TakeV/guix
1
0
Fork 0
Code Issues Pull requests Projects Releases Packages Wiki Activity
110773 commits 103 branches 35 tags 496 MiB
Commit graph

110773 commits

This branch
This branch
All branches
Author SHA1 Message Date
Bruno Victal
6f48efa9b8
services: configuration: Add user-defined sanitizer support. 
This changes the 'custom-serializer' field into a generic
'extra-args' field that can be extended to support new literals.
Within extra-args, the literals 'sanitizer' and 'serializer' allow
for user-defined sanitization and serialization procedures respectively.
The 'empty-serializer' was also added as a literal to be used as before.

To prevent confusion between the new “explicit” style of specifying
a sanitizer, and the old “implicit” style, the latter has been
deprecated, and a warning is issued if it is encountered.

* gnu/services/configuration.scm (define-configuration-helper):
Rename 'custom-serializer' to 'extra-args'.  Add support for literals
'sanitizer', 'serializer' and 'empty-serializer'.  Rename procedure
'field-sanitizer' to 'default-field-sanitizer' to avoid syntax clash.
Only define default field sanitizers if user-defined ones are absent.
(normalize-extra-args): New variable.
(<configuration-field>)[sanitizer]: New field.
* doc/guix.texi (Complex Configurations): Document the newly added
literals.
* tests/services/configuration.scm: Add tests for the new literals.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2023-04-02 12:31:51 +02:00
Liliana Marie Prikler
2ebbe8e9df
gnu: Add python-clingraph. 
* gnu/packages/potassco.scm (python-clingraph): New variable.
 2023-04-02 11:19:21 +02:00
Liliana Marie Prikler
383f1307c7
gnu: Separate potassco packages into their own module. 
* gnu/packages/potassco.scm: New file.
* gnu/packages/maths.scm (libpotassco, clasp, clingo, python-clingo)
(python-telingo): Move to potassco module.  Adjust imports accordingly.
* gnu/packages/emacs-xyz.scm (emacs-pasp-mode): Move to potassco module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add %D%/packages/potassco.scm.
 2023-04-02 11:19:21 +02:00
Liliana Marie Prikler
8fdf5535c4
gnu: python-imageio: Update to 2.26.0. 
* gnu/packages/python-xyz.scm (python-imageio): Update to 2.26.0.
[build-system]: Use pyproject-build-system.
[arguments]: Use G-Expressions.
<#:tests?>: Drop argument.
<#:test-flags>: New argument.
<#:phases>: Drop replacement for ‘check’.
Add ‘fix-source’ and ‘fix-failing-tests’.
[inputs]: Add freeimage.
[propagated-inputs]: Add python-imageio-ffmpeg.
 2023-04-02 11:19:21 +02:00
Liliana Marie Prikler
ac30e97664
gnu: Add python-imageio-ffmpeg. 
* gnu/packages/python-xyz.scm (python-imageio-ffmpeg): New variable.
 2023-04-02 11:19:21 +02:00
John Kehayias
f0c8cb44a4
gnu: emacs-slime: Add missing propagated input. 
Fixes error "Cannot open load file: No such file or directory,
../lib/macrostep" when trying to run slime.

