TakeV/guix
1
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity
54471 commits 103 branches 35 tags 487 MiB
Commit graph

54471 commits

This branch
This branch
All branches
Author SHA1 Message Date
Ludovic Courtès
cd903b0443
git-authenticate: Add roptat's new key. 
This is a followup to 2cbede5935.

* build-aux/git-authenticate.scm (%committers): Add roptat's new key.
 2020-01-27 23:03:07 +01:00
Ludovic Courtès
150c38c2ed
gnu: sicp: Do not import module from the host Guile. 
This is a followup to 4144eb195c
and 5e61de2421.

* gnu/packages/scheme.scm (sicp)[arguments]: Remove (srfi srfi-26) from
 #:modules.
 2020-01-27 23:03:07 +01:00
Roel Janssen
a38bf7c843
gnu: Add r-deconstructsigs. 
* gnu/packages/bioconductor.scm (r-deconstructsigs): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2020-01-27 22:31:19 +01:00
Danny Milosavljevic
4fc4e5fdd9
gnu: gnome: Remove gnome-initial-setup. 
Fixes <https://bugs.gnu.org/39281>
Reported by Jack Hill <jackhill@jackhill.us>.

* gnu/packages/gnome.scm (gnome)[propagated-inputs]: Remove
gnome-initial-setup.
 2020-01-27 21:26:10 +01:00
Ricardo Wurmus
94600c3960
gnu: r-gviz: Update to 1.30.1. 
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.30.1.
 2020-01-27 20:48:36 +01:00
Ricardo Wurmus
c7b98a84d9
gnu: r-genomicfeatures: Update to 1.38.1. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.38.1.
 2020-01-27 20:48:36 +01:00
Ricardo Wurmus
caf4290bd8
gnu: r-s4vectors: Update to 0.24.3. 
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.24.3.
 2020-01-27 20:48:36 +01:00
Ricardo Wurmus
0dfaebfa2e
gnu: r-multiassayexperiment: Update to 1.12.2. 
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.2.
 2020-01-27 20:48:36 +01:00
Ricardo Wurmus
c5d75df366
gnu: r-ropls: Update to 1.18.8. 
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.18.8.
 2020-01-27 20:48:36 +01:00
Ricardo Wurmus
062cbc4f2b
gnu: r-destiny: Update to 3.0.1. 
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.0.1.
 2020-01-27 20:48:36 +01:00
Mark H Weaver
678f651e8d
gnu: linux-libre@4.19: Update to 4.19.99. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.99.
(linux-libre-4.19-pristine-source): Update hash.
 2020-01-27 14:38:13 -05:00
Mark H Weaver
3c6332128a
gnu: linux-libre@4.14: Update to 4.14.168. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.168.
(linux-libre-4.14-pristine-source): Update hash.
 2020-01-27 14:37:16 -05:00
Pierre Neidhardt
11f46dc9de
gnu: emacs-gif-screencast: Update to 1.1. 
* gnu/packages/emacs-xyz.scm (emacs-gif-screencast): Update to 1.1.
 2020-01-27 20:28:55 +01:00
Amin Bandali
fcb510c541
gnu: light: Install udev rules to allow sudo-less invocations. 
* gnu/packages/linux.scm (light)[arguments]: Substitute the absolute paths
of chgrp and chmod in 90-backlight.rules and install the rules file to the
special lib/udev/rules.d/ directory of the out output.  This allows for
any member of the video group to set brightness using light without sudo.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-27 19:58:21 +02:00
Efraim Flashner
61b95c15cf
build: cargo-build-system: Add pkg-config environment variables. 
* guix/build/cargo-build-system.scm (configure): Add environment
variables to use system libgit2 and libssh2.
* gnu/packages/crates-io.scm (rust-libgit2-sys-0.10,
rust-libssh2-sys-0.2)[arguments]: Remove LIBGIT2 and LIBSSH2 environment
variable settings.
* gnu/packages/rust-apps.scm (tokei)[arguments]: Same.
 2020-01-27 18:39:10 +02:00
Efraim Flashner
d0c4d1abfe
gnu: rust-pcre2-sys-0.2: Delete vendored code. 
* gnu/packages/crates-io.scm (rust-pcre2-sys-0.2)[source]: Delete
vendored code.
[arguments]: Remove custom phase.
(rust-pcre2-0.2, rust-grep-pcre2-0.1)[arguments]: Enable build.
[native-inputs]: Add pkg-config, pcre2.
 2020-01-27 18:36:12 +02:00
Efraim Flashner
d6dde77d7f
gnu: rust-libz-sys-1.0: Remove vendored code. 
* gnu/packages/crates-io.scm (rust-libz-sys-1.0)[source]: Remove
vendored code.
[arguments]: Remove custom phase.
(rust-libgit2-sys-0.10)[arguments]: Don't unvendor missing code.
(rust-libssh2-sys-0.2)[arguments]: Same.
* gnu/packages/rust-apps.scm (tokei)[arguments]: Same.
 2020-01-27 18:36:12 +02:00
Efraim Flashner
bba73d473a
gnu: rust-lzma-sys-0.1: Remove vendored code. 
* gnu/packages/crates-io.scm (rust-lzma-sys-0.1)[source]: Remove
vendored code.
[arguments]: Remove custom phase.
 2020-01-27 18:36:12 +02:00
Efraim Flashner
ad03f50fa8
gnu: rust-libssh2-sys-0.2: Remove vendored code. 
* gnu/packages/crates-io.scm (rust-libssh2-sys-0.2)[source]: Remove
vendored code.
[arguments]: Don't remove missing vendored code.
(rust-libgit2-sys-0.10)[arguments]: Same.
* gnu/packages/rust-apps.scm (tokei)[arguments]: Same.
 2020-01-27 18:36:11 +02:00
Efraim Flashner
e2302953d5
gnu: rust-jemalloc-sys-0.3: Remove vendored code. 
* gnu/packages/crates-io.scm (rust-jemalloc-sys-0.3)[source]: Remove
vendored code.
[arguments]: Don't remove missing vendored code.
 2020-01-27 18:36:11 +02:00
Efraim Flashner
0173e69f52
gnu: rust-libgit2-sys-0.10: Remove vendored code. 
