Maxim Cournoyer
4efbf56e53
gnu: tadbit: Update to 1.0.1.
...
* gnu/packages/bioinformatics.scm (tadbit): Update to 1.0.1.
[arguments]: Remove #:tests? and #:python arguments.
[phases]{fix-problems-with-setup.py}: Remove no longer needed steps.
{check}: Override phase.
[native-inputs]: Add glib and pkg-config.
[inputs]: Add python-future and python-h5py.
2020-11-24 02:20:32 -05:00
Maxim Cournoyer
e7e73f750f
gnu: imp: Migrate to Python 3.
...
* gnu/packages/bioinformatics.scm (imp)
[arguments]: Enable tests by removing the #:tests? argument.
Specify the arguments to pass to the ctest test running via the
#:configure-flags argument.
[inputs]: Add cgal and opencv. Remove python-2. Move swig to...
[native-inputs]: ...here. Add python-wrapper.
[propagated-inputs]: Replace python2-numpy, python2-scipy, python2-pandas,
python2-scikit-learn and python2-networkx by python-numpy, python-scipy,
python-pandas, python-scikit-learn and python-networkx, respectively.
2020-11-24 02:20:31 -05:00
Maxim Cournoyer
5458648302
gnu: cmake: Update to 3.19.0.
...
* gnu/packages/cmake.scm (cmake): Update to 3.19.0.
[source]: Modify inherited source to adjust the hash as well as the snippet so
that the "Utilities/cm3p" sub-directory is preserved.
[phases]{patch-bin-sh, check}: Temporarily overrides until the next rebuild
cycle.
2020-11-24 02:20:31 -05:00
Tanguy Le Carrour
ccfafebc7d
gnu: python-mamba: Update to 0.11.2.
...
* gnu/packages/python-xyz.scm (python-mamba): Update to 0.11.2.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2020-11-24 12:10:12 +05:30
Tanguy Le Carrour
3f8113bbbd
gnu: python-isbnlib: Update to 3.10.4.
...
* gnu/packages/python-xyz.scm (python-isbnlib): Update to 3.10.4.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2020-11-24 12:09:03 +05:30
Oleg Pykhalov
984124173b
doc: Fix a typo in WebSSH configuration documentation.
...
* doc/guix.texi (Networking Services): Fix a typo in webssh-configuration.
2020-11-24 07:43:43 +03:00
Vagrant Cascadian
2faef3cb6f
gnu: ghc-text-short: Fix spelling.
...
* gnu/packages/haskell-xyz (ghc-text-short): Fix spelling of
"similar".
2020-11-23 17:19:08 -08:00
Vagrant Cascadian
c3364c18fd
gnu: bsd-games: Fix spelling.
...
* gnu/packages/games (bsd-games)[description]: Fix spelling of
"chosen".
2020-11-23 17:19:06 -08:00
Vagrant Cascadian
ceadb470a5
gnu: emacs-frame-local: Fix typo.
...
* gnu/packages/emacs-xyz (emacs-frame-local)[description]: Fix grammar
of "This package".
2020-11-23 17:18:41 -08:00
Marius Bakke
689d88451e
gnu: ungoogled-chromium: Update to 87.0.4280.66-0.1f7cdef.
...
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 87.
(arch-patch, %arch-revision, %arch-patches): Remove.
(ungoogled-chromium-snippet): Remove %ARCH-PATCHES.
(%ungoogled-revision): Set to 1f7cdef6dfa8f612afde8f988131f210612333e0.
(%chromium-version): Set to 87.0.4280.66.
(ungoogled-chromium)[source]: Update hash.
[arguments]: Adjust #:configure-flags for changes in 87. Enable Pipewire
support in WebRTC.
[native-inputs]: Add WAYLAND.
[inputs]: Add PIPEWIRE and WAYLAND.
(ungoogled-chromium/wayland): Implement as a wrapper over UNGOOGLED-CHROMIUM.
* gnu/packages/patches/ungoogled-chromium-system-nspr.patch: Adjust for 87.
2020-11-23 23:37:34 +01:00
Ludovic Courtès
5859170209
Merge branch 'version-1.2.0'
2020-11-23 22:20:27 +01:00
Tobias Geerinckx-Rice
94147d672a
gnu: mujs: Omit static library.
...
* gnu/packages/javascript.scm (mujs)[arguments]: Replace the default
'install phase which would install (only) the static library.
2020-11-23 22:12:19 +01:00
Tobias Geerinckx-Rice
4a74499cd9
gnu: mujs: Cross-compile.
...
* gnu/packages/javascript.scm (mujs)[arguments]: Use CC-FOR-TARGET.
2020-11-23 22:12:19 +01:00
Tobias Geerinckx-Rice
f289d922b2
gnu: mujs: Update to 1.0.9.
...
* gnu/packages/javascript.scm (mujs): Update to 1.0.9.
2020-11-23 22:12:19 +01:00
Tobias Geerinckx-Rice
d3e6f41ad6
gnu: mujs: Fetch sources from git.
