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22278 commits

Author SHA1 Message Date
Ricardo Wurmus
9cc823f567
gnu: lilypond: Use texlive-union.
* gnu/packages/music.scm (lilypond)[arguments]: Add phase "use-texlive-union".
[native-inputs]: Replace "texlive" with a texlive-union.
2017-07-09 17:07:38 +02:00
Ricardo Wurmus
e5942cbfa4
doc: Recommend rebuilding the font cache.
* doc/guix.texi (X11 Fonts): Recommend rebuilding the font cache with fc-cache
when fonts are not found.
2017-07-09 17:07:38 +02:00
Ricardo Wurmus
b037ce949f
gnu: lilypond: Update to 2.19.63.
* gnu/packages/music.scm (lilypond): Update to 2.19.63.
2017-07-09 17:07:37 +02:00
Ricardo Wurmus
44436def9b
gnu: Add texlive-metapost.
* gnu/packages/tex.scm (texlive-metapost): New variable.
2017-07-09 17:07:37 +02:00
Ricardo Wurmus
406af0d663
gnu: Add texlive-latex-lh.
* gnu/packages/tex.scm (texlive-latex-lh): New variable.
2017-07-09 17:07:37 +02:00
Ricardo Wurmus
ae3779d5cd
gnu: Add texlive-latex-eepic.
* gnu/packages/tex.scm (texlive-latex-eepic): New variable.
2017-07-09 17:07:37 +02:00
Ricardo Wurmus
1562763c0a
gnu: Add texlive-latex-eso-pic.
* gnu/packages/tex.scm (texlive-latex-eso-pic): New variable.
2017-07-09 17:07:36 +02:00
Ricardo Wurmus
83c830d1ac
gnu: Add texlive-fonts-ec.
* gnu/packages/tex.scm (texlive-fonts-ec): New variable.
2017-07-09 17:07:36 +02:00
Ricardo Wurmus
9186c1560b
gnu: Add texlive-generic-epsf.
* gnu/packages/tex.scm (texlive-generic-epsf): New variable.
2017-07-09 17:07:35 +02:00
Ricardo Wurmus
cd2c77f434
gnu: Add texlive-latex-wasysym.
* gnu/packages/tex.scm (texlive-latex-wasysym): New variable.
2017-07-09 17:07:35 +02:00
Ricardo Wurmus
acc620d6ed
gnu: Add texlive-latex-titlesec.
* gnu/packages/tex.scm (texlive-latex-titlesec): New variable.
2017-07-09 17:07:34 +02:00
Ricardo Wurmus
2db3a03445
gnu: Add texlive-latex-subfigure.
* gnu/packages/tex.scm (texlive-latex-subfigure): New variable.
2017-07-09 17:07:34 +02:00
Ricardo Wurmus
d8fef6ea1f
gnu: Add texlive-fonts-stmaryrd.
* gnu/packages/tex.scm (texlive-fonts-stmaryrd): New variable.
2017-07-09 17:07:34 +02:00
Ricardo Wurmus
adc02c70c2
gnu: Add texlive-latex-pdfpages.
* gnu/packages/tex.scm (texlive-latex-pdfpages): New variable.
2017-07-09 17:07:33 +02:00
Ricardo Wurmus
da38b23595
gnu: Add texlive-latex-overpic.
* gnu/packages/tex.scm (texlive-latex-overpic): New variable.
2017-07-09 17:07:33 +02:00
Ricardo Wurmus
ecffeeb54f
gnu: Add texlive-latex-multirow.
* gnu/packages/tex.scm (texlive-latex-multirow): New variable.
2017-07-09 17:07:32 +02:00
Ricardo Wurmus
02fd07b305
gnu: Add texlive-latex-jknapltx.
* gnu/packages/tex.scm (texlive-latex-jknapltx): New variable.
2017-07-09 17:07:32 +02:00
Ricardo Wurmus
b2bc1daf98
gnu: Add texlive-latex-listings.
* gnu/packages/tex.scm (texlive-latex-listings): New variable.
2017-07-09 17:07:32 +02:00
Ricardo Wurmus
3921bc7c24
gnu: Add texlive-latex-footmisc.
* gnu/packages/tex.scm (texlive-latex-footmisc): New variable.
2017-07-09 17:07:31 +02:00
Ricardo Wurmus
df2b9bb4de
gnu: Add texlive-latex-float.
* gnu/packages/tex.scm (texlive-latex-float): New variable.
2017-07-09 17:07:31 +02:00
Ricardo Wurmus
18ce343773
gnu: Add texlive-latex-fancyvrb.
* gnu/packages/tex.scm (texlive-latex-fancyvrb): New variable.
2017-07-09 17:07:31 +02:00
Ricardo Wurmus
20282111e5
gnu: Add texlive-latex-fancyhdr.
* gnu/packages/tex.scm (texlive-latex-fancyhdr): New variable.
2017-07-09 17:07:30 +02:00
Ricardo Wurmus
36ce05ffdd
gnu: Add texlive-latex-fancybox.
* gnu/packages/tex.scm (texlive-latex-fancybox): New variable.
2017-07-09 17:07:30 +02:00
Ricardo Wurmus
e003a5f06d
gnu: Add texlive-latex-colortbl.
* gnu/packages/tex.scm (texlive-latex-colortbl): New variable.
2017-07-09 17:07:30 +02:00
Ricardo Wurmus
b92ac281e5
gnu: Add texlive-latex-changebar.
* gnu/packages/tex.scm (texlive-latex-changebar): New variable.
2017-07-09 17:07:29 +02:00
Ricardo Wurmus
1d3be84e73
gnu: Add texlive-latex-appendix.
* gnu/packages/tex.scm (texlive-latex-appendix): New variable.
2017-07-09 17:07:29 +02:00
Ricardo Wurmus
bda61541d5
gnu: Add texlive-latex-anysize.
* gnu/packages/tex.scm (texlive-latex-anysize): New variable.
2017-07-09 17:07:29 +02:00
Ricardo Wurmus
137f9cbc88
gnu: Add texlive-latex-amsfonts.
* gnu/packages/tex.scm (texlive-latex-amsfonts): New variable.
2017-07-09 17:07:29 +02:00
Ricardo Wurmus
98b4aca156
gnu: Add texlive-fonts-amsfonts.
* gnu/packages/tex.scm (texlive-fonts-amsfonts): New variable.
2017-07-09 17:07:28 +02:00
Ricardo Wurmus
beb476ed77
gnu: texlive-generic-ifxetex: Fix description.
* gnu/packages/tex.scm (texlive-generic-ifxetex)[description]: Fix typo.
2017-07-09 17:07:28 +02:00
Ricardo Wurmus
05d28068ed
gnu: texlive-latex-oberdiek: Build ifpdf package.
* gnu/packages/tex.scm (texlive-latex-oberdiek)[arguments]: Only build the
"oberdiek.ins" package (which includes all other packages); patch file to
build "ifpdf.dtx" instead of "ifpdf.ins".
2017-07-09 17:07:28 +02:00
Ricardo Wurmus
702f23b3b8
gnu: texlive-latex-base: Fix xetex and xelatex formats.
* gnu/packages/tex.scm (texlive-latex-base)[arguments]: Build xetex and
xelatex formats with matching interpreters.
2017-07-09 17:07:27 +02:00
Ricardo Wurmus
bb3b35975c
build-system: texlive: Build union in configure phase.
This allows us to use texmf.cnf instead of having to set all required
environment variables manually.

