 0.4.7.
* gnu/packages/cran.scm (r-geometry): Update to 0.4.7.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 61f15b7f48
gnu: r-rpostgres: Update to 1.4.5.
* gnu/packages/cran.scm (r-rpostgres): Update to 1.4.5.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 485bdfd7d0
gnu: r-timechange: Update to 0.2.0.
* gnu/packages/cran.scm (r-timechange): Update to 0.2.0.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 76f2fbeae0
gnu: r-progressr: Update to 0.13.0.
* gnu/packages/cran.scm (r-progressr): Update to 0.13.0.
2023-02-18 19:56:32 +01:00
Ricardo Wurmus 19353560c5
gnu: r-lpsolve: Update to 5.6.18.
* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.18.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 82a684e538
gnu: r-sp: Update to 1.6-0.
* gnu/packages/cran.scm (r-sp): Update to 1.6-0.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 34be3e5a06
gnu: r-ff: Update to 4.0.9.
* gnu/packages/cran.scm (r-ff): Update to 4.0.9.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 0adddb6afd
gnu: r-rcpp: Update to 1.0.10.
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.10.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus b51965e445
gnu: r-colorspace: Update to 2.1-0.
* gnu/packages/cran.scm (r-colorspace): Update to 2.1-0.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 2674b55446
gnu: r-mapproj: Update to 1.2.11.
* gnu/packages/cran.scm (r-mapproj): Update to 1.2.11.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 8fadc29d3d
gnu: r-sass: Update to 0.4.5.
* gnu/packages/cran.scm (r-sass): Update to 0.4.5.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 3d3c264ac5
gnu: r-curl: Update to 5.0.0.
* gnu/packages/cran.scm (r-curl): Update to 5.0.0.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 9c308e864e
gnu: r-httpuv: Update to 1.6.8.
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.8.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 31e137465d
gnu: r-astsa: Update to 2.0.
* gnu/packages/cran.scm (r-astsa): Update to 2.0.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus e78754a7ca
gnu: r-ggpp: Update to 0.5.1.
* gnu/packages/cran.scm (r-ggpp): Update to 0.5.1.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus 1ff96c7db3
gnu: r-ggalluvial: Update to 0.12.4.
* gnu/packages/cran.scm (r-ggalluvial): Update to 0.12.4.
2023-02-18 19:56:31 +01:00
Ricardo Wurmus d7ac85d4e3
gnu: r-fontawesome: Update to 0.5.0.
* gnu/packages/cran.scm (r-fontawesome): Update to 0.5.0.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 0b78144688
gnu: r-abn: Update to 2.7-3.
* gnu/packages/bioconductor.scm (r-abn): Update to 2.7-3.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 854fea4618
gnu: r-wgcna: Update to 1.72-1.
* gnu/packages/bioconductor.scm (r-wgcna): Update to 1.72-1.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 7d01489a9f
gnu: r-d3r: Update to 1.0.1.
* gnu/packages/cran.scm (r-d3r): Update to 1.0.1.
[source]: Delete minified JavaScript in snippet.
[arguments]: Do not delete minified JavaScript here.
[native-inputs]: Update hash for d3.v7.js.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 41c41e9f81
gnu: r-sendmailr: Update to 1.4-0.
* gnu/packages/statistics.scm (r-sendmailr): Update to 1.4-0.
[native-inputs]: Add r-knitr.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 6a3144bd27
gnu: Add r-gfonts.
* gnu/packages/cran.scm (r-gfonts): New variable.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 2b9cb13796
gnu: r-torch: Update to 0.9.1.
* gnu/packages/cran.scm (r-torch): Update to 0.9.1.
[propagated-inputs]: Add r-glue.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 344f448d1d
gnu: liblantern: Update to 0.9.1.
* gnu/packages/machine-learning.scm (liblantern): Update to 0.9.1.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 16e0c98df7
gnu: r-flexdashboard: Update to 0.6.1.
* gnu/packages/cran.scm (r-flexdashboard): Update to 0.6.1.
[source]: Simplify and reformat snippet.
[arguments]: Remove unnecessary module import; use esbuild in
'process-javascript phase.
[native-inputs]: Replace node-uglify-js with esbuild.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 8525c26499
import/cran: Remove directory-needs-zlib? in favor of needed-libraries-in-directory.
* guix/import/cran.scm (directory-needs-zlib?): Remove procedure.
(source-dir->dependencies): Use needed-libraries-in-directory instead of
directory-needs-zlib?.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 049cff91ac
import/cran: Add generic way to detect needed libraries.
* guix/import/cran.scm (needed-libraries-in-directory): New procedure.
(libraries-pattern, packages-for-matches): New variables.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus 271c0bfcf2
import/cran: Process all vignette builders.
* guix/import/cran.scm (needs-knitr?): Remove procedure.
(vignette-builders): New procedure.
(description->package): Use vignette-builders instead of needs-knitr?.
2023-02-18 19:56:30 +01:00
Ricardo Wurmus c0507e9f1e
import/cran: Add name mapping for libjpeg.
* guix/import/cran.scm (transform-sysname): Add mapping from libjpeg to
libjpeg-turbo.
2023-02-18 19:56:29 +01:00
Ricardo Wurmus 6ce68a7a83
import/cran: Add directory-needs-esbuild?.
* guix/import/cran.scm (directory-needs-esbuild?): New procedure.
(source-dir->dependencies): Use it.
2023-02-18 19:56:29 +01:00
Ricardo Wurmus ce7e4b99f9
gnu: r-readods: Update to 1.8.0.
* gnu/packages/cran.scm (r-readods): Update to 1.8.0.
[propagated-inputs]: Add r-purrr.
[description]: Use complete sentences.
2023-02-18 19:56:29 +01:00
Ricardo Wurmus ab0e14c41a
gnu: r-liger: Rename to r-rliger.
Upstream changed the name to avoid a conflict with the liger package in CRAN.

* gnu/packages/cran.scm (r-liger): Define as a deprecated alias for...
(r-rliger): ...this new variable.
2023-02-18 19:56:29 +01:00
Tobias Geerinckx-Rice b795976778
gnu: bcachefs-tools: Update to 0.1-16.46a6b92.
* gnu/packages/file-systems.scm (bcachefs-tools):
Update to 0.1-16.46a6b92.
2023-02-12 01:00:00 +01:00