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Author SHA1 Message Date
Guillaume Le Vaillant a00e1ee310
gnu: txr: Update to 289. 
* gnu/packages/lisp.scm (txr): Update to 289.
 2023-07-05 15:05:40 +02:00
Guillaume Le Vaillant 5ee2546f14
gnu: q5go: Update to 2.1.3. 
* gnu/packages/games.scm (q5go): Update to 2.1.3.
  [native-inputs]: Add autoconf and automake.
  [arguments]: Delete 'fix-header' phase. 'Update 'fix-configure-script',
  'fix-paths' and 'install-desktop-file' phases.
 2023-07-05 15:02:12 +02:00
Efraim Flashner b1ca5e50a4
gnu: kio: Skip another test. 
* gnu/packages/kde-frameworks.scm (kio)[arguments]: Adjust custom 'check
phase to skip a test which fails on aarch64-linux.
 2023-07-05 09:53:45 +03:00
Efraim Flashner 63f8aab69c
gnu: vim-full: Remove expat linker workaround. 
Python has correctly linked with expat for several years now.

* gnu/packages/vim.scm (vim-full)[arguments]: Remove make-flags.
 2023-07-05 09:53:11 +03:00
Efraim Flashner 52efe95ac4
gnu: vim: Update to 9.0.1672. 
* gnu/packages/vim.scm (vim): Update to 9.0.1672.
[arguments]: Adjust custom 'skip-or-fix-failing-tests to skip another
test.
 2023-07-05 09:53:11 +03:00
Vagrant Cascadian 9122736455
gnu: opensbi: Update to 1.3. 
* gnu/packages/firmware.scm (opensbi): Update to 1.3.
 2023-07-04 14:39:51 -07:00
Mark H Weaver 27976d1bff
gnu: icecat: Update to 102.13.0-guix0-preview1 [security fixes]. 
Includes fixes for CVE-2023-37201, CVE-2023-37202, CVE-2023-37207,
CVE-2023-37208, and CVE-2023-37211.

* gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
 2023-07-04 16:42:17 -04:00
Leo Famulari 3b630604d1
gnu: linux-libre 6.1: Update to 6.1.37. 
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.37.
(linux-libre-6.1-pristine-source): Update hash.
 2023-07-04 12:30:05 -04:00
Leo Famulari 886edb8e1b
gnu: linux-libre: Update to 6.3.11. 
* gnu/packages/linux.scm (linux-libre-6.3-version): Update to 6.3.11.
(linux-libre-6.3-pristine-source): Update hash.
 2023-07-04 12:30:05 -04:00
John Kehayias ce4f4c23a5
gnu: darktable: Update to 4.4.1. 
* gnu/packages/photo.scm (darktable): Update to 4.4.1.
[phases]{fix-missing-include}: Remove phase as this has been fixed upstream.
 2023-07-04 11:27:47 -04:00
Efraim Flashner 1011100868
gnu: local: Register missing patch. 
* gnu/local.mk (dist_patch_DATA): Register missing patch.
 2023-07-04 12:13:48 +03:00
Roman Scherer ec2b5784ab
gnu: Add cl-postgres+local-time. 
The local-time extension for cl-postgres has to be put in a separate package
to solve a dependency cycle between local-time and postmodern.

* gnu/packages/lisp-xyz.scm (sbcl-local-time)[arguments]: Add
  'delete-local-time' phase.
  (sbcl-cl-postgres+local-time): New variable.

Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
 2023-07-04 10:40:27 +02:00
Guillaume Le Vaillant 9a3cd4a969
gnu: p2pool: Update to 3.5. 
* gnu/packages/finance.scm (p2pool): Update to 3.5.
 2023-07-04 10:07:58 +02:00
Ahmad Draidi 09d31e3b09
gnu: xmrig: Update to 6.20.0. 
* gnu/packages/finance.scm (xmrig): Update to 6.20.0.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2023-07-04 09:46:37 +02:00
Navid Afkhami cf7e0267ad
gnu: Add python-cesium. 
* gnu/packages/python-xyz.scm (python-cesium): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2023-07-03 17:57:53 +02:00
Navid Afkhami 07f083e94f
gnu: Add python-gatspy. 
* gnu/packages/bioinformatics.scm (python-gatspy): New variable.
 2023-07-03 17:45:48 +02:00
Ricardo Wurmus f821c06b67
gnu: Add python-astroml. 
* gnu/packages/astronomy.scm (python-astroml): New variable.
 2023-07-03 17:45:48 +02:00
Ricardo Wurmus c66e5ef5f9
gnu: cutadapt: Update to 4.0. 
* gnu/packages/bioinformatics.scm (cutadapt): Update to 4.0.
[build-system]: Use pyproject-build-system.
[arguments]: Disable a single test; remove 'always-cythonize build phase; add
phase 'fix-test.
[native-inputs]: Add python-pytest-mock and python-pytest-timeout.
 2023-07-03 16:37:45 +02:00
Ricardo Wurmus cb15c60d35
gnu: python-dnaio: Update to 0.10.0. 
* gnu/packages/bioinformatics.scm (python-dnaio): Update to 0.10.0.
[arguments]: Disable tests, because they don't exist.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-setuptools-scm; move python-xopen from here...
[propagated-inputs]: ...to here.
 2023-07-03 16:36:53 +02:00
Ricardo Wurmus 1b956b17b2
gnu: python-xopen: Update to 1.7.0. 
* gnu/packages/python-xyz.scm (python-xopen): Update to 1.7.0.
[build-system]: Use pyproject-build-system.
[propagated-inputs]: Add pigz, python-isal, and python-typing-extensions; move
python-setuptools-scm from here...
[native-inputs]: ...to here; add python-pytest and python-pytest-timeout.
[description]: Reflow.
 2023-07-03 16:35:48 +02:00
Ricardo Wurmus d56a6fa9b2
gnu: python-isal: Update to 1.1.0. 
* gnu/packages/python-compression.scm (python-isal): Update to 1.1.0.
[build-system]: Use pyproject-build-system.
 2023-07-03 16:07:54 +02:00
Navid Afkhami 669f0eaed6
gnu: Add r-dtmm. 
* gnu/packages/bioinformatics.scm (r-dtmm): New variable.
 2023-07-03 13:42:47 +02:00
Navid Afkhami 29ccd7cac9
gnu: Add r-fsa. 
* gnu/packages/cran.scm (r-fsa): New variable.
 2023-07-03 10:00:16 +02:00
Navid Afkhami 9dda8cdde5
gnu: Add r-dicekriging. 
* gnu/packages/cran.scm (r-dicekriging): New variable.
 2023-07-03 09:59:55 +02:00
Navid Afkhami 11651fbf7f
gnu: Add r-cellid. 
* gnu/packages/bioconductor.scm (r-cellid): New variable.
 2023-07-03 09:58:57 +02:00
Navid Afkhami 6398fa7860
gnu: Add r-dunn-test. 
* gnu/packages/cran.scm (r-dunn-test): New variable.
 2023-07-03 09:57:56 +02:00
Navid Afkhami 896c872306
gnu: Add r-ggfittext. 
* gnu/packages/cran.scm (r-ggfittext): New variable.
 2023-07-03 09:57:15 +02:00
Navid Afkhami 4ef4de633c
gnu: Add r-tidyft. 
* gnu/packages/cran.scm (r-tidyft): New variable.
 2023-07-03 09:57:15 +02:00
Navid Afkhami cd7900c71f
gnu: Add r-emoa. 
* gnu/packages/cran.scm (r-emoa): New variable.
 2023-07-03 09:56:41 +02:00
Navid Afkhami aae5f41b36
gnu: Add r-mlrmbo. 
* gnu/packages/cran.scm (r-mlrmbo): New variable.
 2023-07-03 09:56:14 +02:00
Navid Afkhami 3f055028ac
gnu: Add r-mlr. 
* gnu/packages/cran.scm (r-mlr): New variable.
 2023-07-03 09:47:15 +02:00
Navid Afkhami 155e3f2e87
gnu: Add r-parallelmap. 
* gnu/packages/cran.scm (r-parallelmap): New variable.
 2023-07-03 09:45:16 +02:00
Navid Afkhami 143ecd555a
gnu: Add r-smoof. 
* gnu/packages/cran.scm (r-smoof): New variable.
 2023-07-03 09:44:15 +02:00
Navid Afkhami 828f75ce75
gnu: Add r-paramhelpers. 
* gnu/packages/cran.scm (r-paramhelpers): New variable.
 2023-07-03 09:43:43 +02:00
Ricardo Wurmus eb55223e28
gnu: r-v8: Update to 4.3.1. 
* gnu/packages/cran.scm (r-v8): Update to 4.3.1.
[properties]: Let updater ignore libnode.
 2023-07-03 09:36:31 +02:00
Danny Milosavljevic 08649cfcd4
gnu: jbr: Make big cursors work. 
* gnu/packages/patches/jbr-17-xcursor-no-dynamic.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/java.scm (jbr17)[source]<#:patches>: Add it.
 2023-07-03 03:09:30 +02:00
Danny Milosavljevic 6cdab8fd09
gnu: Add jbr. 
* gnu/packages/java.scm (jbr17): New variable.
 2023-07-03 00:01:29 +02:00
Hartmut Goebel 246445b20d
gnu: nextcloud-client: Update to 3.8.2. 
* gnu/packages/sync.scm (nextcloud-client): Update to 3.8.2.
[snippets]: Keep 3rd-party files from kirigami. Remove more references of
deleted 3rd parties.  Adjust substitute for new code.
[configure-flags]: Disable building the updater.
[phases]<patch-cmake>: Adjust substitute for new code.
<check>: Use custom phase to disable a failing test.
[inputs]: Add dbus and karchive.
[native-inputs]: Add librsvg-for-system.
 2023-07-02 20:40:59 +02:00
Hartmut Goebel 1d471bbe44
gnu: podman: Fix path to helper binaries. 
'quadlet' and 'rootlessport' coming with podman reside in
"#$output/libexex/podman", not in "#$output/bin".  Thus search this
first.

