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Author SHA1 Message Date
Leo Prikler a923127d30
gnu: Remove font-ubuntu. 
The Ubuntu Font License has not been approved by the FSF and is considered
non-free by Debian and Fedora, see <https://bugs.gnu.org/48802>.

* gnu/packages/fonts.scm (font-ubuntu): Removed variable.
 2021-06-03 08:29:04 +02:00
Pierre Neidhardt 80a6de6b3a
gnu: Add legit. 
* gnu/packages/lisp-xyz.scm (cl-legit, ecl-legit, sbcl-legit): New variables.
 2021-06-03 08:23:28 +02:00
Pierre Neidhardt 929b72dd58
gnu: Add simple-inferiors. 
* gnu/packages/lisp-xyz.scm (cl-simple-inferiors, ecl-simple-inferiors,
sbcl-simple-inferiors): New variables.
 2021-06-03 08:23:28 +02:00
Leo Famulari 9e7d93f675
gnu: curl: Update to 7.77.0 [fixes CVE-2021-{22897,22898,22901}]. 
* gnu/packages/curl.scm (curl/fixed): Replace with ...
(curl-7.77.0): ... new variable.
(curl)[replacement]: Use curl-7.77.0.
 2021-06-02 23:13:16 -04:00
Marius Bakke 6d71f6a73c
gnu: expat: Replace with 2.4.1 [fixes CVE-2013-0340]. 
* gnu/packages/xml.scm (expat-2.4.1): New variable.
(expat)[replacement]: New field.

Co-authored-by: Leo Famulari <leo@famulari.name>
 2021-06-02 17:07:15 -04:00
Xinglu Chen f32e6e1e2c
gnu: Add emacs-org-pandoc-import. 
* gnu/packages/emacs-xyz.scm (emacs-org-pandoc-import): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-02 21:51:06 +02:00
Diego Nicola Barbato 5be7870a8d
gnu: pioneer: Build with model files. 
Fixes <https://bugs.gnu.org/48686>.

