Commit graph

51460 commits

Author SHA1 Message Date
Ricardo Wurmus 68cff11d72
gnu: r-rsqlite: Update to 2.1.4.
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.4.
2019-12-06 21:39:25 +01:00
Ricardo Wurmus 8a4cba335a
gnu: r-plotrix: Update to 3.7-7.
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-7.
2019-12-06 21:39:25 +01:00
Ricardo Wurmus d8d606300c
gnu: r-uwot: Update to 0.1.5.
* gnu/packages/cran.scm (r-uwot): Update to 0.1.5.
2019-12-06 21:39:25 +01:00
Ricardo Wurmus 96fe120b4e
gnu: r-irkernel: Update to 1.1.
* gnu/packages/cran.scm (r-irkernel): Update to 1.1.
2019-12-06 21:39:24 +01:00
Ricardo Wurmus bf3ea5ec5e
gnu: r-listenv: Update to 0.8.0.
* gnu/packages/cran.scm (r-listenv): Update to 0.8.0.
2019-12-06 21:39:24 +01:00
Ricardo Wurmus 3c8d39e5c0
gnu: r-spam: Update to 2.5-0.
* gnu/packages/cran.scm (r-spam): Update to 2.5-0.
2019-12-06 21:39:24 +01:00
Ricardo Wurmus b159b8a760
gnu: r-multicool: Update to 0.1-11.
* gnu/packages/cran.scm (r-multicool): Update to 0.1-11.
2019-12-06 21:39:24 +01:00
Ricardo Wurmus 6051268076
gnu: r-factoextra: Update to 1.0.6.
* gnu/packages/cran.scm (r-factoextra): Update to 1.0.6.
2019-12-06 21:39:24 +01:00
Ricardo Wurmus 9d617f53ab
gnu: r-renv: Update to 0.9.0.
* gnu/packages/cran.scm (r-renv): Update to 0.9.0.
2019-12-06 21:39:24 +01:00
Ricardo Wurmus e8ae22a6e5
gnu: r-openxlsx: Update to 4.1.4.
* gnu/packages/cran.scm (r-openxlsx): Update to 4.1.4.
[propagated-inputs]: Remove r-rlang.
2019-12-06 21:39:24 +01:00
Ricardo Wurmus 91a38c56e4
gnu: r-heatmaply: Update to 1.0.0.
* gnu/packages/cran.scm (r-heatmaply): Update to 1.0.0.
[propagated-inputs]: Add r-egg.
2019-12-06 21:39:24 +01:00
Ricardo Wurmus 0c836f58cf
gnu: Add r-egg.
* gnu/packages/cran.scm (r-egg): New variable.
2019-12-06 21:39:24 +01:00
Ricardo Wurmus 75f021f4a6
gnu: r-cubature: Update to 2.0.4.
* gnu/packages/cran.scm (r-cubature): Update to 2.0.4.
2019-12-06 21:39:24 +01:00
Ricardo Wurmus ff653ace8f
gnu: r-geometry: Update to 0.4.5.
* gnu/packages/cran.scm (r-geometry): Update to 0.4.5.
2019-12-06 21:39:24 +01:00
Ricardo Wurmus 103eef6442
gnu: r-htmltable: Update to 1.13.3.
* gnu/packages/cran.scm (r-htmltable): Update to 1.13.3.
2019-12-06 21:39:24 +01:00
Björn Höfling 92dddf6ba1
gnu: ruby-i18n: Update to 1.7.0.
* gnu/packages/ruby.scm (ruby-i18n): Update to 1.7.0.
[home-page]: Update to new location.
2019-12-06 20:09:15 +01:00
Björn Höfling 9de12df788
gnu: ruby-public-suffix: Update to 4.0.1.
* gnu/packages/ruby.scm (ruby-public-suffix): Update to 4.0.1.
2019-12-06 20:09:15 +01:00
Björn Höfling 91f7ee8738
gnu: ruby-addressable: Update to 2.7.0.
* gnu/packages/ruby.scm (ruby-addressable): Update to 2.7.0.
2019-12-06 20:09:14 +01:00
Björn Höfling b2244c6849
gnu: ruby-rspec-its: Update to 1.3.0.
* gnu/packages/ruby.scm (ruby-rspec-its): Update to 1.3.0.
[source]: Remove patch.
[arguments]: Add phase to fix ffi-dependency-version.
[native-inputs]: Add ruby-ffi.
2019-12-06 20:09:14 +01:00
Hartmut Goebel 0a71e34e49
gnu: Add python-geoip2.
* gnu/packages/geo.scm (python-geoip2): New variable.
2019-12-06 19:38:56 +01:00