* gnu/packages/crates-io.scm (rust-libgit2-sys-0.10)[source]: Remove
vendored code.
[arguments]: Don't remove missing vendored code.
* gnu/packages/rust-apps.scm (tokei)[arguments]: Same.
 2020-01-27 18:36:11 +02:00
Efraim Flashner
a13db7e2ab
build: cargo-build-system: Allow patched crates. 
* guix/build/cargo-build-system.scm (crate-src?): Don't check for a
gzipped tarball, just make sure it's not a directory.
 2020-01-27 18:36:11 +02:00
Ricardo Wurmus
2afae7fc9a
gnu: r-fpc: Update to 2.2-4. 
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-4.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
2c676da719
gnu: r-rrcov: Update to 1.5-2. 
* gnu/packages/statistics.scm (r-rrcov): Update to 1.5-2.
[propagated-inputs]: Remove r-cluster.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
1003fd5142
gnu: r-tidyr: Update to 1.0.2. 
* gnu/packages/statistics.scm (r-tidyr): Update to 1.0.2.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
68146b9605
gnu: r-rngtools: Update to 1.5. 
* gnu/packages/statistics.scm (r-rngtools): Update to 1.5.
[propagated-inputs]: Remove r-pkgmaker and r-stringr.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
0d3d193476
gnu: r-pkgmaker: Update to 0.31. 
* gnu/packages/statistics.scm (r-pkgmaker): Update to 0.31.
[propagated-inputs]: Add r-assertthat.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
b4a374ec99
gnu: r-xml: Update to 3.99-0.3. 
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.3.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
1cc17e37ae
gnu: r-blob: Update to 1.2.1. 
* gnu/packages/statistics.scm (r-blob): Update to 1.2.1.
[propagated-inputs]: Remove r-prettyunits.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
af837b9964
gnu: r-rmarkdown: Update to 2.1. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.1.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
8d9e85221f
gnu: r-catools: Update to 1.18.0. 
* gnu/packages/statistics.scm (r-catools): Update to 1.18.0.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
564c3330ed
gnu: r-rcpparmadillo: Update to 0.9.800.4.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.800.4.0.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
c6d1b5dafb
gnu: r-rlang: Update to 0.4.3. 
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.3.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
545ebafe83
gnu: r-knitr: Update to 1.27. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.27.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
6748b6b458
gnu: r-foreign: Update to 0.8-75. 
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-75.
 2020-01-27 16:33:30 +01:00
Ricardo Wurmus
7dd0af28f7
gnu: r-shinycssloaders: Update to 0.3. 
* gnu/packages/cran.scm (r-shinycssloaders): Update to 0.3.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
ba6d9fdcf3
gnu: r-idpmisc: Update to 1.1.20. 
* gnu/packages/cran.scm (r-idpmisc): Update to 1.1.20.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
05e2ed8b4f
gnu: r-rngwell: Update to 0.10-6. 
* gnu/packages/cran.scm (r-rngwell): Update to 0.10-6.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
328b5dde4b
gnu: r-bio3d: Update to 2.4-1. 
* gnu/packages/cran.scm (r-bio3d): Update to 2.4-1.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
5cda9ff27a
gnu: r-parameters: Update to 0.4.1. 
* gnu/packages/cran.scm (r-parameters): Update to 0.4.1.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
394fb5f38e
gnu: r-leiden: Update to 0.3.2. 
* gnu/packages/cran.scm (r-leiden): Update to 0.3.2.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
725086177a
gnu: r-rhpcblasctl: Update to 0.20-17. 
* gnu/packages/cran.scm (r-rhpcblasctl): Update to 0.20-17.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
d3f58abbec
gnu: r-threejs: Update to 0.3.3. 
* gnu/packages/cran.scm (r-threejs): Update to 0.3.3.
[native-inputs]: Use jquery 1.12.4 and threejs version r111.
[arguments]: Adjust.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
93e63562fb
gnu: r-farver: Update to 2.0.3. 
* gnu/packages/cran.scm (r-farver): Update to 2.0.3.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
105639ce33
gnu: r-adegenet: Update to 2.1.2. 
* gnu/packages/cran.scm (r-adegenet): Update to 2.1.2.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
107c14ba84
gnu: r-cobs: Update to 1.3-4. 
* gnu/packages/cran.scm (r-cobs): Update to 1.3-4.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
88bdfd704b
gnu: r-dorng: Update to 1.8.2. 
* gnu/packages/cran.scm (r-dorng): Update to 1.8.2.
[propagated-inputs]: Remove r-pkgmaker.
 2020-01-27 16:33:29 +01:00
Ricardo Wurmus
9073c464e5
gnu: r-future: Update to 1.16.0. 
* gnu/packages/cran.scm (r-future): Update to 1.16.0.
 2020-01-27 16:33:28 +01:00
Ricardo Wurmus
6c6d051322
gnu: r-rmpfr: Update to 0.8-1. 
* gnu/packages/cran.scm (r-rmpfr): Update to 0.8-1.
[inputs]: Add gmp.
[native-inputs]: Add pkg-config.
 2020-01-27 16:33:28 +01:00
Ricardo Wurmus
6378827a71
gnu: r-gmp: Update to 0.5-13.6. 
* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.6.
 2020-01-27 16:33:28 +01:00