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Author SHA1 Message Date
Ricardo Wurmus dacebbf066
gnu: r-nonnest2: Update to 0.5-3. 
* gnu/packages/cran.scm (r-nonnest2): Update to 0.5-3.
[native-inputs]: Add r-knitr.
 2020-03-19 10:06:28 +01:00
Ricardo Wurmus ef1443928e
gnu: r-waveslim: Update to 1.8.2. 
* gnu/packages/cran.scm (r-waveslim): Update to 1.8.2.
 2020-03-19 10:06:28 +01:00
Ricardo Wurmus 49b68b64f7
gnu: r-ggeffects: Update to 0.14.2. 
* gnu/packages/cran.scm (r-ggeffects): Update to 0.14.2.
[native-inputs]: Add r-knitr.
 2020-03-19 10:06:28 +01:00
Ricardo Wurmus bd1a2cb2c4
gnu: r-glmmtmb: Update to 1.0.1. 
* gnu/packages/cran.scm (r-glmmtmb): Update to 1.0.1.
 2020-03-19 10:06:28 +01:00
Ricardo Wurmus 5cef0ef018
gnu: r-pwr: Update to 1.3-0. 
* gnu/packages/cran.scm (r-pwr): Update to 1.3-0.
 2020-03-19 10:06:28 +01:00
Ricardo Wurmus e6f4f314ba
gnu: r-officer: Update to 0.3.8. 
* gnu/packages/cran.scm (r-officer): Update to 0.3.8.
[propagated-inputs]: Remove r-digest.
[native-inputs]: Add r-knitr.
 2020-03-19 10:06:28 +01:00
Ricardo Wurmus 99de0bd1dc
gnu: r-recipes: Update to 0.1.10. 
* gnu/packages/cran.scm (r-recipes): Update to 0.1.10.
[native-inputs]: Add r-knitr.
 2020-03-19 10:06:27 +01:00
Ricardo Wurmus b8168e8945
gnu: r-rmysql: Update to 0.10.20. 
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.20.
 2020-03-19 10:06:27 +01:00
Ricardo Wurmus 1c7a4952ff
gnu: r-ffbase: Update to 0.12.8. 
* gnu/packages/cran.scm (r-ffbase): Update to 0.12.8.
 2020-03-19 10:06:27 +01:00
Ricardo Wurmus cabdfeab76
gnu: r-rcpp: Update to 1.0.4. 
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.4.
[native-inputs]: Remove r-knitr.
 2020-03-19 10:06:27 +01:00
Ricardo Wurmus 0776498740
gnu: r-glue: Update to 1.3.2. 
* gnu/packages/cran.scm (r-glue): Update to 1.3.2.
 2020-03-19 10:06:27 +01:00
Ricardo Wurmus 30c56e67f7
gnu: r-crosstalk: Update to 1.1.0.1. 
* gnu/packages/cran.scm (r-crosstalk): Update to 1.1.0.1.
[propagated-inputs]: Remove r-ggplot2 and r-shiny.
 2020-03-19 10:06:27 +01:00
Ricardo Wurmus 2d6a7bca9e
gnu: r-biocpkgtools: Update to 1.4.6. 
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.4.6.
[propagated-inputs]: Add r-biocfilecache, r-rappdirs, r-rlang, and
r-tidyselect.
[native-inputs]: Add r-knitr.
 2020-03-19 10:06:27 +01:00
Ricardo Wurmus f7100edaf6
gnu: r-biosigner: Update to 1.14.2. 
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.14.2.
[native-inputs]: Remove r-rmarkdown, pandoc, and pandoc-citeproc.
 2020-03-19 10:06:27 +01:00
Marius Bakke 0883f34c51
gnu: ungoogled-chromium: Update to 80.0.3987.149-0.516e2d9 [security fixes]. 
This releases fixes CVE-2020-6422, CVE-2020-6424, CVE-2020-6425,
CVE-2020-6426, CVE-2020-6427, CVE-2020-6428, CVE-2020-6429, CVE-2019-20503,
and CVE-2020-6449.

* gnu/packages/chromium.scm (%chromium-version): Set to 80.0.3987.149.
(%ungoogled-revision): Set to 516e2d990a50a4bbeb8c583e56333c2935e2af95.
(%chromium-origin, %ungoogled-origin): Update hashes.
 2020-03-19 09:09:47 +01:00
Marius Bakke baab9eef27
gnu: python2-cython: Exclude parallel tests on i686 systems. 
