Maxim Cournoyer
9e9204958d
gnu: Add ts4900-utils.
...
* gnu/packages/embedded.scm (ts4900-utils): New variable.
2022-12-03 00:06:13 -05:00
Maxim Cournoyer
b75559179e
services: configuration: Rename location accessor to "source-location".
...
Fixes <https://issues.guix.gnu.org/59423 >.
* gnu/services/configuration.scm (define-configuration-helper): Rename the
accessor of the %location field from "NAME-location" to
"NAME-source-location".
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Reported-by: Pierre Langlois <pierre.langlois@gmx.com>
2022-12-02 22:02:48 -05:00
Zhu Zihao
79a3cd34c0
gnu: loko-scheme: Update to 0.12.0.
...
* gnu/packages/loko.scm (loko-scheme): Update to 0.12.0.
[arguments]<#:make-flags>: No need to specify GDB scripts directory.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-12-02 23:11:10 +01:00
Zhu Zihao
1f5241d8d5
gnu: loko-scheme: Use G-expressions.
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* gnu/packages/loko.scm (loko-scheme)[arguments]: Use G-expressions.
<#:phases>: In 'akku-fixes', replace "(assoc-ref inputs name)" with
"this-package-native-input".
[native-inputs]: Use label-less style.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-12-02 23:11:10 +01:00
Ludovic Courtès
9672db290a
modules: Recognize #:declarative?.
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This addition has become necessary since commit
54003af85c
, which makes use
of #:declarative? in modules produced by 'make-config.scm'.
Reported by zimoun <zimon.toutoune@gmail.com>.
* guix/modules.scm (extract-dependencies): Recognize #:declarative?,
which was introduced in Guile 3.0.8.
2022-12-02 23:11:09 +01:00
Ontje Lünsdorf
9b016e2991
gnu: python-protobuf: Use C++ implementation.
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* gnu/packages/protobuf.scm (python-protobuf): Use C++ implementation.
[inputs]: Add protobuf.
[arguments]: Add --cpp_implementation configure flags.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-12-02 23:11:09 +01:00
Marius Bakke
51d6bd3507
gnu: Add rust-k9.
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* gnu/packages/crates-io.scm (rust-k9-0.11): New variable.
2022-12-02 22:21:42 +01:00
Marius Bakke
3c5cbd3c9d
gnu: rust-digest: Update to 0.10.6.
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* gnu/packages/crates-io.scm (rust-digest-0.10): Update to 0.10.6.
2022-12-02 22:21:42 +01:00
Marius Bakke
2066ae53f1
gnu: QtWebEngine: Use more system libraries.
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* gnu/packages/qt.scm (qtwebengine)[source](snippet): Remove more files.
[arguments]: Pass QT_FEATURES_system_foo for all supported libraries.
[inputs]: Replace "harfbuzz" with HARFBUZZ-5.
2022-12-02 22:21:42 +01:00
Ricardo Wurmus
fd44d489b5
gnu: python-biom-format: Update to 2.1.12.
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* gnu/packages/bioinformatics.scm (python-biom-format): Update to 2.1.12.
[arguments]: Remove "relax" phase; update "disable-broken-tests" phase.
[propagated-inputs]: Add python-scikit-bio.
2022-12-02 21:46:36 +01:00
Ricardo Wurmus
b93e21a213
gnu: Add python-scikit-bio.
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* gnu/packages/bioinformatics.scm (python-scikit-bio): New variable.
2022-12-02 21:46:36 +01:00
Ricardo Wurmus
b2a9feab92
gnu: Add python-hdmedians.
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* gnu/packages/statistics.scm (python-hdmedians): New variable.
2022-12-02 21:46:36 +01:00
Ricardo Wurmus
62da3f9837
gnu: python-pairtools: Update to 1.0.2.
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* gnu/packages/bioinformatics.scm (python-pairtools): Update to 1.0.2.
[source]: Update Github URL.
[arguments]: Update patch in "fix-references" phase.
[native-inputs]: Remove python-nose.
[inputs]: Remove.
[propagated-inputs]: Add python-bioframe, python-pandas, python-pysam,
python-pyyaml, and python-scipy.