* gnu/packages/containers.scm (podman)[phases]<fix-hardcoded-paths>:
  Change subsitution for "/usr/local/libexec/podman", add substitution
  for "/usr/local/lib/podman".
 2023-07-02 20:27:22 +02:00
Cory Fields 39a3251feb
gnu: llvm: make clang-make-toolchain public 
Matches gcc-make-toolchain. Allow for llvm build to be patched.

* gnu/packages/llvm.scm: make clang-make-toolchain public

Signed-off-by: Carl Dong <contact@carldong.me>
 2023-07-02 13:12:02 -04:00
Vagrant Cascadian a919a16898
gnu: python-pyelftools: Update to 0.29. 
* gnu/packages/python-xyz.scm (python-pyelftools): Update to 0.29.
 2023-07-01 18:57:33 -07:00
Nicolas Graves c4a836f65d
gnu: Add python-tree-sitter. 
* gnu/packages/tree-sitter.scm (python-tree-sitter): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Reviewed-by: Jean-Pierre De Jesus DIAZ <jean@foundationdevices.com>
 2023-07-01 23:38:27 +02:00
Hilton Chain 5da45e54c5
gnu: Add miniflux. 
* gnu/packages/web.scm (miniflux): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-07-01 23:38:27 +02:00
Hilton Chain 74adc15787
gnu: Add go-github-com-rylans-getlang. 
* gnu/packages/golang.scm (go-github-com-rylans-getlang): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-07-01 23:38:27 +02:00
Hilton Chain 8e755ae077
gnu: Add go-github-com-matrix-org-gomatrix. 
* gnu/packages/golang.scm (go-github-com-matrix-org-gomatrix): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-07-01 23:38:27 +02:00
Hilton Chain 7c9265c46f
gnu: Add go-github-com-go-telegram-bot-api-telegram-bot-api. 
* gnu/packages/golang.scm (go-github-com-go-telegram-bot-api-telegram-bot-api): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-07-01 23:38:27 +02:00
Hilton Chain ae93b542b2
gnu: Add go-github-com-technoweenie-multipartstreamer. 
* gnu/packages/golang.scm (go-github-com-technoweenie-multipartstreamer): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-07-01 23:38:27 +02:00
Hilton Chain 71a2821105
gnu: Add go-github-com-tdewolff-minify-v2. 
* gnu/packages/golang.scm (go-github-com-tdewolff-minify-v2): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-07-01 23:38:27 +02:00
Hilton Chain ac481a0050
gnu: Add go-github-com-tdewolff-parse-v2. 
* gnu/packages/golang.scm (go-github-com-tdewolff-parse-v2): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-07-01 23:38:27 +02:00
Hilton Chain b7708699d9
gnu: Add go-github-com-tdewolff-test. 
* gnu/packages/golang.scm (go-github-com-tdewolff-test): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-07-01 23:38:26 +02:00