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Author SHA1 Message Date
Ricardo Wurmus
59b2864d6c
gnu: r-scater: Update to 1.6.3. 
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.6.3.
 2018-02-19 09:53:05 +01:00
Ricardo Wurmus
d578278e35
gnu: r-gviz: Update to 1.22.3. 
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.22.3.
 2018-02-19 09:53:05 +01:00
Ricardo Wurmus
ca7855fcd2
gnu: r-gprofiler: Update to 0.6.4. 
* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.4.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus
8877ab432e
gnu: r-ensembldb: Update to 2.2.2. 
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.2.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus
ebec98ae1d
gnu: r-seurat: Update to 2.2.1. 
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.2.1.
[propagated-inputs]: Remove r-nmf; add r-metap.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus
3118b28644
gnu: r-qtl: Update to 1.42-7. 
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.42-7.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus
824c200475
gnu: r-genomicranges: Update to 1.30.2. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.30.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus
e8484711c6
gnu: r-getopt: Update to 1.20.2. 
* gnu/packages/bioinformatics.scm (r-getopt): Update to 1.20.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus
1e898bbaea
gnu: r-pryr: Update to 0.1.4. 
* gnu/packages/statistics.scm (r-pryr): Update to 0.1.4.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus
50ee54eabd
gnu: r-bh: Update to 1.66.0-1. 
* gnu/packages/statistics.scm (r-bh): Update to 1.66.0-1.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus
ffa7fe3062
gnu: r-nlme: Update to 3.1-131.1. 
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-131.1.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus
9800f7d9e8
gnu: r-bookdown: Update to 0.7. 
* gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.7.
[propagated-inputs]: Add r-tinytex.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus
4376166b03
gnu: Add r-metap. 
* gnu/packages/cran.scm (r-metap): New variable.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus
846f4c2303
gnu: Add r-tinytex. 
* gnu/packages/cran.scm (r-tinytex): New variable.
 2018-02-19 09:53:04 +01:00
Rutger Helling
a754c79013
gnu: youtube-dl: Update to 2018.02.11. 
* gnu/packages/video.scm (youtube-dl): Update to 2018.02.11.
 2018-02-19 09:22:47 +01:00
Rutger Helling
90e37ea088
gnu: retroarch: Update to 1.7.1. 
* gnu/packages/games.scm (retroarch): Update to 1.7.1.
 2018-02-19 08:12:59 +01:00
Tobias Geerinckx-Rice
77659ff3ad
gnu: iverilog: Use Texinfo in description. 
* gnu/packages/fpga.scm (iverilog)[description]: Substitute @command for
inverted commas.
 2018-02-19 06:00:33 +01:00
Tobias Geerinckx-Rice
c046904d74
gnu: iverilog: Update to 10.2. 
* gnu/packages/fpga.scm (iverilog): Update to 10.2.
 2018-02-19 06:00:32 +01:00
Tobias Geerinckx-Rice
05ee510272
gnu: nyacc: Update to 0.83.3. 
* gnu/packages/mes.scm (nyacc): Update to 0.83.3.
 2018-02-19 06:00:32 +01:00
Tobias Geerinckx-Rice
e51b3145ca
gnu: nasm: Update to 2.13.03. 
* gnu/packages/assembly.scm (nasm): Update to 2.13.03.
 2018-02-19 06:00:31 +01:00
Tobias Geerinckx-Rice
0bd8d6dc28
gnu: ccache: Update to 3.4.1. 
* gnu/packages/ccache.scm (ccache): Update to 3.4.1.
 2018-02-19 06:00:31 +01:00
Tobias Geerinckx-Rice
16cb3b8fe0
gnu: lsof: Run tests. 
* gnu/packages/lsof.scm (lsof)[arguments]: Remove untrue #:TESTS?.
Add ‘disable-failing-tests’ and ‘check’ phases to run them.
 2018-02-19 06:00:30 +01:00
Tobias Geerinckx-Rice
c2799070ca
gnu: lsof: Remove build timestamp. 
* gnu/packages/lsof.scm (lsof)[arguments]: Add ‘patch-timestamps’ phase.
 2018-02-19 06:00:30 +01:00
Tobias Geerinckx-Rice
b7fd3e96c7
gnu: lsof: Update phase style. 
* gnu/packages/lsof.scm (lsof)[arguments]: Substitute INVOKE for SYSTEM*
and end phases with #t.
 2018-02-19 06:00:29 +01:00
Tobias Geerinckx-Rice
57774ae150
gnu: lsof: Make perl a native input. 
* gnu/packages/lsof.scm (lsof)[inputs]: Move perl from here...
[native-inputs]: ...to here.
 2018-02-19 06:00:29 +01:00
Tobias Geerinckx-Rice
cb443e55dc
gnu: lsof: Factorise source URIs. 
* gnu/packages/lsof.scm (%ftp-base): Remove variable.
(lsof)[source]: Construct mirror URI list programatically.
 2018-02-19 06:00:28 +01:00
Tobias Geerinckx-Rice
5ae76e8f16
gnu: lsof: Replace dead mirror. 
* gnu/packages/lsof.scm (lsof)[source]: Replace sunsite.ualberta.ca with
mirrorservice.org, which offers both HTTP and FTP services.
 2018-02-19 06:00:27 +01:00
Tobias Geerinckx-Rice
7268563be5
gnu: dvdstyler: Update to 3.0.4. 
* gnu/packages/cdrom.scm (dvdstyler): Update to 3.0.4.
 2018-02-19 06:00:27 +01:00
Tobias Geerinckx-Rice
14eb54349a
gnu: perl-xml-sax: Update to 1.00. 
* gnu/packages/xml.scm (perl-xml-sax): Update to 1.00.