* gnu/packages/emacs-xyz.scm (emacs-slime)[propagated-inputs]: Add
emacs-macrostep.
 2023-04-01 21:02:15 -04:00
Julien Lepiller
4483296da3
gnu: Add mecab-unidic. 
* gnu/packages/language.scm (mecab-unidic): New variable.
 2023-04-01 16:38:16 +02:00
Julien Lepiller
799abe85c5
gnu: Add mecab-ipadic. 
* gnu/packages/language.scm (mecab-ipadic): New variable.
 2023-04-01 16:38:14 +02:00
Julien Lepiller
3ab24ba216
gnu: Add mecab. 
* gnu/packages/language.scm (mecab): New variable.
* gnu/packages/patches/mecab-variable-param.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2023-04-01 16:37:46 +02:00
Maxim Cournoyer
47ea688fd2
gnu: conan: Disable more flaky tests. 
* gnu/packages/package-management.scm (conan) [arguments]: Run test suite
verbosely.  Skip the test_toolchain and test_list tests.
 2023-03-31 10:21:52 -04:00
Maxim Cournoyer
b8152d668d
gnu: conan: Do not hard-code package versions. 
* gnu/packages/package-management.scm (conan) [arguments]: Add #:modules
argument.  Avoid hard-coding package versions in configure-tests phase.
 2023-03-31 09:58:38 -04:00
Ricardo Wurmus
11956155e5
gnu: r-bionero: Update to 1.6.1. 
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.6.1.
 2023-03-31 15:25:24 +02:00
Ricardo Wurmus
04b87844df
gnu: r-flowclust: Update to 3.36.1. 
* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.36.1.
 2023-03-31 15:25:24 +02:00
Ricardo Wurmus
44599e7966
gnu: r-rhdf5filters: Update to 1.10.1. 
* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.10.1.
 2023-03-31 15:25:24 +02:00
Ricardo Wurmus
4afcef7847
gnu: r-biomart: Update to 2.54.1. 
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.54.1.
 2023-03-31 15:25:24 +02:00
Ricardo Wurmus
91c41b8ce7
gnu: r-annotationforge: Update to 1.40.2. 
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.40.2.
 2023-03-31 15:25:24 +02:00
Ricardo Wurmus
473bd926cf
gnu: r-anvil: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.10.2.
 2023-03-31 15:25:24 +02:00
Ricardo Wurmus
2c3383e8d8
gnu: r-amaretto: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-amaretto): Update to 1.14.0.
 2023-03-31 15:25:24 +02:00
Danny Milosavljevic
56de91b712
gnu: Add fbautostart. 
* gnu/packages/wm.scm (fbautostart): New variable.
 2023-03-31 14:45:27 +02:00
c4droid
1c6238794b
gnu: Add emu8051. 
* gnu/packages/emulators.scm (emu8051): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2023-03-31 19:31:47 +08:00
ivan-p-sokolov@ya.ru
a368e3cf6b
gnu: Add tree-sitter-heex. 
gnu/packages/tree-sitter.scm (tree-sitter-heex): New variable.

Signed-off-by: Andrew Tropin <andrew@trop.in>
 2023-03-31 08:10:29 +04:00
Leo Famulari
e914ae1571
gnu: linux-libre 5.15: Update to 5.15.105. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.105.
(linux-libre-5.15-pristine-source): Update hash.
 2023-03-30 23:09:25 -04:00
Leo Famulari
3967426686
gnu: linux-libre 6.1: Update to 6.1.22. 
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.22.
(linux-libre-6.1-pristine-source): Update hash.
 2023-03-30 23:09:25 -04:00
Leo Famulari
efcaa0d710
gnu: linux-libre: Update to 6.2.9. 
* gnu/packages/linux.scm (linux-libre-6.2-version): Update to 6.2.9.
(linux-libre-6.2-pristine-source): Update hash.
 2023-03-30 23:09:25 -04:00
Jonathan Brielmaier
cb0ae06d76
gnu: icedove: Update to 102.9.1 [fixes CVE-2023-28427]. 
* gnu/packages/gnuzilla.scm (%icedove-version): Update to 102.9.1.
(%icedove-build-id, thunderbird-comm-l10n): Update accordingly.
 2023-03-31 00:45:47 +02:00
Timo Wilken
e7558d1647
gnu: Add zsh-completions 
* gnu/packages/shellutils.scm (zsh-completions): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:17 +02:00
Timo Wilken
8c76eb6168
gnu: Add zsh-history-substring-search 
* gnu/packages/shellutils.scm (zsh-history-substring-search): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:17 +02:00
Bruno Victal
6d0ad93020
services: pam-limits-service-type: Deprecate file-like object support in favour for lists as service value. 
* doc/guix.texi (Base Services): Document it.
* gnu/local.mk: Register test.
* gnu/services/base.scm (pam-limits-service-type): Accept both lists and
file-like objects. Deprecate file-like object support.
* gnu/tests/pam.scm: New file.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Bruno Victal
ed50531885
services: base: Deprecate 'pam-limits-service' procedure. 
* doc/guix.texi (Base Services): Replace pam-limits-service with pam-limits-service-type.
* gnu/packages/benchmark.scm (python-locust)[description]: Update index anchor to manual.
* gnu/services/base.scm (pam-limits-service-type): Set default value.
(pam-limits-service): Deprecate procedure.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Bruno Victal
59878230f4
system: Remove obsolete GUIX_LOCPATH workaround. 
* gnu/system.scm (operating-system-environment-variables): Do not set GUIX_LOCPATH.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Nicolas Graves
1984d56b0e
gnu: Add scilab. 
* gnu/packages/maths.scm (scilab): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Nicolas Graves
13b2d110ee
gnu: Add suitesparse-3. 
* gnu/packages/maths.scm (suitesparse-3): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Nicolas Graves
f4d7b901db
gnu: matio: Add header file. 
* gnu/packages/maths.scm (matio):
  [arguments] (phases): Add phase install-matioConfig.h.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-30 23:18:16 +02:00
Ricardo Wurmus
42b938ae8c
gnu: Add audmes. 
* gnu/packages/engineering.scm (audmes): New variable.
 2023-03-30 22:40:09 +02:00
Maxim Cournoyer
be5e280e5f
Revert "gnu: network-manager: Update to 1.43.4." 
This reverts commit 01984774a2.  It is
apparently a development snapshot, and while working great for the most part, it
caused issues with WPA2 Enterprise WiFi configuration in
nm-connection-editor (see: https://issues.guix.gnu.org/62496).

