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Author SHA1 Message Date
Julien Lepiller 01706f6e00
gnu: Add java-jopt-simple-4. 
* gnu/packges/java.scm (java-jopt-simple-4): New variable.
(java-jopt-simple): Install to maven repository structure.
 2021-06-22 13:10:38 +02:00
Julien Lepiller 7f902d368d
guix: java-utils: Look for actual jar files. 
* guix/build/java-utils.scm (install-from-pom): Fix `find-files` to look
only for jar files.
 2021-06-22 13:10:36 +02:00
Julien Lepiller cc09453862
guix: maven: Use a temporary file to fix pom files. 
* guix/build/maven/pom.scm (fix-pom-dependencies): Actually use the
temporary file that was created.
 2021-06-22 13:10:32 +02:00
Julien Lepiller 5bb3395c42
guix: maven: Look in local packages when searching for package version. 
* guix/build/maven/pom.scm (fix-pom-dependencies): Also look at local
packages when looking for a package version.
 2021-06-22 13:10:30 +02:00
Julien Lepiller 0db1393b73
guix: maven: Support fixing modules. 
* guix/build/maven/pom.scm (fix-pom-dependencies): Support fixing
modules that do not exist.
* guix/build/maven-build-system.scm (fix-pom): Fix modules.
 2021-06-22 13:10:28 +02:00
Julien Lepiller 9711970c99
guix: maven: Support fixing extensions. 
* guix/build/maven/pom.scm (fix-pom-dependencies): Add support for fixing
extension versions.
 2021-06-22 13:10:27 +02:00
Julien Lepiller 6ec2109ab6
guix: maven: Simplify finding local packages and modules. 
* guix/build/maven-build-system (fix-pom): Fix a single pom file without
recursing
(fix-pom-files): Find local packages and all submodules, and fix them
all at once.
(add-local-package): Move to...
* guix/build/maven/pom.scm (add-local-package): ...here.
(pom-and-submodules, pom-local-packages): New procedures.
 2021-06-22 13:10:24 +02:00
Julien Lepiller 573b43c116
guix: maven: Simplify finding version and group information. 
* guix/build/maven/pom.scm (pom-version, pom-groupid): Do not use inputs
and local packages information anymore. Adapt file to new arguments.
* guix/build/maven-build-system.scm: Adapt to new arguments.
* guix/build/java-utils.scm: Adapt to new arguments.
 2021-06-22 13:09:57 +02:00
Julien Lepiller 4c98db94b0
guix: java-utils: Factorize pom.xml generation. 
* guix/build/java-utils.scm (generate-pom.xml): New procedure.
* gnu/packages/maven.scm (java-surefire-junit4): Use it.
* gnu/packages/java.scm (java-qdox, java-jsr250, java-jsr305)
(java-aopalliance, java-jboss-el-api-spec)
(java-jboss-interceptors-api-spec): Use it.
(java-qdox-M9): Ensure the generated pom file has the correct version.
 2021-06-22 13:09:41 +02:00
Pierre Neidhardt a40207bd6f
gnu: nyxt: Update to 2.1.0. 
* gnu/packages/web-browsers.scm (nyxt): Update to 2.1.0.
 2021-06-22 12:58:43 +02:00
Efraim Flashner d89ef8a7d8
gnu: libreoffice: Update to 7.1.4.2. 
* gnu/packages/libreoffice.scm (libreoffice)[inputs]: Add box2d, dtoa.
[arguments]: Adjust custom 'prepare-src, 'bin-and-desktop-install phases.
Add custom 'insert-external-tarballs phase. Adjust configure-flags to
build without skia. Remove deprecated make-flag
 2021-06-22 13:51:11 +03:00
Efraim Flashner 4aae607119
gnu: orcus: Update to 0.16.1. 
* gnu/packages/libreoffice.scm (orcus): Update to 0.16.1.
 2021-06-22 13:51:11 +03:00
Efraim Flashner e1f5517c46
gnu: orcus: Don't build static library. 
* gnu/packages/libreoffice.scm (orcus)[arguments]: Add configure-flag to
skip static library.
 2021-06-22 13:51:11 +03:00
Efraim Flashner cb180427d0
gnu: ixion: Update to 0.16.1. 
* gnu/packages/libreoffice.scm (ixion): Update to 0.16.1.
 2021-06-22 13:51:11 +03:00
Efraim Flashner 3623696db1
gnu: ocaml-uri: Use a source file-name. 
* gnu/packages/ocaml.scm (ocaml-uri)[source]: Add a file-name field.
 2021-06-22 13:49:06 +03:00
Efraim Flashner 27f2b79db3
gnu: emacs-shell-command+: Use a source file-name. 