* guix/build/texlive-build-system.scm (configure): New procedure.
(build): Simplify.
(%standard-phases): Add configure phase.
* guix/build-system/texlive.scm (texlive-build): Include (guix build union) in
modules.
(%texlive-build-system-modules): Likewise.
2017-07-09 17:07:27 +02:00
Ricardo Wurmus
1678be097b
build-system: texlive: Only build packages in the current directory.
* guix/build/texlive-build-system.scm (build): Use scandir instead of
find-files.
2017-07-09 17:07:27 +02:00
Ricardo Wurmus
fed7200862
gnu: deeptools: Update to 2.5.1.
* gnu/packages/bioinformatics.scm (deeptools): Update to 2.5.1.
[arguments]: Remove.
[native-inputs]: Use "python-" instead of "python2-" variants.
[inputs]: Likewise; add python-py2bit.
2017-07-09 17:07:27 +02:00
Ricardo Wurmus
eb2200f3bd
gnu: Add python-py2bit.
* gnu/packages/bioinformatics.scm (python-py2bit): New variable.
2017-07-09 17:07:23 +02:00
Ricardo Wurmus
bdb31853f0
gnu: Add java-jgit-4.2.
* gnu/packages/version-control.scm (java-jgit-4.2): New variable.
2017-07-09 16:57:05 +02:00
Ricardo Wurmus
2613f5aff0
gnu: Add java-jgit.
* gnu/packages/version-control.scm (java-jgit): New variable.
2017-07-09 16:57:05 +02:00
Ricardo Wurmus
f8e4d0224b
gnu: Add java-slf4j-api.
* gnu/packages/java.scm (java-slf4j-api): New variable.
2017-07-09 16:57:04 +02:00
Ricardo Wurmus
eb270ecfdd
gnu: Add java-javaewah.
* gnu/packages/java.scm (java-javaewah): New variable.
2017-07-09 16:57:04 +02:00
Ricardo Wurmus
218d093b15
gnu: Add java-classpathx-servletapi
* gnu/packages/java.scm (java-classpathx-servletapi): New variable.
2017-07-09 16:57:03 +02:00
Tobias Geerinckx-Rice
efd5a841e5
gnu: youtube-dl: Update to 2017.07.09.
* gnu/packages/video.scm (youtube-dl): Update to 2017.07.09.
2017-07-09 15:58:35 +02:00
Marius Bakke
ed40e7c5eb
gnu: libjpeg-turbo: Update to 1.5.2.
* gnu/packages/image.scm (libjpeg-turbo): Update to 1.5.2.
[arguments]<#:phases>: Remove.
2017-07-09 15:12:53 +02:00
Feng Shu
e2155f58c0
gnu: you-get: Update to 0.4.775.
* gnu/packages/video.scm (you-get): Update to 0.4.775.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-07-09 21:27:37 +10:00
Leo Famulari
b3cc304b30
gnu: poppler: Use an ABI-compatible replacement to fix CVE-2017-9776.
This is a followup to commit 95bbaa02aa.
See <https://bugs.gnu.org/27621> for more information.