 2018-02-19 06:00:26 +01:00
Tobias Geerinckx-Rice
6208fcf742
gnu: perl-importer: Update to 0.025. 
* gnu/packages/perl.scm (perl-importer): Update to 0.025.
 2018-02-19 06:00:25 +01:00
Tobias Geerinckx-Rice
780fa70cd3
gnu: perl-params-validationcompiler: Update to 0.27. 
* gnu/packages/perl.scm (perl-params-validationcompiler): Update to 0.27.
[native-inputs]: Add perl-type-tiny for another test.
 2018-02-19 06:00:25 +01:00
Tobias Geerinckx-Rice
9c22b13136
gnu: xinetd: Don't hard-code tarball version. 
* gnu/packages/web.scm (xinetd)[source]: Construct URI using VERSION.
 2018-02-19 06:00:24 +01:00
Tobias Geerinckx-Rice
96d47129f6
gnu: ncftp: Update to 3.2.6. 
* gnu/packages/ftp.scm (ncftp): Update to 3.2.6.
[source]: Use .xz instead of (discontinued) .bz2 tarball.
 2018-02-19 06:00:23 +01:00
Tobias Geerinckx-Rice
9e7f1d103d
gnu: knot: Update to 2.6.5. 
* gnu/packages/dns.scm (knot): Update to 2.6.5.
 2018-02-19 05:57:19 +01:00
Tobias Geerinckx-Rice
331ebb7f94
gnu: awscli: Update to 1.14.41. 
* gnu/packages/python-web.scm (awscli): Update to 1.14.41.
 2018-02-19 05:57:19 +01:00
Tobias Geerinckx-Rice
659fef8ddb
gnu: libfilezilla: Update to 0.12.0. 
* gnu/packages/ftp.scm (libfilezilla): Update to 0.12.0.
 2018-02-19 05:57:18 +01:00
Tobias Geerinckx-Rice
eae7ece1af
gnu: erlang: Use HTTPS home page. 
* gnu/packages/erlang.scm (erlang)[home-page]: Use HTTPS with the new
canonical domain.
 2018-02-19 05:57:17 +01:00
okapi
2922852e86
gnu: Add gzdoom. 
* gnu/packages/games.scm (gzdoom): New variable.
* gnu/packages/patches/gzdoom-search-in-installed-share.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 00:33:34 +01:00
okapi
9073c8758c
gnu: Add fluid-3. 
* gnu/packages/audio.scm (fluid-3): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 00:33:34 +01:00
Ludovic Courtès
5912791655
gnu: guix: Update snapshot to bdf0c64. 
* gnu/packages/package-management.scm (guix): Update to bdf0c64.
[arguments] <copy-bootstrap-guile>: Move after 'check' phase.  Rewrite
to use "guix download" and to intern only one or two tarballs.
[inputs]: Remove "boot-guile/*".  Add "boot-guile" and, optionally,
"boot-guile/i686".
 2018-02-19 00:33:34 +01:00
Ludovic Courtès
37084ba561
services: avahi: Publish '_workstation._tcp' by default. 
This reverts to the behavior of avahi-daemon prior to Avahi 0.7 (commit
550f4509ac).

* gnu/services/avahi.scm (<avahi-configuration>)[publish-workstation?]:
New field.
(configuration-file): Honor it.
 2018-02-19 00:33:34 +01:00
Ludovic Courtès
ad7a807d84
services: avahi: Read PID file from /run. 
* gnu/services/avahi.scm (%avahi-activation, avahi-shepherd-service):
Use /run/avahi-daemon/ instead of /var/run/avahi-daemon/.  This was the
case since the switch to Avahi 0.7 (commit
550f4509ac).
 2018-02-19 00:33:34 +01:00
Marius Bakke
418cbf6e22
gnu: qt.scm: Remove unneeded import. 
* gnu/packages/qt.scm (define-module): Don't import (gnu packages base).
 2018-02-18 20:44:19 +01:00
Marius Bakke
5ce3f93bc5
gnu: Add xorgproto. 
* gnu/packages/xorg.scm (xorgproto): New public variable.
 2018-02-18 20:23:45 +01:00
Marius Bakke
1ac1872161
gnu: lvm2: Remove obsolete phase. 
* gnu/packages/linux.scm (lvm2)[arguments]: Remove MAKE-OBJECTS-WRITABLE-PHASE.
 2018-02-18 20:13:42 +01:00
Marius Bakke
c06bf6a3e2
gnu: argon2: Update to 20171227. 
* gnu/packages/password-utils.scm (argon2): Update to 20171227.
[arguments]: Add OPTTEST=1 to #:make-flags to prevent "-march=native".  Remove
custom install phase.  Add 'patch-Makefile' phase.
[license]: Add ASL2.0.
 2018-02-18 20:13:42 +01:00
Hartmut Goebel
102fc5bc29
gnu: Add qqc2-desktop-style. 
* gnu/packages/kde-frameworks.scm (qqc2-desktop-style): New
  variable.
 2018-02-18 19:21:41 +01:00
Hartmut Goebel
ac5f3988c4
gnu: knotifications: Add optional input "qtspeech". 
* gnu/pacakges/kde-frameworks.scm (knotifications)[inputs]: Add
  qtspeech.
 2018-02-18 19:21:40 +01:00
Hartmut Goebel
96e622f15d
gnu: ktextwidgets: Add optional input "qtspeech". 
* gnu/pacakges/kde-frameworks.scm (ktextwidgets)[inputs]: Add
  qtspeech.
 2018-02-18 19:21:40 +01:00
Hartmut Goebel
bb8d1b2a72
gnu: qca: Use mirror://kde scheme for source-url. 
* gnu/packages/kde.scm (qca)[source]: Use mirror://kde scheme.
 2018-02-18 19:21:39 +01:00