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24641 commits

Author SHA1 Message Date
Ludovic Courtès
b27ce4164a
services: gnome: Register more polkit actions.
This should allow more operations such as changing the system date and
time via the Control Center (reported at
<https://lists.gnu.org/archive/html/help-guix/2016-09/msg00059.html>),
performing "file operations" via gvfs, and interacting with processes
using the System Monitor.

* gnu/services/desktop.scm (gnome-polkit-settings): New procedure.
(gnome-desktop-service-type): Use it in POLKIT-SERVICE-TYPE extension.
2017-10-11 23:00:46 +02:00
Tobias Geerinckx-Rice
22345a8ed7
gnu: mobile-broadband-provider-info: Update to 20170310.
* gnu/packages/gnome.scm (mobile-broadband-provider-info): Update to 20170310.
2017-10-11 21:53:37 +02:00
Tobias Geerinckx-Rice
be84a1231e
gnu: dovecot: Update to 2.2.33.1.
* gnu/packages/mail.scm (dovecot): Update to 2.2.33.1.
2017-10-11 21:53:36 +02:00
Tobias Geerinckx-Rice
3bf42e22b3
gnu: gparted: Update to 0.30.0.
* gnu/packages/disk.scm (gparted): Update to 0.30.0.
2017-10-11 21:53:36 +02:00
Tobias Geerinckx-Rice
f9bd6b3aef
gnu: evince: Update to 3.26.0.
* gnu/packages/gnome.scm (evince): Update to 3.26.0.
2017-10-11 21:53:36 +02:00
Tobias Geerinckx-Rice
f51ea1cd61
gnu: orca: Update to 3.26.0.
gnu/packages/gnome.scm (orca): Update to 3.26.0.
2017-10-11 21:53:35 +02:00
Thomas Danckaert
de47cfed13
gnu: bluez: Disable unpredictable test on armhf.
* gnu/packages/linux.scm (bluez): [arguments] Add phase to skip a test instead
of marking it as XFAIL.
2017-10-11 21:44:06 +02:00
Ricardo Wurmus
01d87d3c18
gnu: rcas-web: Update to 0.0.4.
* gnu/packages/bioinformatics.scm (rcas-web): Update to 0.0.4.
2017-10-11 21:37:37 +02:00
Ludovic Courtès
85a2b58987
zlib: Fix memory leak due to revealed ports not being GC'd.
Fixes <https://bugs.gnu.org/28784>.

This mostly reverts 81a0f1cdf1, which
introduced a regression: revealed ports are *never* GC'd (contrary to
what Guile's manual suggests).

In addition to the revert, 'close-procedure' now explicitly swallows
EBADF errors when 'close-port' is called.

* guix/zlib.scm (close-procedure): New procedure.
(make-gzip-input-port)[gzfile]: Use 'fileno' instead of 'port->fdes'.
Use 'close-procedure' instead of 'gzclose'.
(make-gzip-output-port): Likewise.
* tests/zlib.scm ("compression/decompression pipe"): Use 'port-closed?'
to determine whether PARENT has been closed.
2017-10-11 15:20:50 +02:00
Leo Famulari
5781c7dd27
gnu: mpg123: Update to 1.25.7.
* gnu/packages/mp3.scm (mpg123): Update to 1.25.7.
2017-10-11 08:24:13 -04:00
Ludovic Courtès
50fcf37c13
doc: Give an example with a FAT UUID.
* gnu/system/examples/lightweight-desktop.tmpl <file-systems>: Add a
UUID for the /boot/efi partition.
* doc/guix.texi (Using the Configuration System): Mention it.
2017-10-11 11:12:33 +02:00
Ludovic Courtès
03f66aea63
uuid: Change "fat32" to "fat".
* gnu/system/uuid.scm (%fat32-endianness): Rename to...
(%fat-endianness): ... this.
(fat32-uuid->string): Rename to...
(fat-uuid->string): ... this.
(%fat32-uuid-rx): Rename to..
(%fat-uuid-rx): ... this.
(string->fat32-uuid): Rename to...
(string->fat-uuid): ... this.
(%uuid-parsers, %uuid-printers): Add 'fat16.
2017-10-11 11:12:33 +02:00
Ludovic Courtès
88235675fc
file-systems: Add support for FAT16.
* gnu/build/file-systems.scm (check-fat32-file-system): Rename to...
(check-fat-file-system): ... this.
(check-file-system): Adjust accordingly.
(fat16-superblock?, read-fat16-superblock)
(fat16-superblock-uuid, fat16-superblock-volume-name): New procedures.
(%partition-label-readers, %partition-uuid-readers): Add FAT16.
2017-10-11 11:12:33 +02:00
Ludovic Courtès
9976c76aab
file-systems: Preserve UUID types when serializing.
Reported by Roel Janssen <roel@gnu.org>
at <https://lists.gnu.org/archive/html/help-guix/2017-09/msg00094.html>.