[home-page]: Update.
2022-12-02 21:46:36 +01:00
Ricardo Wurmus
089b2e4f65
gnu: python-pairtools: Run tests conditionally.
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* gnu/packages/bioinformatics.scm (python-pairtools)[arguments]: Run tests
conditionally.
2022-12-02 21:46:36 +01:00
Ricardo Wurmus
631ea9a411
gnu: python-pybedtools: Use pyproject-build-system.
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* gnu/packages/bioinformatics.scm (python-pybedtools)[build-system]: Use
pyproject-build-system.
[arguments]: Import (guix build pyproject-build-system).
2022-12-02 21:46:36 +01:00
Ricardo Wurmus
a268b1ba91
gnu: python-htsget: Update to 0.2.6.
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* gnu/packages/bioinformatics.scm (python-htsget): Update to 0.2.6.
[build-system]: Use pyproject-build-system.
2022-12-02 21:46:35 +01:00
Ricardo Wurmus
16ecce39d2
gnu: python-cellbender: Update to 0.2.2.
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* gnu/packages/bioinformatics.scm (python-cellbender): Update to 0.2.2.
[build-system]: Use pyproject-build-system.
2022-12-02 21:46:35 +01:00
Felix Lechner
9ef6286bc3
gnu: Add bgpq3.
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* gnu/packages/networking.scm (bgpq3): New variable.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2022-11-27 01:00:00 +01:00
Marius Bakke
83350bf56b
gnu: rust-zerocopy: Add 0.6.1.
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* gnu/packages/crates-io.scm (rust-zerocopy-0.6): New variable.
(rust-zerocopy-0.3): Inherit from it.
2022-12-02 19:35:46 +01:00
Marius Bakke
d65afc9f5a
gnu: rust-zerocopy-derive: Add 0.3.2.
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* gnu/packages/crates-io.scm (rust-zerocopy-derive-0.3): New variable.
(rust-zerocopy-derive-0.2): Inherit from it.
2022-12-02 19:35:46 +01:00
Marius Bakke
3c8bd23d0a
gnu: Add rust-sha1-smol.
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* gnu/packages/crates-io.scm (rust-sha1-smol-1): New variable.
2022-12-02 19:35:46 +01:00
Marius Bakke
ddb87e8acc
gnu: rust-md-5: Add 0.10.5.
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* gnu/packages/crates-io.scm (rust-md-5-0.10): New variable.
(rust-md-5-0.9): Inherit from it.
2022-12-02 19:35:45 +01:00
Marius Bakke
3492a01928
gnu: rust-md5-asm: Update to 0.5.0.
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* gnu/packages/crates-io.scm (rust-md5-asm-0.5): New variable.
(rust-md5-asm-0.4): Inherit from it.
2022-12-02 19:35:45 +01:00
Marius Bakke
3d90b39d9e
gnu: Add rust-atomic.
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* gnu/packages/crates-io.scm (rust-atomic-0.5): New variable.
2022-12-02 19:35:45 +01:00
Marius Bakke
26582405c3
gnu: rust-memoffset: Add 0.7.1.
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* gnu/packages/crates-io.scm (rust-memoffset-0.7): New variable.
(rust-memoffset-0.6): Inherit from it.
2022-12-02 19:35:45 +01:00
Marius Bakke
5e8f23a7fd
gnu: rust-gl: Add 0.14.
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* gnu/packages/crates-graphics.scm (rust-gl-0.14): New variable.
(rust-gl-0.11): Inherit.
2022-12-02 19:35:45 +01:00
Marius Bakke
365b0b5533
gnu: ungoogled-chromium: Use git tag in ungoogled origin.
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* gnu/packages/chromium.scm (%ungoogled-origin)[uri]: Use %UNGOOGLED-REVISION
instead of commit identifier.
2022-12-02 19:10:51 +01:00
Marius Bakke
11b0670a9d
gnu: kicad: Remove obsolete phases.
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* gnu/packages/engineering.scm (kicad)[arguments]: Remove two phases.
2022-12-02 19:08:27 +01:00
Marius Bakke
ea0e6e5d65
gnu: golly: Update to 4.2.