* gnu/packages/emacs-xyz.scm (emacs-shell-command+)[source]: Add a
file-name field.
 2021-06-22 13:49:05 +03:00
Efraim Flashner 07d2c72d39
gnu: ensembl-vep: Use a source file-name. 
* gnu/packages/bioinformatics.scm (ensembl-vep)[source]: Add a file-name
field.
 2021-06-22 13:49:05 +03:00
Efraim Flashner 920a36392a
gnu: Add box2d. 
* gnu/packages/game-development.scm (box2d): New variable.
 2021-06-22 13:49:05 +03:00
Efraim Flashner bc6c99e52c
gnu: libreoffice: Add vendor string. 
Previously: This release was supplied by nixbld.
Now:        This release was supplied by GNU Guix.

* gnu/packages/libreoffice.scm (libreoffice)[arguments]: Add
configure-flag to set vendor to 'GNU Guix'.
 2021-06-22 13:49:02 +03:00
Vinicius Monego e88f205876
gnu: Add rust-battery-0.7. 
* gnu/packages/crates-io.scm (rust-battery-0.7): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-22 11:02:01 +02:00
Vinicius Monego d07bade71e
gnu: rust-lazycell-1: Update to 1.3.0. 
* gnu/packages/crates-io.scm (rust-lazycell-1): Update to 1.3.0.
[arguments]: Remove #:skip-build.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-22 11:00:11 +02:00
Vinicius Monego 2de5297a08
gnu: Add rust-mach-0.3. 
* gnu/packages/crates-io.scm (rust-mach-0.3): New variable.
(rust-mach-0.2): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-22 10:59:52 +02:00
Vinicius Monego f80f7329ce
gnu: Add rust-uom-0.30. 
* gnu/packages/crates-io.scm (rust-uom-0.30): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-22 10:59:42 +02:00
Vinicius Monego 400f1caf3f
gnu: Add rust-uom-0.31. 
* gnu/packages/crates-io.scm (rust-uom-0.31): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-22 10:59:27 +02:00
Vinícius dos Santos Oliveira 9ba41ea823
gnu: emilua: Update to 0.3.2. 
* gnu/packages/lua.scm (emilua): Update to 0.3.2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-22 10:54:16 +02:00
Sharlatan Hellseher 17972082cc
gnu: Add gopkg.in/yaml.v3. 
* gnu/packages/golang.scm (go-gopkg-in-yml-v3): New variable

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-22 10:51:22 +02:00
Nicolas Goaziou 61a9ba398f
gnu: widelands: Update description. 
* gnu/packages/games.scm (widelands)[description]: Update to mirror changes in
the stable release.
 2021-06-22 10:39:40 +02:00
Nicolas Goaziou 662316b0d6
gnu: widelands: Ensure Guix catches versioning scheme switch. 
* gnu/packages/games.scm (widelands-21): New variable.

"21" was the last beta release.  Upstream has now switched to a new versioning
scheme, with lesser numbers.
 2021-06-22 10:35:58 +02:00
Felix Gruber b6fc274637
gnu: widelands: Update to 1.0. 
* gnu/packages/games.scm (widelands): Update to 1.0.
[source]: Download from github as there is no tarball for v1.0 on their
website.
[inputs]: Add curl.
* gnu/packages/patches/widelands-system-wide_minizip.patch: Adjust for
1.0. CmakeLists.txt now already defines CMAKE_MODULE_PATH, so I've moved
FindMinizip.cmake to this path.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-06-22 10:27:21 +02:00
Ricardo Wurmus 44bccf414b
gnu: Add perl-cworld-dekker. 
* gnu/packages/bioinformatics.scm (perl-cworld-dekker): New variable.
 2021-06-22 08:40:56 +02:00
Ricardo Wurmus 14f72bd48d
gnu: python-ddt: Update to 1.4.2. 
* gnu/packages/python-xyz.scm (python-ddt): Update to 1.4.2.
 2021-06-22 08:34:51 +02:00
Nicolas Goaziou d534d076f0
gnu: emacs-which-key: Update to 3.5.3. 
* gnu/packages/emacs-xyz.scm (emacs-which-key): Update to 3.5.3.
 2021-06-22 07:58:57 +02:00
Raghav Gururajan adf485c815
gnu: dino: Enable some features. 
* gnu/packages/messaging.scm (dino): Add comments for v0.3.0 release.
[inputs]: Add gspell and icu4c.
 2021-06-22 01:02:01 -04:00
Raghav Gururajan 43cec0d117
gnu: dino: Add missing inputs. 
These new inputs are referenced by the package but was missing in
the package definition. Some of these inputs might have been used
by the package indirectly via propagation from other inputs.

