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Author SHA1 Message Date
Christopher Baines 9aa2b74198
doc: contributing: Tweak the Commit Policy. 
Add more examples of when it can be appropriate to push changes without
review, as I think this can be appropriate in the case of trivial changes (as
mentioned before), but also non-trivial fixes.

No longer suggest pushing simple new packages or package upgrades (that don't
cause lots of rebuilds) without sending to guix-patches. Now there's some
automation for testing changes sent to guix-patches, sending changes there
before pushing can mean that more rigorous testing takes place and help speed
up substitutes becoming available. This is true, even if no human review takes
place.

Only suggest waiting one week for review for simpler changes, wait two weeks
for more significant changes.

Also, reorder some of the information in this section so it's grouped together
better.

* doc/contributing.texi (Commit Policy): Tweak.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-01-11 10:31:55 +00:00
Maxim Cournoyer 24ad9a9a48
gnu: Add emacs-enh-ruby-mode. 
* gnu/packages/emacs-xyz.scm (emacs-enh-ruby-mode): New variable.
 2023-01-10 22:06:35 -05:00
Vagrant Cascadian 80d9e967e3
teams: Add Vagrant Cascadian. 
* etc/teams.scm.in Add Vagrant Cascadian to Reproducible Builds team.
 2023-01-10 16:00:52 -08:00
Vagrant Cascadian 67caba5acb
teams: Add Reproducible Builds team. 
* etc/teams.scm.in (reproduciblebuilds): New team.
 2023-01-10 16:00:37 -08:00
Tobias Geerinckx-Rice 00ba3ad4c3
gnu: muse-sequencer: Also run on Wayland. 
* gnu/packages/music.scm (muse-sequencer)[inputs]: Add qtwayland-5.

Reported by f1refly in #guix.
 2023-01-08 01:00:23 +01:00
Arun Isaac cfd48888db
gnu: weechat-wee-slack: Update to 2.9.1. 
* gnu/packages/messaging.scm (weechat-wee-slack): Update to 2.9.1.
 2023-01-10 16:58:22 +00:00
Maxim Cournoyer 1ab92e8659
gnu: Add waveshare-dtoverlays. 
* gnu/packages/raspberry-pi.scm (waveshare-dtoverlays): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-01-10 11:49:46 -05:00
Maxim Cournoyer c42ae60a84
gnu: patman: Fix incomplete get-maintainer patch. 
The full set of patches already merged into the U-Boot is included for
simplicity and avoiding mistakes like the previous one, where a conflicting
hunk got dropped, causing the following error when running patman:

    WARNING: Unknown setting get_maintainer_script

* gnu/packages/bootloaders.scm (u-boot) [source]: Replace the
u-boot-patman-fix-help.patch, u-boot-patman-local-conf.patch and
u-boot-patman-get-maintainer.patch with u-boot-patman-guix-integration.patch.
* gnu/local.mk (dist_patch_DATA): Update patch registrations.
* gnu/packages/patches/u-boot-patman-fix-help.patch: Delete file.
* gnu/packages/patches/u-boot-patman-get-maintainer.patch: Likewise.
* gnu/packages/patches/u-boot-patman-local-conf.patch: Likewise.
* gnu/packages/patches/u-boot-patman-guix-integration.patch: New file.

Reported-by: Jelle Licht <jlicht@fsfe.org>
 2023-01-10 11:37:29 -05:00
jgart 65d24b9a24
doc: Fix documentation typo. 
* doc/guix.texi (VNC Services): Fix typo.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-01-10 11:12:11 -05:00
muradm dc403ec7f1
gnu: services: Fix fail2ban configuration serialization. 
This fixes a regression from 543d971ed2 whereby
match-lambda due to configuration field reordering.