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* gnu/packages/games.scm (golly): Update to 4.2.
[arguments]: Remove configure phase.
[inputs]: Remove PYTHON-2 and WXWIDGETS-GTK2. Add PYTHON, SDL2, and
WXWIDGETS. Remove labels while at it.
2022-12-02 19:08:27 +01:00
Marius Bakke
6aac95ae2b
gnu: python-wxpython: Update to 4.2.0.
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* gnu/packages/wxwidgets.scm (python-wxpython): Update to 4.2.0.
[propagated-inputs]: Add PYTHON-ATTRDICT.
2022-12-02 19:08:27 +01:00
Marius Bakke
f16358144f
gnu: wxWidgets: Update to 3.2.1.
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* gnu/packages/wxwidgets.scm (wxwidgets): Update to 3.2.1.
[source](modules, snippet): New fields.
[inputs]: Remove SDL. Add CATCH-FRAMEWORK, EXPAT, GSTREAMER,
GST-PLUGINS-BASE, LIBNOTIFY, LIBPNG, LIBSECRET, PCRE, SDL2,
WEBKITGTK-WITH-LIBSOUP2, and ZLIB
[arguments]: Add "--enable-mediactrl" and "--enable-gui" to #:configure-flags.
Remove aarch64 workaround. Install catch header in refer-to-inputs phase.
Add phase to adjust WebKitGTK version.
(wxwidgets-3.1, wxwidgets-gtk2-3.1): Remove variables.
(wxwidgets-3.0, (wxwidgets-gtk2-3.0): New variables.
(wxsvg)[inputs]: Change from WXWIDGETS-3.1 to WXWIDGETS.
* gnu/packages/audio.scm (audacity)[inputs]: Likewise.
* gnu/packages/cdrom.scm (dvdstyler)[inputs]: Likewise.
* gnu/packages/astronomy.scm (imppg)[inputs]: Change from WXWIDGETS to
WXWIDGETS-3.0.
* gnu/packages/ftp.scm (filezilla)[inputs]: Likewise.
* gnu/packages/games.scm (megaglest)[inputs]: Likewise.
* gnu/packages/geo.scm (opencpn)[inputs]: Likewise.
* gnu/packages/music.scm (sooperlooper)[inputs]: Likewise.
* gnu/packages/engineering.scm (kicad)[arguments]: Enable EGL support.
2022-12-02 19:08:27 +01:00
Marius Bakke
8737ee0479
gnu: wxWidgets: Remove input labels.
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* gnu/packages/wxwidgets.scm (wxwidgets)[inputs]: Remove labels.
[arguments]: Use SEARCH-INPUT-FILE.
(wxwidgets-gtk2)[inputs]: Use MODIFY-INPUTS.
2022-12-02 19:08:27 +01:00
Marius Bakke
2cf835ae28
gnu: jucipp: Update to 1.7.2.
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* gnu/packages/text-editors.scm (jucipp): Update to 1.7.2.
[arguments]: Skip one more test.
2022-12-02 19:08:26 +01:00
Marius Bakke
fa3dac025a
gnu: universal-ctags: Update to 5.9.20221127.0.
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* gnu/packages/code.scm (universal-ctags): Update to 5.9.20221127.0.
2022-12-02 19:08:26 +01:00
Ricardo Wurmus
62ddd3bc80
gnu: Add python-fanc.
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* gnu/packages/bioinformatics.scm (python-fanc): New variable.
Co-authored-by: Navid Afkhami <navid.afkhami@mdc-berlin.de>
2022-12-02 17:43:20 +01:00
Ricardo Wurmus
ee069ec651
gnu: Add python-genomic-regions.
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* gnu/packages/bioinformatics.scm (python-genomic-regions): New variable.
Co-authored-by: Navid Afkhami <navid.afkhami@mdc-berlin.de>
2022-12-02 17:20:54 +01:00
Navid Afkhami
9ddc4e5b03
gnu: python-msgpack-numpy: Update to 0.4.8.
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* gnu/packages/python-science.scm (python-msgpack-numpy): Update to 0.4.8.