* gnu/packages/messaging.scm (dino)[native-inputs]: Add gobject-introspection.
[inputs]: Add atk, cairo, gdk-pixbug+svg, libnice and pango.
 2021-06-22 01:01:57 -04:00
Raghav Gururajan e3a468b206
gnu: dino: Remove duplicate inputs. 
* gnu/packages/messaging.scm (dino)[inputs]: Remove duplicate gpgme,
gtk+, glib-networking and gsettings-desktop-schemas.
 2021-06-22 01:01:11 -04:00
Marius Bakke a1c7537548
gnu: uBlock Origin: Update to 1.36.0. 
* gnu/packages/browser-extensions.scm (uassets): Update to 20d21ad7e.
(ublock-origin): Update to 1.36.0.
 2021-06-22 00:09:40 +02:00
Marius Bakke a03912ed86
gnu: ungoogled-chromium: Update to 91.0.4472.114-0.a9eb6fd. 
* gnu/packages/chromium.scm (%chromium-version): Set to 91.0.4472.114.
(%ungoogled-revision): Set to a9eb6fd.
(%ungoogled-origin, ungoogled-chromium): Update hashes.
 2021-06-22 00:09:40 +02:00
Tobias Geerinckx-Rice 4343476a3b
gnu: dovecot-pigeonhole: Update to 0.5.15 [fixes CVE-2020-28200]. 
* gnu/packages/mail.scm (dovecot-pigeonhole): Update to 0.5.15.
 2021-06-21 18:38:06 +02:00
Tobias Geerinckx-Rice 18968a7752
gnu: dovecot: Update to 2.3.15 [fixes CVE-2021-29157 & CVE-2021-33515]. 
* gnu/packages/mail.scm (dovecot): Update to 2.3.15.
 2021-06-21 18:38:06 +02:00
Tobias Geerinckx-Rice fe255fb8bc
import: egg: Edit egg->guix-package docstring. 
* guix/import/egg.scm (egg->guix-package): Edit docstring.
 2021-06-21 18:27:19 +02:00
Tobias Geerinckx-Rice 885d05acb9
gnu: capnproto: Fix typo in phase name. 
* gnu/packages/serialization.scm (capnproto)[arguments]: Rename the
'use-tmp-for-tempory-files phase to 'use-tmp-for-temporary-files.
 2021-06-21 18:27:19 +02:00
Tobias Geerinckx-Rice 98ae5c9d84
gnu: lxcfs: Fix typos in description. 
* gnu/packages/virtualization.scm (lxcfs)[synopsis, description]: Fix typos.
 2021-06-21 18:27:19 +02:00
Tobias Geerinckx-Rice 23e3d2d9be
gnu: font-overpass: Fix typo in description. 
* gnu/packages/fonts.scm (font-overpass)[description]: Fix typo.
 2021-06-21 18:27:18 +02:00
Ricardo Wurmus c44271445a
gnu: r-monocle3: Update to 1.0.0. 
* gnu/packages/bioconductor.scm (r-monocle3): Update to 1.0.0.
[propagated-inputs]: Add r-batchelor, r-leidenbase, and r-rsample.
 2021-06-21 17:53:26 +02:00
Ricardo Wurmus 7209beb694
gnu: Add r-leidenbase. 
* gnu/packages/bioconductor.scm (r-leidenbase): New variable.
 2021-06-21 17:53:26 +02:00
Ricardo Wurmus a41bddd29d
gnu: Add r-batchelor. 
* gnu/packages/bioconductor.scm (r-batchelor): New variable.
 2021-06-21 17:53:26 +02:00
Ricardo Wurmus 278e1c090e
gnu: Add r-residualmatrix. 
* gnu/packages/bioconductor.scm (r-residualmatrix): New variable.
 2021-06-21 17:53:26 +02:00
Ricardo Wurmus 111aa862ec
gnu: r-monocle3: Add missing input. 
* gnu/packages/bioconductor.scm (r-monocle3)[propagated-inputs]: Add
r-assertthat.
 2021-06-21 17:53:25 +02:00
Ricardo Wurmus 35b31a18be
gnu: python-cfn-lint: Update to 0.51.0. 
* gnu/packages/python-web.scm (python-cfn-lint): Update to 0.51.0.
[arguments]: Delete another test that attempts to access the internet.
 2021-06-21 17:53:25 +02:00
Ricardo Wurmus ac02d423d3
gnu: python-pyyaml: Update to 5.4.1. 
* gnu/packages/python-xyz.scm (python-pyyaml): Update to 5.4.1.
 2021-06-21 17:53:25 +02:00