* gnu/services/security.scm:
[serialize-fail2ban-ignore-cache-configuration]: Switch to match-record.
[serialize-fail2ban-jail-filter-configuration]: Switch to match-record.
[serialize-fail2ban-jail-action-configuration]: Switch to match-record.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-01-10 10:47:27 -05:00
Efraim Flashner d0942bfd2d
gnu: onedrive: Update to 2.4.23. 
* gnu/packages/sync.scm (onedrive): Update to 2.4.23.
 2023-01-10 13:01:37 +02:00
Alex Devaure 4b50dccc63
gnu: darktable: Update to 4.2.0. 
* gnu/packages/photo.scm (darktable): Update to 4.2.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-01-10 11:49:14 +01:00
Abhishek Cherath 5ef6d3ea11
gnu: Add guile-scheme-json-rpc. 
* gnu/packages/guile-xyz.scm (guile-scheme-json-rpc): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2023-01-10 11:49:14 +01:00
Paul A. Patience 35eaba00e6
gnu: Add gophernicus. 
* gnu/packages/web.scm (gophernicus): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-01-10 11:49:14 +01:00
Paul A. Patience 0c0dc72ac0
gnu: Add vger. 
* gnu/packages/web.scm (vger): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-01-10 11:49:14 +01:00
Giacomo Leidi 5f63811032
services: unattended-upgrade: Add 'operating-system-expression' field. 
* gnu/services/admin.scm (<unattended-upgrade-configuration>)
[operating-system-expression]: New field.
(unattended-upgrade-mcron-jobs): Honor it.
* doc/guix.texi (Unattended Upgrades): Document it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2023-01-10 11:49:14 +01:00
Bruno Victal 22e9b01bda
services: git-daemon: Deprecate 'git-daemon-service' procedure. 
* gnu/services/version-control.scm
(git-daemon-service): Define with 'define-deprecated'
* doc/guix.texi (Version Control Services): Replace with
'git-daemon-service-type'

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-01-10 11:49:13 +01:00
Luis Henrique Gomes Higino 7ebeafff15
gnu: neovim: Update to 0.8.2. 
* gnu/packages/vim.scm (neovim): Update to 0.8.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-01-10 11:49:13 +01:00
Ludovic Courtès 04bf1d9634
gnu: gromacs: Remove input labels and use gexps. 
* gnu/packages/chemistry.scm (gromacs)[arguments]: Turn into gexps.
[native-inputs]: Remove labels.  Remove (package-source googletest).
 2023-01-10 11:49:13 +01:00
Ludovic Courtès 7934e9c556
gnu: gromacs: Update to 2022.4. 
* gnu/packages/chemistry.scm (gromacs): Update to 2022.4.
* gnu/packages/patches/gromacs-tinyxml2.patch: Adjust accordingly.
 2023-01-10 11:49:13 +01:00
Jonathan Brielmaier 9b9004253b
gnu: keepassxc: Enable wayland support. 
* gnu/packages/password-utils.scm (keepassxc)[inputs]: Add qtwayland-5.
 2023-01-10 10:39:44 +01:00
Artyom V. Poptsov 5f7ce22201
gnu: Add ftxui. 
* gnu/packages/cpp.scm (ftxui): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2023-01-10 09:14:53 +01:00
Tobias Geerinckx-Rice 27e40a4463
gnu: bind: Update to 9.16.36. 
* gnu/packages/dns.scm (isc-bind): Update to 9.16.36.
 2023-01-08 01:00:02 +01:00
Tobias Geerinckx-Rice 6106044849
gnu: linux-libre: Bump max-silent-time even further. 
Aarch64 CI build still fail with ‘timed out after 3600 seconds of
silence’.

* gnu/packages/linux.scm (make-linux-libre*):
Increase the max-silent-time to 3 hours.