Poppler 0.56.0's ABI is not compatible with Poppler 0.52.0, so it's not
possible to graft the newer version in place of the older one.

This change leaves CVE-2017-9775 unfixed for now.

* gnu/packages/patches/poppler-CVE-2017-9776.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (poppler-0.56.0): Replace with ...
(poppler/fixed): ... new variable.
(poppler)[replacement]: Replaced with poppler/fixed.
2017-07-09 02:25:27 -04:00
Tobias Geerinckx-Rice
447f75825f
gnu: sshuttle: Update to 0.78.3.
* gnu/packages/vpn.scm (sshuttle): Update to 0.78.3.
2017-07-09 01:59:25 +02:00
Kei Kebreau
5143517c99
gnu: wxmaxima: Update to 17.05.0.
* gnu/packages/maths.scm (wxmaxima): Update to 17.05.0.
[source]: Update URL and add file-name.
[native-inputs]: Add autoconf, automake and gettext-minimal.
[arguments]: Add 'autoconf' phase.
2017-07-08 17:05:55 -04:00
Efraim Flashner
fac2b430b9
gnu: font-gnu-unifont: Update to 10.0.04.
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.04.
2017-07-08 23:49:29 +03:00
Oleg Pykhalov
dde1e152ce
doc: Add note about private-key during offload.
* doc/guix.texi (Using the Offload Facility): Add note about private-key.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-07-08 18:29:35 +02:00
Ben Woodcroft
4732e6ee84
gnu: blast+: Update to 2.6.0.
* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0.
[origin]: Remove bundled pcre.  Add patch.
[arguments]: Replace paths in run_with_lock.c.  Configure with pcre.
[inputs]: Add pcre, perl, python.
* gnu/packages/patches/blast+-fix-makefile.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-07-08 12:05:59 +10:00