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50365 commits

Author SHA1 Message Date
Ricardo Wurmus
2295a17e64
gnu: r-roxygen2: Update to 7.0.0.
* gnu/packages/statistics.scm (r-roxygen2): Update to 7.0.0.
[propagated-inputs]: Add r-rlang.
2019-11-14 10:14:08 +01:00
Ricardo Wurmus
30301c0993
gnu: r-r6: Update to 2.4.1.
* gnu/packages/statistics.scm (r-r6): Update to 2.4.1.
2019-11-14 10:14:08 +01:00
Ricardo Wurmus
3d2c2a55fd
gnu: r-testthat: Update to 2.3.0.
* gnu/packages/statistics.scm (r-testthat): Update to 2.3.0.
[propagated-inputs]: Add r-ellipsis and r-pkgload.
2019-11-14 10:14:08 +01:00
Ricardo Wurmus
bc697e716d
gnu: r-knitr: Update to 1.26.
* gnu/packages/statistics.scm (r-knitr): Update to 1.26.
2019-11-14 10:14:08 +01:00
Ricardo Wurmus
44ffff99d3
gnu: r-survival: Update to 3.1-7.
* gnu/packages/statistics.scm (r-survival): Update to 3.1-7.
2019-11-14 10:14:08 +01:00
Ricardo Wurmus
f4061505dc
gnu: r-farver: Update to 2.0.1.
* gnu/packages/cran.scm (r-farver): Update to 2.0.1.
[propagated-inputs]: Remove r-rcpp.
2019-11-14 10:14:08 +01:00
Ricardo Wurmus
f72874fe26
gnu: r-ggeffects: Update to 0.13.0.
* gnu/packages/cran.scm (r-ggeffects): Update to 0.13.0.
[propagated-inputs]: Remove r-scales.
2019-11-14 10:14:08 +01:00
Ricardo Wurmus
389f169a7e
gnu: r-learnr: Update to 0.10.0.
* gnu/packages/cran.scm (r-learnr): Update to 0.10.0.
[propagated-inputs]: Add r-checkmate, r-ellipsis, and r-renv.
2019-11-14 10:14:08 +01:00
Ricardo Wurmus
a6412edf29
gnu: r-ggfortify: Update to 0.4.8.
* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.8.
2019-11-14 10:14:08 +01:00
Ricardo Wurmus
17c5b6fcce
gnu: r-kernlab: Update to 0.9-29.
* gnu/packages/cran.scm (r-kernlab): Update to 0.9-29.
2019-11-14 10:14:07 +01:00
Ricardo Wurmus
e6f1468c93
gnu: r-bookdown: Update to 0.15.
* gnu/packages/cran.scm (r-bookdown): Update to 0.15.
2019-11-14 10:14:07 +01:00
Ricardo Wurmus
d4f4b30bbc
gnu: r-future: Update to 1.15.0.
* gnu/packages/cran.scm (r-future): Update to 1.15.0.
2019-11-14 10:14:07 +01:00
Ricardo Wurmus
610f2acc7c
gnu: r-rbamtools: Update to 2.16.17.
* gnu/packages/cran.scm (r-rbamtools): Update to 2.16.17.
2019-11-14 10:14:06 +01:00
Ricardo Wurmus
e5a06add04
gnu: r-fields: Update to 10.0.
* gnu/packages/cran.scm (r-fields): Update to 10.0.
2019-11-14 10:14:06 +01:00
Ricardo Wurmus
b32172cab6
gnu: r-spam: Update to 2.4-0.
* gnu/packages/cran.scm (r-spam): Update to 2.4-0.
2019-11-14 10:14:05 +01:00
Ricardo Wurmus
0da4cb546a
gnu: r-rcppannoy: Update to 0.0.14.
* gnu/packages/cran.scm (r-rcppannoy): Update to 0.0.14.
2019-11-14 10:14:05 +01:00
Ricardo Wurmus
5fbd92469d
gnu: r-rvcheck: Update to 0.1.6.
* gnu/packages/cran.scm (r-rvcheck): Update to 0.1.6.
2019-11-14 10:14:05 +01:00
Ricardo Wurmus
aa3d1dca60
gnu: r-rootsolve: Update to 1.8.1.
* gnu/packages/cran.scm (r-rootsolve): Update to 1.8.1.
2019-11-14 10:14:05 +01:00
Ricardo Wurmus
56b88f6c8d
gnu: r-flextable: Update to 0.5.6.
* gnu/packages/cran.scm (r-flextable): Update to 0.5.6.
2019-11-14 10:14:05 +01:00
Ricardo Wurmus
7f4025aa83
gnu: r-officer: Update to 0.3.6.
* gnu/packages/cran.scm (r-officer): Update to 0.3.6.
2019-11-14 10:14:05 +01:00
Ricardo Wurmus
b0fd313e38
gnu: r-rjags: Update to 4-10.
* gnu/packages/cran.scm (r-rjags): Update to 4-10.
2019-11-14 10:14:05 +01:00
Ricardo Wurmus
1ca049273c
gnu: r-ggpubr: Update to 0.2.4.
* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.4.
2019-11-14 10:14:05 +01:00
Ricardo Wurmus
383ab0daa2
gnu: r-openxlsx: Update to 4.1.3.
* gnu/packages/cran.scm (r-openxlsx): Update to 4.1.3.
[propagated-inputs]: Add r-rlang and r-stringi.
2019-11-14 10:14:05 +01:00
Ricardo Wurmus
36b7a23f83
gnu: r-tinytex: Update to 0.17.
* gnu/packages/cran.scm (r-tinytex): Update to 0.17.
2019-11-14 10:14:04 +01:00
Ricardo Wurmus
58fb4f3207
gnu: r-xfun: Update to 0.11.
* gnu/packages/cran.scm (r-xfun): Update to 0.11.
2019-11-14 10:14:03 +01:00
Ricardo Wurmus
aba7435f80