2022-12-02 15:04:15 +01:00
Ricardo Wurmus
0c2dad9951
gnu: Add python-pybloom-live.
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* gnu/packages/python-xyz.scm (python-pybloom-live): New variable.
2022-12-02 15:03:00 +01:00
Ricardo Wurmus
840d543939
gnu: python-xxhash: Update to 3.1.0.
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* gnu/packages/digest.scm (python-xxhash): Update to 3.1.0.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-setuptools-scm.
2022-12-02 15:03:00 +01:00
Maxim Cournoyer
4781f0458d
Revert "gnu: linux-libre: Move info manual to doc output."
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This reverts commit 748ec62882
. It broke the
linux-libre-module-builder like so:
builder for
`/gnu/store/293jxydym9z7ck7afmrjqhiw3xpfs4i1-linux-libre-module-builder-6.0.10.drv'
failed to produce output path
`/gnu/store/ghmp1q5w6r1s9364rz53jd42152wgz2v-linux-libre-module-builder-6.0.10-doc'
for reasons difficult to understand.
2022-12-01 21:37:12 -05:00
Marius Bakke
2775bb95c7
gnu: ungoogled-chromium: Update to 108.0.5359.71-1.
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* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for M108.
(%chromium-version): Set to 108.0.5359.71-1.
(%arch-revision): Bump to newer commit.
(%ungoogled-origin): Update hash.
(%gcc-patches): Remove.
(%reverse-patches): Remove one patch.
(%arch-patches): New variable.
(%patches): New variable.
(ungoogled-chromium-snippet): Apply %PATCHES instead of individual variables.
(ungoogled-chromium)[source]: Update hash.
[arguments]: Adjust configure flag.
[inputs]: Change from HARFBUZZ-3 to HARFBUZZ-5.
2022-12-02 00:21:25 +01:00
Marius Bakke
503fb0dcb4
gnu: ungoogled-chromium: Generalize OpenJPEG substitution.
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* gnu/packages/chromium.scm (ungoogled-chromium)[arguments]: Don't hard code
openjpeg version.
2022-12-02 00:21:25 +01:00
Marius Bakke
1a8d063a44
gnu: harfbuzz: Add 5.3.1.
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* gnu/packages/gtk.scm (harfbuzz-5): New variable.
2022-12-02 00:21:25 +01:00
Marius Bakke
c091339204
gnu: balsa: Update to 2.6.4.
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* gnu/packages/mail.scm (balsa): Update to 2.6.4.
2022-12-02 00:21:25 +01:00
Marius Bakke
dee7c94b59
gnu: balsa: Add release-monitoring-url.
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* gnu/packages/mail.scm (balsa)[properties]: New field.
2022-12-02 00:21:25 +01:00
Marius Bakke
168afe2976
gnu: svt-av1: Update to 1.3.0.
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* gnu/packages/video.scm (svt-av1): Update to 1.3.0.
[supported-systems]: Remove.
[description]: Update.
2022-12-02 00:21:25 +01:00
Marius Bakke
84c577d7a7
gnu: QtWebEngine: Simplify code to remove third-party files.
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* gnu/packages/qt.scm (remove-third-party-files): Simplify some procedures.
2022-12-02 00:21:25 +01:00
Marius Bakke
9252f14722
gnu: qtwebengine@6: Fix third-party code removal snippet.
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* gnu/packages/qt.scm (qtwebengine-5)[source](snippet): Move code to delete
third-party files out to ...
(remove-third-party-files): ... this new variable.
(qtwebengine)[source](snippet): Use that variable instead of the broken
duplicate implementation. Adjust PRESERVED-THIRD-PARTY-FILES accordingly.
[native-inputs]: Add PYTHON-BEAUTIFULSOUP4.
2022-12-02 00:21:25 +01:00
Marius Bakke
6f0a8371fe
gnu: gn: Use G-expression.
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* gnu/packages/build-tools.scm (gn)[arguments]: Convert to G-expression.
2022-12-02 00:21:24 +01:00
Marius Bakke
e069db7e30
gnu: gn: Remove input labels.
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* gnu/packages/build-tools.scm (gn)[native-inputs]: Remove labels.
2022-12-02 00:21:24 +01:00