* gnu/system/file-systems.scm (file-system->spec): When DEVICE is a
UUID, serialize it in a way that preserves its type.
(spec->file-system): Adjust accordingly.
* gnu/build/file-systems.scm (canonicalize-device-spec): Add case for
when SPEC is 'uuid?'.
2017-10-11 11:12:33 +02:00
Ludovic Courtès
1c65cca574
file-systems: 'mount-file-system' now takes a <file-system> object.
* gnu/build/file-systems.scm (mount-file-system): Rename 'spec' to 'fs'
and assume it's a <file-system>.
* gnu/build/linux-boot.scm (boot-system): Assume MOUNTS is a list of
<file-system> and adjust accordingly.
* gnu/build/linux-container.scm (mount-file-systems): Remove
'file-system->spec' call.
* gnu/services/base.scm (file-system-shepherd-service): Add
'spec->file-system' call.  Add (gnu system file-systems) to 'modules'.
* gnu/system/linux-initrd.scm (raw-initrd): Use (gnu system
file-systems).  Add 'spec->file-system' call for #:mounts.
2017-10-11 11:12:33 +02:00
Theodoros Foradis
f26af33aec
gnu: Add freehdl.
* gnu/packages/engineering.scm (freehdl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-11 11:12:33 +02:00
Theodoros Foradis
91cabd3e58
gnu: Add xyce-parallel.
* gnu/packages/engineering.scm (trilinos-parallel-xyce)
(xyce-parallel): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-11 11:12:33 +02:00
Theodoros Foradis
1da02b6a49
gnu: Add xyce-serial.
* gnu/packages/engineering.scm (trilinos-serial-xyce)
(xyce-serial): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-11 11:12:33 +02:00
Theodoros Foradis
b509efb385
gnu: Add lapack-3.5.
* gnu/packages/maths.scm (lapack-3.5): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-11 11:12:33 +02:00
Ricardo Wurmus
22d1060eff
gnu: python-rpy2: Ignore test results.
* gnu/packages/python.scm (python-rpy2)[arguments]: Ignore test failures.
2017-10-11 11:06:05 +02:00
Roel Janssen
6de897ac5a
gnu: Add r-ggdendro.
* gnu/packages/statistics.scm (r-ggdendro): New variable.
2017-10-11 10:02:08 +02:00
Mark H Weaver
2f44e7b036
gnu: linux-libre@4.9: Update to 4.9.54.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.54.
2017-10-11 00:39:27 -04:00
Mark H Weaver
dac1d8efd4
gnu: linux-libre@4.4: Update to 4.4.91.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.91.
2017-10-11 00:38:46 -04:00
Eric Bavier
7740228e35
build: Set 'NIX_BUILD_HOOK' only if offloading is configured.
This prevents libstore/build.cc from executing nix/scripts/offload, which is
always created by config.status, when offload support is not enabled.

* build-aux/pre-inst-env.in: Export 'NIX_BUILD_HOOK' only when
configured; unset it otherwise.
2017-10-10 23:16:07 -05:00
Tobias Geerinckx-Rice
c3bece41b7
gnu: dovecot: Update to 2.2.33.
* gnu/packages/mail.scm (dovecot): Update to 2.2.33.
2017-10-10 23:42:35 +02:00
Ludovic Courtès
db9c49f499
gnu: games: Remove unneeded import.
Fixes a regression introduced in
42abb842f6.

* gnu/packages/games.scm: Remove unneeded (guix build utils) import,
which led to a name clash on 'which'.
2017-10-10 23:12:04 +02:00
Ludovic Courtès
90eaa9419a
import: cpan: Load (gnu packages perl) lazily.
* guix/import/cpan.scm: Remove dependency on (gnu packages perl).
(perl-package): New procedure.
(%corelist, core-module?): Use it instead of referring to 'perl'.
2017-10-10 23:12:04 +02:00
Ludovic Courtès
b719ddbbbb
import: pypi: Remove unneeded import.
* guix/import/pypi.scm: Remove unneeded import.
2017-10-10 23:12:03 +02:00
Ludovic Courtès
a6e22d8445
ui: Improve reporting of missing closing parentheses.
Suggested by Ricardo Wurmus.
Works around <https://bugs.gnu.org/28295>.