gnu: r-prodlim: Update to 2019.10.13.
* gnu/packages/cran.scm (r-prodlim): Update to 2019.10.13.
2019-11-14 10:14:03 +01:00
Ricardo Wurmus
8b4178cd94
gnu: r-rcpp: Update to 1.0.3.
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.3.
2019-11-14 10:14:03 +01:00
Ricardo Wurmus
65d81e7513
gnu: r-haven: Update to 2.2.0.
* gnu/packages/cran.scm (r-haven): Update to 2.2.0.
[propagated-inputs]: Add r-rlang and r-tidyselect.
2019-11-14 10:14:03 +01:00
Ricardo Wurmus
a9b6601908
gnu: Add r-renv.
* gnu/packages/cran.scm (r-renv): New variable.
2019-11-14 10:14:03 +01:00
Efraim Flashner
7696af421b
gnu: links: Update to 2.20.2.
* gnu/packages/web-browsers.scm (links): Update to 2.20.2.
2019-11-14 10:45:51 +02:00
Alexandros Theodotou
bcf851bc4a
gnu: Add avldrums-lv2.
* gnu/packages/music.scm: (avldrums-lv2): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-11-14 00:16:12 +01:00
Alexandros Theodotou
5b1bf92e16
gnu: Add dpf-plugins.
* gnu/packages/music.scm: (dpf-plugins): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-11-14 00:16:12 +01:00
Marius Bakke
2f491b884d
gnu: geonkick: Do not use unstable source tarball.
* gnu/packages/music.scm (geonkick)[source]: Change to GIT-FETCH.
2019-11-14 00:16:12 +01:00
Alexandros Theodotou
2ac65b9cbd
gnu: Add geonkick.
* gnu/packages/music.scm: (geonkick): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-11-14 00:16:11 +01:00
Marius Bakke
83ba0e4291
gnu: redkite: Do not use unstable tarball.
* gnu/packages/audio.scm (redkite)[source]: Change to GIT-FETCH.
2019-11-14 00:16:11 +01:00
Alexandros Theodotou
74f9a8fbbe
gnu: Add redkite.
* gnu/packages/audio.scm: (redkite): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-11-14 00:16:11 +01:00
Alexandros Theodotou
9a00130a94
gnu: Add zam-plugins.
* gnu/packages/music.scm: (zam-plugins): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-11-14 00:16:11 +01:00
Alexandros Theodotou
fe06a6ee70
gnu: Add x42-plugins.
* gnu/packages/music.scm: (x42-plugins): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-11-14 00:16:11 +01:00
Alexandros Theodotou
0f2ce44800
gnu: Add libltc.
* gnu/packages/audio.scm: (libltc): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-11-14 00:16:11 +01:00
Alexandros Theodotou
5182fbe063
gnu: Add sherlock-lv2.
* gnu/packages/music.scm: (sherlock-lv2): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-11-14 00:16:11 +01:00
Marius Bakke
95f6e6dad8
gnu: sratom: Adjust indentation.
* gnu/packages/audio.scm (sratom): Re-indent.
2019-11-14 00:16:11 +01:00
Marius Bakke
6e0b18bf09
gnu: sratom: Propagate required inputs.
* gnu/packages/audio.scm (sratom)[inputs]: Change to ...
[propagated-inputs]: ... this.
2019-11-14 00:16:11 +01:00
David Wilson
35338b5001
gnu: Add emacs-spacegray-theme.
* gnu/packages/emacs-xyz.scm (emacs-spacegray-theme) New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-11-13 23:26:36 +01:00
Kyle Meyer
b057921b17
doc: Drop stray quotation mark.
* doc/guix.texi (Invoking guix publish): Drop stray quotation mark.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-11-13 23:26:36 +01:00
Ludovic Courtès
1f8ca28b9e
services: dbus: Simplify 'dbus-uuidgen' invocation.
* gnu/services/dbus.scm (dbus-activation): Use the "--ensure" option of
'dbus-uuidgen' instead of forking and redirecting ports.
2019-11-13 23:26:36 +01:00
Ludovic Courtès
7462a1de22
services: dbus: Log to syslog.
* gnu/services/dbus.scm (dbus-shepherd-service): Add 'syslogd' to
'requirement'.  Pass the "--syslog-only" command-line option.
2019-11-13 23:26:36 +01:00
Ludovic Courtès
a01d2e300a
services: dbus: Add description.
* gnu/services/dbus.scm (dbus-root-service-type)[description]: New
field.
2019-11-13 23:26:36 +01:00
Ludovic Courtès
298fb2907e
daemon: Don't include <linux/fs.h>.
As of GNU libc 2.29, <sys/mount.h> declares all the constants and
functions we need, so there's no use in including <linux/fs.h> anymore.
This silences annoying warnings like this one:

  In file included from nix/libstore/local-store.cc:32:0:
  /gnu/store/…-linux-libre-headers-4.19.56/include/linux/fs.h:108:0: warning: "MS_RDONLY" redefined
   #define MS_RDONLY  1 /* Mount read-only */

  In file included from nix/libstore/local-store.cc:28:0:
  /gnu/store/…-glibc-2.29/include/sys/mount.h:36:0: note: this is the location of the previous definition
   #define MS_RDONLY MS_RDONLY

* config-daemon.ac: Remove check for <linux/fs.h>.
* nix/libstore/build.cc: Remove conditional inclusion of <linux/fs.h>.
* nix/libstore/local-store.cc: Remove "#if HAVE_LINUX_FS_H" and
inclusion of <linux/fs.h>.
2019-11-13 23:26:35 +01:00
Ludovic Courtès
887fd835a7
tests: "make check-system" uses Guix built with (guix self).
This is a followup to 7e6d8d366a.
It means that "make check-system" can run tests from (gnu tests install)
much faster because it does not need to build a full 'guix' package.

* gnu/ci.scm (channel-instance->package): Export.
* build-aux/run-system-tests.scm (tests-for-channel-instance): New
procedure, with code formerly in 'run-system-tests'.
(run-system-tests): Call 'interned-file' for SOURCE, and add call to
'tests-for-channel-instance'.
2019-11-13 23:26:35 +01:00
Julien Lepiller
f041db8696
gnu: Add josm.
* gnu/packages/geo.scm (josm): New variable.
2019-11-13 22:49:55 +01:00