* gnu/packages/python-xyz.scm (python2-cython)[arguments]: When building on
i686-linux, override the 'check' phase.
 2020-03-19 08:41:51 +01:00
Marius Bakke e7a90f28cb
gnu: git: Enable parallel tests. 
* gnu/packages/version-control.scm (git)[arguments]: Remove #:parallel-testS?.
 2020-03-19 08:41:51 +01:00
Marius Bakke c7f06b2b57
gnu: varnish: Update to 6.4.0. 
* gnu/packages/web.scm (varnish): Update to 6.4.0.
 2020-03-19 08:41:50 +01:00
Marius Bakke 0029e65581
gnu: RocksDB: Update to 6.7.3. 
* gnu/packages/databases.scm (rocksdb): Update to 6.7.3.
 2020-03-19 08:41:50 +01:00
Marius Bakke 76e8818b94
gnu: wpebackend-fdo: Update to 1.6.0. 
* gnu/packages/webkit.scm (wpebackend-fdo): Update to 1.6.0.
 2020-03-19 08:41:50 +01:00
Marius Bakke 63efc495c1
gnu: libwpe: Update to 1.6.0. 
* gnu/packages/webkit.scm (libwpe): Update to 1.6.0.
 2020-03-19 08:41:50 +01:00
Marius Bakke 1912ea5003
gnu: dav1d: Update to 0.6.0. 
* gnu/packages/video.scm (dav1d): Update to 0.6.0.
 2020-03-19 08:41:50 +01:00
Marius Bakke 9a9cd9bc7b
gnu: libsoup: Update to 2.70.0. 
* gnu/packages/gnome.scm (libsoup): Update to 2.70.0.
 2020-03-19 08:41:50 +01:00
Marius Bakke aa0063a00a
gnu: libsecret: Update to 0.20.2. 
* gnu/packages/gnome.scm (libsecret): Update to 0.20.2.
 2020-03-19 08:41:50 +01:00
Marius Bakke 24b5767dad
gnu: git: Update to 2.25.2. 
* gnu/packages/version-control.scm (git): Update to 2.25.2.
 2020-03-19 08:41:49 +01:00
Marius Bakke c6d24c091c
gnu: OpenSSL: Update replacement to 1.1.1e [fixes CVE-2019-1551]. 
* gnu/packages/tls.scm (openssl-1.1.1d): Rename to ...
(openssl-1.1.1e): ... this.  Update to 1.1.1e.
(openssl)[replacement]: Adjust accordingly.
 2020-03-19 08:41:49 +01:00
Marius Bakke 05e783871c
build-self: Import (ice-9 threads) in the compute-guix-derivation script. 
This is required for CALL-WITH-NEW-THREAD in Guile 3.0.

* build-aux/build-self.scm (build-program): Import (ice-9 threads).
 2020-03-19 08:41:49 +01:00
Pierre Neidhardt 78cb0f3cf8
gnu: sbcl-cl-webkit: Update to 20200319. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-webkit): Update to 20200319.
 2020-03-19 07:44:34 +01:00
Tobias Geerinckx-Rice 58d9027412
gnu: glances: Deprecate python- prefix. 
* gnu/package/python-xyz.scm (glances): New public variable renamed
from……
(python-glances): …this now-deprecated one.
 2020-03-19 02:30:38 +01:00
Tobias Geerinckx-Rice 16b8503f55
gnu: Remove python2-glances variant. 
* gnu/packages/python-xyz.scm (python2-glances): Remove variable.
 2020-03-19 02:30:37 +01:00
Tobias Geerinckx-Rice b8e777efcf
gnu: python-glances: Update to 3.1.4. 
* gnu/packages/python-xyz.scm (python-glances): Update to 3.1.4.
 2020-03-19 02:30:37 +01:00
Tobias Geerinckx-Rice bfa368ed0a
gnu: aircrack-ng: Update to 1.6. 
* gnu/packages/networking.scm (aircrack-ng): Update to 1.6.
 2020-03-19 02:30:36 +01:00
Tobias Geerinckx-Rice f44c555b7d
gnu: neomutt: Update to 20200313. 
* gnu/packages/mail.scm (neomutt): Update to 20200313.
 2020-03-19 02:30:36 +01:00
Tobias Geerinckx-Rice 85b9ae93f0
gnu: Use HTTPS for supported psyc.eu subdomains. 