* guix/ui.scm (report-load-error): Add case for 'read-error'.
* tests/guix-system.sh: Test missing-closing-paren errors.
2017-10-10 23:12:03 +02:00
Troy Sankey
3f81ca324b
gnu: alot: Update to 0.5.1.
* gnu/packages/mail.scm (alot): Update to 0.5.1.
[arguments]: Enable tests.
[native-inputs]: Add python2-mock.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-10 23:09:41 +02:00
Troy Sankey
c1578ad063
gnu: python-twisted: Update to 17.1.0.
* gnu/packages/python.scm (python-twisted): Update to 17.1.0.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-10 23:09:41 +02:00
Troy Sankey
0cd83b4e00
gnu: Add python-incremental.
* gnu/packages/python.scm (python-incremental, python2-incremental): New
variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-10 23:09:41 +02:00
Troy Sankey
96cb5ca1f2
gnu: Add python-automat.
* gnu/packages/python.scm (python-automat, python2-automat): New variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-10 23:09:41 +02:00
Ricardo Wurmus
6414410d7a
gnu: Add python-graphviz.
* gnu/packages/graphviz.scm (python-graphviz, python2-graphviz): New
variables.
2017-10-10 23:09:40 +02:00
Troy Sankey
fd8ff99aa7
gnu: Add python-m2r.
* gnu/packages/python.scm (python-m2r, python2-m2r): New variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-10 23:09:40 +02:00
Troy Sankey
9074bac139
gnu: Add python-constantly.
* gnu/packages/python.scm (python-constantly, python2-constantly): New
variables.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-10 23:09:40 +02:00
Troy Sankey
bb3b4b4ee9
gnu: Add python-attrs.
* gnu/packages/python.scm (python-attrs, python2-attrs): New variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-10-10 23:09:40 +02:00
Julien Lepiller
4b8b4418e6
services: vpn: Fix default tls-auth configuration.
* gnu/services/vpn.scm (serialize-tls-auth): Fix serialization error when
tls-auth is disabled.
2017-10-10 22:06:08 +02:00
Julien Lepiller
262a4d335a
gnu: Add java-fasterxml-jackson-dataformat-xml.
* gnu/packages/java.scm (java-fasterxml-jackson-dataformat-xml): New
variable.
2017-10-10 22:05:59 +02:00
Julien Lepiller
40f193f316
gnu: Add java-woodstox-core.
* gnu/packages/java.scm (java-woodstox-core): New variable.
2017-10-10 22:05:57 +02:00
Julien Lepiller
6fd07b98b1
gnu: Add java-stax2-api.
* gnu/packages/java.scm (java-stax2-api): New variable.
2017-10-10 22:05:55 +02:00
Julien Lepiller
087c8fd2c0
gnu: Add java-fasterxml-jackson-dataformat-yaml.
* gnu/packages/java.scm (java-fasterxml-jackson-dataformat-yaml): New
variable.
2017-10-10 22:05:52 +02:00
Julien Lepiller
0f296d3747
gnu: Add java-snakeyaml.
* gnu/packages/java.scm (java-snakeyaml): New variable.
2017-10-10 22:05:50 +02:00
Julien Lepiller
d57d8b89bb
gnu: Add java-fasterxml-jackson-modules-base-jaxb.
* gnu/packages/java.scm (java-fasterxml-jackson-modules-base-jaxb): New
variable.
2017-10-10 22:05:45 +02:00
Julien Lepiller
f234c7a065
gnu: Add java-fasterxml-jackson-databind.
* gnu/packages/java.scm (java-fasterxml-jackson-databind): New variable.
2017-10-10 22:05:43 +02:00
Julien Lepiller
0b5481dfd3
gnu: Add java-fasterxml-jackson-core.
* gnu/packages/java.scm (java-fasterxml-jackson-core): New variable.
2017-10-10 22:05:40 +02:00
Julien Lepiller
cb05f60d4a
gnu: Add java-fasterxml-jackson-annotations.
* gnu/packages/java.scm (java-fasterxml-jackson-annotations): New
variable.
2017-10-10 22:05:34 +02:00
Julien Lepiller
4496d77fb4
gnu: Add java-ops4j-pax-exam-core-junit.
* gnu/packages/java.scm (java-ops4j-pax-exam-core-junit): New variable.
2017-10-10 22:05:31 +02:00
Julien Lepiller
7a7c2b7556
gnu: Add java-ops4j-pax-exam-core-spi.
* gnu/packages/java.scm (java-ops4j-pax-exam-core-spi): New variable.
2017-10-10 22:05:29 +02:00
Julien Lepiller
e179add07b
gnu: Add java-ops4j-pax-exam-core.
* gnu/packages/java.scm (java-ops4j-pax-exam-core): New variable.
2017-10-10 22:05:26 +02:00