Hartmut Goebel b1414a8136
gnu: Add python-maxminddb.
* gnu/packages/geo.scm (python-maxminddb): New variable.
2019-12-06 19:38:56 +01:00
Hartmut Goebel 53c9b39850
gnu: Add libmaxminddb.
* gnu/packages/geo.scm (libmaxminddb): New variable.
2019-12-06 19:38:56 +01:00
Hartmut Goebel a7469d1602
gnu: Add gunicorn.
* gnu/packages/python-web.scm (gunicorn): New variable
2019-12-06 19:38:56 +01:00
Jan Nieuwenhuizen 9720104c43
gnu: Add ncompress.
* gnu/packages/compression.scm (ncompress): New variable.
* gnu/packages/patches/compress-fix-softlinks.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-12-06 06:52:36 +01:00
Mark H Weaver d4d7bf60e8
gnu: linux-libre: Update to 5.3.15.
* gnu/packages/linux.scm (linux-libre-5.3-version): Update to 5.3.15.
(linux-libre-5.3-pristine-source): Update hash.
2019-12-05 14:29:45 -05:00
Mark H Weaver 4dcd63d5a5
gnu: linux-libre@4.19: Update to 4.19.88.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.88.
(linux-libre-4.19-pristine-source): Update hash.
2019-12-05 14:29:10 -05:00
Mark H Weaver 1c90bc7ee6
gnu: linux-libre@4.14: Update to 4.14.158.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.158.
(linux-libre-4.14-pristine-source): Update hash.
2019-12-05 14:28:34 -05:00
Mark H Weaver 5ecee81290
gnu: linux-libre@4.9: Update to 4.9.206.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.206.
(linux-libre-4.9-pristine-source): Update hash.
2019-12-05 14:27:58 -05:00
Mark H Weaver 2eec86e145
gnu: linux-libre@4.4: Update to 4.4.206.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.206.
(linux-libre-4.4-pristine-source): Update hash.
2019-12-05 14:26:46 -05:00
Clément Lassieur 2c2fc24b89
gnu: Add west.
* gnu/packages/embedded.scm (west): New variable.
2019-12-05 16:54:59 +01:00
Clément Lassieur 34bf686952
gnu: Add python-pykwalify.
* gnu/packages/python-xyz.scm (python-pykwalify): New variable.
2019-12-05 16:54:59 +01:00
Pierre Neidhardt 88f06fd015
gnu: Really move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm.
* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
  javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* guix/build-system/minify.scm (default-uglify-js): Find uglify-js in
  javascript module instead of lisp.
2019-12-05 16:23:06 +01:00
Tobias Geerinckx-Rice ba362ec867
gnu: libimagequant: Update to 2.12.5.
* gnu/packages/image.scm (libimagequant): Update to 2.12.5.
2019-12-05 15:38:52 +01:00
Tobias Geerinckx-Rice 252f44ffd9
gnu: procenv: Update to 0.51.
* gnu/packages/linux.scm (procenv): Update to 0.51.
2019-12-05 15:38:52 +01:00
Tobias Geerinckx-Rice d9544d91a6
Revert "gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm."
This reverts commit ac1ee30f4f, which
still breaks ‘guix pull’.
2019-12-05 15:38:52 +01:00
Efraim Flashner b665a24619
gnu: librsvg-next: Use generate-all-checksums.
* gnu/packages/gnome.scm (librsvg-next)[arguments]: Use
generate-all-checksums instead of manually traversing the directories.
2019-12-05 16:31:21 +02:00
Efraim Flashner 73bd8ab669
Revert "build-system/linux-module: Accept a #:make-flags keyword."
I should've tested this better before pushing the commit.