* gnu/packages/messaging.scm (libpsyc)[home-page]: Use HTTPS.
(perl-net-psyc)[source, description, home-page]: Likewise.
 2020-03-19 02:28:52 +01:00
Tobias Geerinckx-Rice 619ffa02ef
gnu: camlp5: Update home page. 
* gnu/packages/ocaml.scm (camlp5)[home-page]: Update.
 2020-03-19 02:28:37 +01:00
Tobias Geerinckx-Rice 4a0399e277
gnu: jrnl: Use HTTPS home page. 
* gnu/packages/jrnl.scm (jrnl)[home-page]: Use HTTPS.
 2020-03-19 00:45:16 +01:00
Tobias Geerinckx-Rice 2e7d1c567d
gnu: libmygpo-qt: Update home page. 
* gnu/packages/gpodder.scm (libmygpo-qt)[home-page]: Update.
 2020-03-19 00:45:06 +01:00
Tobias Geerinckx-Rice 0c34b5e6d0
gnu: camlzip: Update home page. 
* gnu/packages/ocaml.scm (camlzip)[home-page]: Update.
 2020-03-19 00:44:53 +01:00
Tobias Geerinckx-Rice a79b7ab5a2
gnu: lablgtk: Update to 2.18.10. 
* gnu/packages/ocaml.scm (lablgtk): Update to 2.18.10.
 2020-03-19 00:42:17 +01:00
Tobias Geerinckx-Rice 6d27891aa0
gnu: bind: Update to 9.16.1. 
* gnu/packages/dns.scm (isc-bind): Update to 9.16.1.
 2020-03-19 00:42:17 +01:00
Tobias Geerinckx-Rice 30ae1e8c94
gnu: inxi-minimal: Update to 3.0.38-1. 
* gnu/packages/admin.scm (inxi-minimal): Update to 3.0.38-1.
 2020-03-19 00:42:17 +01:00
Tobias Geerinckx-Rice f73c1a48ce
gnu: chafa: Update to 1.2.2. 
* gnu/packages/image-viewers.scm (chafa): Update to 1.2.2.
 2020-03-19 00:42:17 +01:00
Tobias Geerinckx-Rice 1b9e1648f6
gnu: workrave: Update to 1.10.37. 
* gnu/packages/gnome.scm (workrave): Update to 1.10.37.
[arguments]: Disable #:tests?.
 2020-03-19 00:42:16 +01:00
Tobias Geerinckx-Rice 8826b792d8
gnu: dovecot: Use libsodium. 
This adds support for ARGON2I and ARGON2ID password hashing in exchange
for a <1% increase in closure size.

* gnu/packages/mail.scm (dovecot)[inputs]: Add libsodium.
(dovecot-libsodium-plugin)[description]: Note its use.
 2020-03-19 00:42:16 +01:00
Tobias Geerinckx-Rice d6894b95ec
gnu: dovecot: Use SQLite. 
* gnu/packages/mail.scm (dovecot)[arguments]: Add "--with-sqlite"
to #:configure-flags.
 2020-03-19 00:42:16 +01:00
Tobias Geerinckx-Rice 181d19ab2c
gnu: extempore: Use HTTPS home page. 
* gnu/packages/music.scm (extempore)[home-page]: Use HTTPS.
 2020-03-19 00:42:13 +01:00
Tobias Geerinckx-Rice 51d9c867aa
gnu: r-rhpcblasctl: Use HTTPS home page. 
* gnu/packages/cran.scm (r-rhpcblasctl)[home-page]: Use HTTPS.
 2020-03-19 00:42:13 +01:00
Tobias Geerinckx-Rice 0e2e942515
gnu: r-snowfall: Use HTTPS home page. 
* gnu/packages/cran.scm (r-snowfall)[home-page]: Use HTTPS.
 2020-03-19 00:42:12 +01:00
Tobias Geerinckx-Rice 48a13b4b82
gnu: Use HTTPS for non.tuxfamily.org home pages. 
* gnu/packages/music.scm (non-timeline, non-mixer, non-session-manager)
(non-sequencer)[home-page]: Use HTTPS.
 2020-03-19 00:41:40 +01:00
Nicolas Goaziou db483baa1a
gnu: emacs-org-static-blog: Fix typo in description. 
* gnu/packages/emacs-xyz.scm (emacs-org-static-blog)[description]: Fix typo.
 2020-03-18 21:50:14 +01:00