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93857 commits

Author SHA1 Message Date
Ricardo Wurmus 6434420538
gnu: r-densityclust: Update to 0.3.1.
* gnu/packages/cran.scm (r-densityclust): Update to 0.3.1.
2022-03-15 20:18:47 +01:00
Ricardo Wurmus f8924f7e51
gnu: r-speedglm: Update to 0.3-4.
* gnu/packages/cran.scm (r-speedglm): Update to 0.3-4.
2022-03-15 20:18:47 +01:00
Ricardo Wurmus 2386d6f8b1
gnu: r-tidytree: Update to 0.3.8.
* gnu/packages/cran.scm (r-tidytree): Update to 0.3.8.
2022-03-15 20:18:47 +01:00
Ricardo Wurmus 89d0dac10c
gnu: r-admisc: Update to 0.24.
* gnu/packages/cran.scm (r-admisc): Update to 0.24.
2022-03-15 20:18:47 +01:00
Ricardo Wurmus 054e06f168
gnu: r-ks: Update to 1.13.4.
* gnu/packages/cran.scm (r-ks): Update to 1.13.4.
2022-03-15 20:18:46 +01:00
Ricardo Wurmus db9ddd20c3
gnu: r-chk: Update to 0.8.0.
* gnu/packages/cran.scm (r-chk): Update to 0.8.0.
2022-03-15 20:18:46 +01:00
Ricardo Wurmus 8f6c93bec4
gnu: r-mvabund: Update to 4.2.1.
* gnu/packages/cran.scm (r-mvabund): Update to 4.2.1.
2022-03-15 20:18:46 +01:00
Ricardo Wurmus 710a8f93c2
gnu: r-gee: Update to 4.13-22.
* gnu/packages/cran.scm (r-gee): Update to 4.13-22.
2022-03-15 20:18:46 +01:00
Ricardo Wurmus 31454078f9
gnu: r-abjutils: Update to 0.3.2.
* gnu/packages/cran.scm (r-abjutils): Update to 0.3.2.
2022-03-15 20:18:46 +01:00
Ricardo Wurmus c191a90357
gnu: r-doby: Update to 4.6.12.
* gnu/packages/cran.scm (r-doby): Update to 4.6.12.
[propagated-inputs]: Remove r-curry.
2022-03-15 20:18:46 +01:00
Ricardo Wurmus 0121716497
gnu: r-insight: Update to 0.16.0.
* gnu/packages/cran.scm (r-insight): Update to 0.16.0.
2022-03-15 20:18:46 +01:00
Ricardo Wurmus 910e9b88a9
gnu: r-rdpack: Update to 2.1.4.
* gnu/packages/cran.scm (r-rdpack): Update to 2.1.4.
2022-03-15 20:18:46 +01:00
Ricardo Wurmus 6e28b3beae
gnu: r-fst: Update to 0.9.8.
* gnu/packages/cran.scm (r-fst): Update to 0.9.8.
[propagated-inputs]: Add r-fstcore.
2022-03-15 20:18:45 +01:00
Ricardo Wurmus cd994f8497
gnu: r-dosnow: Update to 1.0.20.
* gnu/packages/cran.scm (r-dosnow): Update to 1.0.20.
2022-03-15 20:18:45 +01:00
Ricardo Wurmus 8c0021fee2
gnu: r-parsedate: Update to 1.3.0.
* gnu/packages/cran.scm (r-parsedate): Update to 1.3.0.
[propagated-inputs]: Remove r-rematch2.
2022-03-15 20:18:45 +01:00
Ricardo Wurmus c68c5e4ff2
gnu: r-tinytex: Update to 0.37.
* gnu/packages/cran.scm (r-tinytex): Update to 0.37.
2022-03-15 20:18:45 +01:00
Ricardo Wurmus 6a18addb0f
gnu: r-pillar: Update to 1.7.0.
* gnu/packages/cran.scm (r-pillar): Update to 1.7.0.
2022-03-15 20:18:45 +01:00
Ricardo Wurmus 9cc0253167
gnu: r-seriation: Update to 1.3.2.
* gnu/packages/cran.scm (r-seriation): Update to 1.3.2.
2022-03-15 20:18:45 +01:00
Ricardo Wurmus e085aee822
gnu: r-tsp: Update to 1.2-0.
* gnu/packages/cran.scm (r-tsp): Update to 1.2-0.
2022-03-15 20:18:45 +01:00
Ricardo Wurmus 24fe3f379f
gnu: r-cli: Update to 3.2.0.
* gnu/packages/cran.scm (r-cli): Update to 3.2.0.
2022-03-15 20:18:45 +01:00
Ricardo Wurmus 1383dde1b2
gnu: r-jomo: Update to 2.7-3.
* gnu/packages/cran.scm (r-jomo): Update to 2.7-3.
[propagated-inputs]: Add r-tibble.
2022-03-15 20:18:44 +01:00
Ricardo Wurmus 421e82ae88
gnu: r-recipes: Update to 0.2.0.
* gnu/packages/cran.scm (r-recipes): Update to 0.2.0.
[propagated-inputs]: Add r-hardhat.
2022-03-15 20:18:44 +01:00
Ricardo Wurmus 4b2060cd5f
gnu: r-generics: Update to 0.1.2.
* gnu/packages/cran.scm (r-generics): Update to 0.1.2.
2022-03-15 20:18:44 +01:00
Ricardo Wurmus f0381eb5ce