* gnu/packages/games.scm (pioneer)[arguments]: Add make-flags for building
with model files.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-02 21:38:32 +02:00
Ricardo Wurmus b851f38a2f
gnu: r-robustbase: Update to 0.93-8. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.93-8.
 2021-06-02 17:27:10 +02:00
Ricardo Wurmus 02efdd3abf
gnu: r-deoptimr: Update to 1.0-9. 
* gnu/packages/statistics.scm (r-deoptimr): Update to 1.0-9.
 2021-06-02 17:27:10 +02:00
Ricardo Wurmus 08de5b0689
gnu: r-beeswarm: Update to 0.4.0. 
* gnu/packages/statistics.scm (r-beeswarm): Update to 0.4.0.
 2021-06-02 17:27:10 +02:00
Ricardo Wurmus c6be262b78
gnu: r-fastcluster: Update to 1.2.3. 
* gnu/packages/statistics.scm (r-fastcluster): Update to 1.2.3.
 2021-06-02 17:27:10 +02:00
Ricardo Wurmus 350489b331
gnu: r-matrixstats: Update to 0.59.0. 
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.59.0.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus 3319e97c40
gnu: r-e1071: Update to 1.7-7. 
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-7.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus a3268eb598
gnu: r-rcpparmadillo: Update to 0.10.5.0.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.10.5.0.0.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus a8313bfbae
gnu: r-rversions: Update to 2.1.1. 
* gnu/packages/statistics.scm (r-rversions): Update to 2.1.1.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus 80f2d363b8
gnu: r-formatr: Update to 1.11. 
* gnu/packages/statistics.scm (r-formatr): Update to 1.11.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus 61d7869e89
gnu: r-mgcv: Update to 1.8-36. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-36.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus fdc6bfa2aa
gnu: r-matrix: Update to 1.3-4. 
* gnu/packages/statistics.scm (r-matrix): Update to 1.3-4.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus 72e8eabc3a
gnu: r-textshape: Update to 1.7.3. 
* gnu/packages/cran.scm (r-textshape): Update to 1.7.3.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus 0af6a92695
gnu: r-calculus: Update to 0.3.1. 
* gnu/packages/cran.scm (r-calculus): Update to 0.3.1.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus 9b9bb2b732
gnu: r-seurat: Update to 4.0.2. 
* gnu/packages/cran.scm (r-seurat): Update to 4.0.2.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus d9d8a1cdc0
gnu: r-parsnip: Update to 0.1.6. 
* gnu/packages/cran.scm (r-parsnip): Update to 0.1.6.
[propagated-inputs]: Add r-lifecycle.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus f6ae19fedc
gnu: r-clusterr: Update to 1.2.5. 
* gnu/packages/cran.scm (r-clusterr): Update to 1.2.5.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus 17bd981986
gnu: r-rsconnect: Update to 0.8.18. 
* gnu/packages/cran.scm (r-rsconnect): Update to 0.8.18.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus 318808dcdd
gnu: r-forecast: Update to 8.15. 
* gnu/packages/cran.scm (r-forecast): Update to 8.15.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus 317267c460
gnu: r-archivist: Update to 2.3.6. 
* gnu/packages/cran.scm (r-archivist): Update to 2.3.6.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus b3aad04bed
gnu: r-biclust: Update to 2.0.3. 
* gnu/packages/cran.scm (r-biclust): Update to 2.0.3.
 2021-06-02 17:27:09 +02:00
Ricardo Wurmus 83fa31438d
gnu: r-actuar: Update to 3.1-4. 
* gnu/packages/cran.scm (r-actuar): Update to 3.1-4.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 184b3c500c
gnu: r-gdina: Update to 2.8.7. 
* gnu/packages/cran.scm (r-gdina): Update to 2.8.7.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 47cdb9c9a8
gnu: r-parameters: Update to 0.14.0. 
* gnu/packages/cran.scm (r-parameters): Update to 0.14.0.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 8998ed1d8e
gnu: r-leiden: Update to 0.3.8. 
* gnu/packages/cran.scm (r-leiden): Update to 0.3.8.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 81bb987e7e
gnu: r-plot3d: Update to 1.4. 
* gnu/packages/cran.scm (r-plot3d): Update to 1.4.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 509eea0f5d
gnu: r-dalex: Update to 2.2.1. 
* gnu/packages/cran.scm (r-dalex): Update to 2.2.1.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 37fc760ef1
gnu: r-spdep: Update to 1.1-8. 
* gnu/packages/cran.scm (r-spdep): Update to 1.1-8.
[source]: Remove generated files, including Rmarkdown files whose outputs
conflict with the main Rmarkdown file.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 0a6526ebfd
gnu: r-tidytree: Update to 0.3.4. 
* gnu/packages/cran.scm (r-tidytree): Update to 0.3.4.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus ee285cb4ce
gnu: r-ks: Update to 1.13.1. 
* gnu/packages/cran.scm (r-ks): Update to 1.13.1.
[propagated-inputs]: Add r-pracma.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus caeed0e512
gnu: r-weights: Update to 1.0.2. 
* gnu/packages/cran.scm (r-weights): Update to 1.0.2.
[propagated-inputs]: Add r-lme4.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus eb991f3168
gnu: r-mvabund: Update to 4.1.12. 
* gnu/packages/cran.scm (r-mvabund): Update to 4.1.12.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus a9ecb3cf20
gnu: r-sjplot: Update to 2.8.8. 
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.8.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 0bc5c20756
gnu: r-effectsize: Update to 0.4.5. 
* gnu/packages/cran.scm (r-effectsize): Update to 0.4.5.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 3a5b90d0ab
gnu: r-bayestestr: Update to 0.10.0. 
* gnu/packages/cran.scm (r-bayestestr): Update to 0.10.0.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 0d813e0275
gnu: r-emmeans: Update to 1.6.1. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.6.1.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 304d9c5dd3
gnu: r-manipulatewidget: Update to 0.11.0. 
* gnu/packages/cran.scm (r-manipulatewidget): Update to 0.11.0.
[propagated-inputs]: Add r-shinyjs.
[native-inputs]: Add r-knitr.
 2021-06-02 17:27:08 +02:00
Ricardo Wurmus 8b459409a9
gnu: r-insight: Update to 0.14.1. 
* gnu/packages/cran.scm (r-insight): Update to 0.14.1.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus 6c5543d1d7
gnu: r-rdpack: Update to 2.1.2. 
* gnu/packages/cran.scm (r-rdpack): Update to 2.1.2.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus 27bff67ea9
gnu: r-fansi: Update to 0.5.0. 
* gnu/packages/cran.scm (r-fansi): Update to 0.5.0.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus e6068fe401
gnu: r-zip: Update to 2.2.0. 
* gnu/packages/cran.scm (r-zip): Update to 2.2.0.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus ec1666550d
gnu: r-signal: Update to 0.7-7. 
* gnu/packages/cran.scm (r-signal): Update to 0.7-7.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus c4ca93cec9
gnu: r-tinytex: Update to 0.32. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.32.
 2021-06-02 17:27:07 +02:00
Ricardo Wurmus 52eaf9d864
gnu: r-fitdistrplus: Update to 1.1-5. 
* gnu/packages/cran.scm (r-fitdistrplus): Update to 1.1-5.
 2021-06-02 17:27:07 +02:00