This reverts commit fabd4900d8.
2019-12-05 15:37:39 +02:00
Pierre Neidhardt ac1ee30f4f
gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm.
* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
  javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* guix/build-system/minify.scm (default-uglify-js): Find uglify-js in
  javascript module instead of lisp.
2019-12-05 13:48:47 +01:00
Marius Bakke 29e621a013
gnu: Remove unused module import.
* gnu/packages/image.scm: Do not import (gnu packages gcc).
2019-12-04 23:18:24 +01:00
Marius Bakke 0fa9f29a51
gnu: libjpeg-turbo: Fix CVE-2019-13960 and CVE-2019-2201.
* gnu/packages/patches/libjpeg-turbo-CVE-2019-2201.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/image.scm (libjpeg-turbo/fixed): New variable.
(libjpeg-turbo)[replacement]: New field.
2019-12-04 23:18:24 +01:00
Tobias Geerinckx-Rice 4fe7adcbcc
gnu: pd: Update to 0.50-2.
* gnu/packages/music.scm (pd): Update to 0.50-2.
2019-12-04 23:10:21 +01:00
Tobias Geerinckx-Rice ce63a3b90a
gnu: libgig: Update to 4.2.0.
* gnu/packages/music.scm (libgig): Update to 4.2.0.
2019-12-04 23:10:21 +01:00
Tobias Geerinckx-Rice 29a87ed18c
gnu: imapfilter: Update to 2.6.16.
* gnu/packages/mail.scm (imapfilter): Update to 2.6.16.
[arguments]: Remove ‘fix-include-path’ phase.
2019-12-04 23:10:21 +01:00
Tobias Geerinckx-Rice 8f15c1c9fe
gnu: mpop: Update to 1.4.6.
* gnu/packages/mail.scm (mpop): Update to 1.4.6.
2019-12-04 23:10:21 +01:00
Tobias Geerinckx-Rice f3d4015385
gnu: girara: Fetch sources from git.
The tarball URI is having server issues.  Use the upstream git
repository instead until this is resolved.

Reported by Marius Bakke <mbakke@fastmail.com>.

* gnu/packages/gtk.scm (girara)[source]: Switch to GIT-FETCH.
2019-12-04 23:10:21 +01:00
Pierre Neidhardt 6b84a31d90
gnu: emacs-org-contrib: Fix build.
* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Refer to the updated
installation directory.
2019-12-04 22:29:38 +01:00
Pierre Neidhardt e18aeb416d
gnu: emacs-scel: Fix build.
* gnu/packages/emacs-xyz.scm (emacs-scel): Refer to the updated installation
directory.
2019-12-04 22:29:38 +01:00
Leo Famulari c63d4725d1
gnu: knot: Update to 2.9.1 [fixes CVE-2019-19331].
* gnu/packages/dns.scm (knot): Update to 2.9.1.
2019-12-04 16:09:20 -05:00
Pierre Neidhardt 1cd9149938
gnu: notmuch: Fix build.
* gnu/packages/mail.scm (notmuch): Refer to the updated installation
directory.
2019-12-04 21:57:12 +01:00
Marius Bakke 66c15f72f8
gnu: ffmpeg: Update to 3.4.7.
* gnu/packages/video.scm (ffmpeg-3.4): Update to 3.4.7.
2019-12-04 21:26:56 +01:00