gnu: r-gower: Update to 1.0.0.
* gnu/packages/cran.scm (r-gower): Update to 1.0.0.
2022-03-15 20:18:44 +01:00
Ricardo Wurmus 9fe1ba50e9
gnu: r-magic: Update to 1.6-0.
* gnu/packages/cran.scm (r-magic): Update to 1.6-0.
2022-03-15 20:18:44 +01:00
Ricardo Wurmus 7ed3d5d2bd
gnu: r-cvst: Update to 0.2-3.
* gnu/packages/cran.scm (r-cvst): Update to 0.2-3.
2022-03-15 20:18:44 +01:00
Ricardo Wurmus 87981e94f7
gnu: r-circlize: Update to 0.4.14.
* gnu/packages/cran.scm (r-circlize): Update to 0.4.14.
2022-03-15 20:18:44 +01:00
Ricardo Wurmus a743923d23
gnu: r-rcppthread: Update to 2.0.2.
* gnu/packages/cran.scm (r-rcppthread): Update to 2.0.2.
2022-03-15 20:18:44 +01:00
Ricardo Wurmus 79a8f31d8f
gnu: r-glue: Update to 1.6.2.
* gnu/packages/cran.scm (r-glue): Update to 1.6.2.
2022-03-15 20:18:44 +01:00
Ricardo Wurmus 77470c2a34
gnu: r-colorspace: Update to 2.0-3.
* gnu/packages/cran.scm (r-colorspace): Update to 2.0-3.
2022-03-15 20:18:43 +01:00
Ricardo Wurmus 86ad25e9ab
gnu: r-jsonlite: Update to 1.8.0.
* gnu/packages/cran.scm (r-jsonlite): Update to 1.8.0.
2022-03-15 20:18:43 +01:00
Ricardo Wurmus ba4a6487f6
gnu: r-ashr: Update to 2.2-54.
* gnu/packages/cran.scm (r-ashr): Update to 2.2-54.
2022-03-15 20:18:43 +01:00
Ricardo Wurmus 17349440cb
gnu: r-clipr: Update to 0.8.0.
* gnu/packages/cran.scm (r-clipr): Update to 0.8.0.
2022-03-15 20:18:43 +01:00
Ricardo Wurmus 09957aa2c7
gnu: r-v8: Update to 4.1.0.
* gnu/packages/cran.scm (r-v8): Update to 4.1.0.
2022-03-15 20:18:43 +01:00
Ricardo Wurmus 4989e09cc0
gnu: Add r-fstcore.
* gnu/packages/cran.scm (r-fstcore): New variable.
2022-03-15 20:18:43 +01:00
Ricardo Wurmus 70c8a412f6
gnu: Add r-spatstat-random.
* gnu/packages/cran.scm (r-spatstat-random): New variable.
2022-03-15 20:18:43 +01:00
Ricardo Wurmus 0d5a01ab0f
gnu: r-torch: Update to 0.7.0.
* gnu/packages/cran.scm (r-torch): Update to 0.7.0.
2022-03-15 20:18:43 +01:00
Ricardo Wurmus 95f9c44362
gnu: liblantern: Update to 0.7.0.
* gnu/packages/machine-learning.scm (liblantern): Update to 0.7.0.
2022-03-15 20:18:42 +01:00
Ricardo Wurmus d7636c8bb7
gnu: python-pytorch-for-r-torch: Reuse python-pytorch.
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Use
definition on python-pytorch, thereby updating to 1.10.2.
2022-03-15 20:18:42 +01:00
Ricardo Wurmus 6472ccf4db
gnu: r-leaflet: Update to 2.1.0.
* gnu/packages/cran.scm (r-leaflet): Update to 2.1.0.
2022-03-15 20:18:42 +01:00
Ricardo Wurmus feb6bb28b4
gnu: apache-arrow: Update to 7.0.0.
* gnu/packages/databases.scm (apache-arrow): Update to 7.0.0.
2022-03-15 20:18:42 +01:00
Ricardo Wurmus 79607549e2
gnu: r-shinyjqui: Update to 0.4.1.
* gnu/packages/cran.scm (r-shinyjqui): Update to 0.4.1.
[source]: Delete minified JavaScript file.
[arguments]: Minify additional JavaScript file from source.
[propagated-inputs]: Add r-rlang.
[native-inputs]: Add jquery.ui.touch-punch.js.
2022-03-15 20:18:38 +01:00
Mathieu Othacehe 2543cb4854
images: novena: Fix build.
* gnu/system/images/novena.scm (novena-barebones-os)[kernel]: Use the
linux-libre-arm-generic kernel.
[initrd-modules]: Do not specify any modules as sdhci-esdhc-imx, ahci_imx and
i2c-dev are built-in in the arm-generic kernel.
2022-03-15 13:14:29 +01:00
Vagrant Cascadian af8d568f82
gnu: diffoscope: Update to 207.
* gnu/packages/diffoscope.scm (diffoscope): Update to 207.
2022-03-14 16:06:05 -07:00
Brendan Tildesley 57fe92dded
gnu: crypto++: Update to 8.6.0.
* gnu/packages/crypto.scm (crypto++): Update to 8.6.0.