Reported by akirakyle in #guix.
 2023-01-08 01:00:02 +01:00
Tobias Geerinckx-Rice 03829e066d
gnu: emacs-hsluv: Name git checkout. 
* gnu/packages/emacs-xyz.scm (emacs-hsluv)[source]: Specify a FILE-NAME.
 2023-01-08 01:00:01 +01:00
Tobias Geerinckx-Rice 080c651a63
gnu: emacs-hide-lines: Name git checkout. 
* gnu/packages/emacs-xyz.scm (emacs-hide-lines)[source]: Specify a FILE-NAME.
 2023-01-08 01:00:01 +01:00
Tobias Geerinckx-Rice ec89b1ae16
gnu: emacs-syslog-mode: Name git checkout. 
* gnu/packages/emacs-xyz.scm (emacs-syslog-mode)[source]: Specify a FILE-NAME.
 2023-01-08 01:00:01 +01:00
Tobias Geerinckx-Rice e4673b45d3
doc: Fix <openntpd-configuration> openntpd default. 
* doc/guix.texi (Networking Services): <openntpd-configuration>'s
openntpd field takes a package: it does not default to a FILE-APPEND
call.
 2023-01-08 01:00:01 +01:00
Tobias Geerinckx-Rice ce1db7a544
gnu: fbcat: Fix typo in description. 
* gnu/packages/linux.scm (fbcat)[description]: Fix ‘therof’.  Add newline.
 2023-01-08 01:00:00 +01:00
Marius Bakke 79a9bb25bc
gnu: perftest: Update to 4.5-0.20. 
* gnu/packages/linux.scm (perftest): Update to 4.5-0.20.
[source]: Switch to GIT-FETCH.
[arguments]: Remove.
[native-inputs]: Add AUTOCONF, AUTOMAKE, and LIBTOOL.
[inputs]: Add PCIUTILS.
 2023-01-10 00:14:43 +01:00
Marius Bakke 73d5abd003
gnu: lib3mf: Update to 2.2.0. 
* gnu/packages/engineering.scm (lib3mf): Update to 2.2.0.
 2023-01-10 00:14:43 +01:00
Marius Bakke f29a17c84b
gnu: lib3mf: Remove bundled software. 
* gnu/packages/engineering.scm (lib3mf)[source](snippet): Delete bundled
copies of libzip and zlib.  Adjust header inclusions.
 2023-01-10 00:14:43 +01:00
Marius Bakke 5e36d4381f
gnu: lib3mf: Remove input labels. 
* gnu/packages/engineering.scm (lib3mf)[inputs]: Remove labels.
 2023-01-10 00:14:43 +01:00
Marius Bakke 5e101ab56f
gnu: lib3mf: Remove bundled ACT. 
* gnu/packages/engineering.scm (lib3mf)[source](modules, snippet): New fields.
[arguments]: Add phase to provide act binary.
[native-inputs]: Add AUTOMATIC-COMPONENT-TOOLKIT.
 2023-01-10 00:14:43 +01:00
Marius Bakke df33c8de73
gnu: Add automatic-component-toolkit. 
* gnu/packages/code.scm (automatic-component-toolkit): New variable.
 2023-01-10 00:14:42 +01:00
Ricardo Wurmus 8423ca9da8
gnu: r-biocset: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.12.1.
 2023-01-09 23:08:36 +01:00
Ricardo Wurmus 8ee7f8df76
gnu: r-biocviews: Update to 1.66.2. 
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.66.2.
 2023-01-09 23:08:36 +01:00
Ricardo Wurmus d41e85678a
gnu: r-variancepartition: Update to 1.28.1. 
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.28.1.
[propagated-inputs]: Add r-remacor.
 2023-01-09 23:08:36 +01:00
Ricardo Wurmus 850638df5a
gnu: r-flowworkspace: Update to 4.10.1. 
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.10.1.
[propagated-inputs]: Remove r-aws-s3, r-aws-signature, r-digest, r-lattice,
r-latticeextra, r-rcpp, r-rcpparmadillo, and r-rcppparallel; add
r-cpp11.
 2023-01-09 23:08:36 +01:00
Ricardo Wurmus 3ac0f4e62c
gnu: r-batchelor: Update to 1.14.1. 
* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.14.1.
 2023-01-09 23:08:35 +01:00
Ricardo Wurmus aca59da931
gnu: r-msnbase: Update to 2.24.2. 
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.24.2.
 2023-01-09 23:08:35 +01:00
Ricardo Wurmus f5629558b1
gnu: r-genomeinfodb: Update to 1.34.6. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.34.6.
 2023-01-09 23:08:35 +01:00
Ricardo Wurmus b37a9bfba6
gnu: r-bsgenome: Update to 1.66.2. 
* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.66.2.
 2023-01-09 23:08:35 +01:00
Ricardo Wurmus 3072990b03
gnu: r-biocparallel: Update to 1.32.5. 
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.32.5.
 2023-01-09 23:07:58 +01:00
Ricardo Wurmus 349d110ae0
gnu: Add r-remacor. 
* gnu/packages/cran.scm (r-remacor): New variable.
 2023-01-09 23:06:16 +01:00
Ricardo Wurmus 8e864f2a3b
gnu: Add r-clustergeneration. 
* gnu/packages/cran.scm (r-clustergeneration): New variable.
 2023-01-09 23:06:05 +01:00
Ricardo Wurmus 51e79fe737
gnu: Update copyright header. 
* gnu/packages/cran.scm: Update copyright header.
 2023-01-09 22:34:58 +01:00
Ricardo Wurmus 6e75790fc0
import/cran: Fix Bioconductor updater. 
* guix/import/cran.scm (latest-bioconductor-release): Use LATEST-VERSION
instead of VERSION, which is always #F.
 2023-01-09 22:32:58 +01:00
Ricardo Wurmus 387c486591
gnu: r-fpc: Update to 2.2-10. 
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-10.
 2023-01-09 22:30:51 +01:00
Ricardo Wurmus bd0da7c791
gnu: r-statmod: Update to 1.5.0. 
* gnu/packages/statistics.scm (r-statmod): Update to 1.5.0.
 2023-01-09 22:30:51 +01:00