Reported-by: John Kehayias <john.kehayias@protonmail.com>
 2023-03-30 15:57:14 -04:00
Maxim Cournoyer
7ceedc7df7
gnu: conan: Update to 2.0.2. 
* gnu/packages/package-management.scm (conan): Update to 2.0.2.
[arguments]: Delete relax-requirements phase.  Update patch-paths phase.
Add new patch-hard-coded-GCC-references, use-current-cmake-for-tests and
configure-tests phases.  Update check phase.
[native-inputs]: Replace autoconf with autoconf-wrapper.  Add libtool.
 2023-03-30 15:57:14 -04:00
Maxim Cournoyer
57c3662ddd
gnu: conan: Use gexps and remove input labels. 
* gnu/packages/package-management.scm (conan) [arguments]: Use gexps.  Use
search-input-file in patch-paths phase.
[native-inputs]: Remove labels.
 2023-03-30 15:57:14 -04:00
Ricardo Wurmus
113146d31c
gnu: r-mumin: Update to 1.47.5. 
* gnu/packages/statistics.scm (r-mumin): Update to 1.47.5.
[propagated-inputs]: Add r-insight.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
c029bac121
gnu: r-tclust: Update to 1.5-4. 
* gnu/packages/statistics.scm (r-tclust): Update to 1.5-4.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
aadc68f297
gnu: r-car: Update to 3.1-2. 
* gnu/packages/statistics.scm (r-car): Update to 3.1-2.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
25e67fdc4f
gnu: r-robustbase: Update to 0.95-1. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.95-1.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
8a69976f6c
gnu: r-hexbin: Update to 1.28.3. 
* gnu/packages/statistics.scm (r-hexbin): Update to 1.28.3.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
042dc3b65d
gnu: r-glmnet: Update to 4.1-7. 
* gnu/packages/statistics.scm (r-glmnet): Update to 4.1-7.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
5f416aa0e4
gnu: r-segmented: Update to 1.6-3. 
* gnu/packages/statistics.scm (r-segmented): Update to 1.6-3.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
3fa9594824
gnu: r-rcurl: Update to 1.98-1.12. 
* gnu/packages/statistics.scm (r-rcurl): Update to 1.98-1.12.
[inputs]: Remove zlib.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
082d5806ec
gnu: r-gtable: Update to 0.3.3. 
* gnu/packages/statistics.scm (r-gtable): Update to 0.3.3.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
8ad283c780
gnu: r-rmarkdown: Update to 2.21. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.21.
[propagated-inputs]: Add r-fontawesome.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
ffcb110ad9
gnu: r-hms: Update to 1.1.3. 
* gnu/packages/statistics.scm (r-hms): Update to 1.1.3.
[propagated-inputs]: Remove r-ellipsis.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
8ec84e8895
gnu: r-dbplyr: Update to 2.3.2. 
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.3.2.
 2023-03-30 19:21:08 +02:00
Ricardo Wurmus
d8fe4c68a6
gnu: r-dplyr: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-dplyr): Update to 1.1.1.
 2023-03-30 19:21:08 +02:00