Note: This release includes a fix for a bug where code using AVX2
instructions produced incorrect encrypted files:

https://github.com/weidai11/cryptopp/issues/1069
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-03-14 23:32:30 +01:00
Ludovic Courtès 3b80e79f21
transformations: '--tune' prints supported micro-architectures upon error.
* guix/transformations.scm (build-system-with-tuning-compiler): Add
&fix-hint condition when asked for an unsupported micro-architecture.
2022-03-14 23:32:30 +01:00
Ludovic Courtès 15bb35d0c4
gnu: gcc@11: Inherit supported micro-architectures from gcc@10.
Previously, gcc@11 would inherit the 'compiler-cpu-architectures'
property from gcc@8.

* gnu/packages/gcc.scm (gcc-11)[properties]: New field.
2022-03-14 23:32:26 +01:00
Ludovic Courtès e86293d250
gnu: ocaml-lacaml: Do not build with "-march=native".
* gnu/packages/ocaml.scm (ocaml-lacaml)[origin]: Add 'snippet'.
[properties]: New field.
2022-03-14 23:32:19 +01:00
Ludovic Courtès a359f3a49c
build-system/ocaml: Use standard packages as "build inputs".
Conceptually, "standard packages" (GCC, Coreutils, etc.) are "build
inputs".  In the absence of cross-compilation support, this change has
no effect, except for things like '--tune' that expect the compiler to
be among the build inputs.

* guix/build-system/ocaml.scm (lower): Move (standard-packages) from
'host-inputs' to 'build-inputs'.
2022-03-14 23:32:18 +01:00
Guillaume Le Vaillant f8aa76ab1f
gnu: rtl-sdr: Fix udev rules.
This is a followup to bcc13ee8a1.

* gnu/packages/radio.scm (rtl-sdr)[arguments]: Add 'fix-udev-rules' phase.
2022-03-14 15:42:46 +01:00