...
* gnu/packages/javascript.scm (mujs)[source]: GIT-FETCH the sources
directly from the author.
[arguments]: Add VERSION to #:make-flags.
2020-11-23 22:12:19 +01:00
Tobias Geerinckx-Rice
41c3f10b4c
gnu: gpodder: Update to 3.10.17.
...
* gnu/packages/gpodder.scm (gpodder): Update to 3.10.17.
2020-11-23 22:12:19 +01:00
Tobias Geerinckx-Rice
c569aae146
gnu: snd: Update to 20.9.
...
* gnu/packages/audio.scm (snd): Update to 20.9.
2020-11-23 22:12:19 +01:00
Tobias Geerinckx-Rice
cf341c39f7
gnu: libraqm: Update to 0.7.1.
...
* gnu/packages/fontutils.scm (libraqm): Update to 0.7.1.
2020-11-23 22:12:19 +01:00
Tobias Geerinckx-Rice
8cc6cd3429
gnu: djview: Update to 4.12.
...
* gnu/packages/djvu.scm (djview): Update to 4.12.
2020-11-23 22:12:18 +01:00
Tobias Geerinckx-Rice
9314d82518
gnu: mtpaint: Update to 3.49.33.
...
* gnu/packages/image.scm (mtpaint): Update to 3.49.33.
2020-11-23 22:12:18 +01:00
David Thompson
be4d9527b5
gnu: guile-chickadee: Use Guile 3.0.
...
* gnu/packages/game-development.scm (guile-chickadee): Change Guile inputs to
use 3.0 package variants.
2020-11-23 15:52:42 -05:00
Niklas Eklund
c758433302
gnu: Add emacs-undo-fu-session.
...
* gnu/packages/emacs-xyz.scm (emacs-undo-fu-session): New variable.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2020-11-24 00:36:00 +05:30
Niklas Eklund
b27b0e13b6
gnu: Add emacs-embark.
...
* gnu/packages/emacs-xyz.scm (emacs-embark): New variable.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2020-11-24 00:13:47 +05:30
Tobias Geerinckx-Rice
ba902a1598
gnu: eigen: Add upstream bugfix patch.
...
This fixes the build of nanopolish, imp, and others.
Reported by apteryx in #guix.
* gnu/packages/algebra.scm (eigen)[source]: Add patch.
* gnu/packages/patches/eigen-remove-openmp-error-counting.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-11-23 19:22:31 +01:00
Tobias Geerinckx-Rice
2d3c932073
gnu: parallel: Update to 20201122.
...
* gnu/packages/parallel.scm (parallel): Update to 20201122.
2020-11-23 19:22:30 +01:00
Niklas Eklund
ddfaae3136
gnu: Add emacs-orderless.
...
* gnu/packages/emacs-xyz.scm (emacs-orderless): New variable.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2020-11-23 23:49:40 +05:30
David Thompson
4411029777
gnu: guile-chickadee: Update to 0.6.0.
2020-11-23 12:57:15 -05:00
David Thompson
b4b15389b7
gnu: Deprecate guile3.0-chickadee.
2020-11-23 12:56:51 -05:00
Efraim Flashner
964bc9e5fe
gnu: Add cwltool.
...
* gnu/packages/bioinformatics.scm (cwltool): New variable.
2020-11-23 15:43:38 +02:00
Efraim Flashner
a78159547f
gnu: Add python-shellescape.
...
* gnu/packages/python-xyz.scm (python-shellescape): New variable.
2020-11-23 15:43:37 +02:00
Efraim Flashner
5c3d81802d
gnu: Add python-arcp.
...
* gnu/packages/python-xyz.scm (python-arcp): New variable.
2020-11-23 15:43:37 +02:00
Efraim Flashner
7face25953
gnu: Add python-schema-salad.
...
* gnu/packages/bioinformatics.scm (python-schema-salad): New variable.
2020-11-23 15:43:37 +02:00
Efraim Flashner
01b6864125
gnu: Add python-cachecontrol-0.11.
...
* gnu/packages/python-web.scm (python-cachecontrol-0.11): New variable.
2020-11-23 15:43:37 +02:00
Efraim Flashner
5a5f16ec42
gnu: Add python-prov.
...
* gnu/packages/python-xyz.scm (python-prov): New variable.
2020-11-23 15:43:37 +02:00
Efraim Flashner
f00165a736
gnu: Add python-bagit.
...
* gnu/packages/python-xyz.scm (python-bagit): New variable.
2020-11-23 15:43:36 +02:00
Efraim Flashner
f8be147411
gnu: python-pydot: Update home-page URI.
...
* gnu/packages/graphviz.scm (python-pydot)[home-page]: Update to new
home-page URI.
2020-11-23 15:43:36 +02:00
Efraim Flashner
b1aac582ca
gnu: python-pydot: Run tests.
...
* gnu/packges/graphviz.scm (python-pydot)[source]: Add patch.
[arguments]: Override check phase.
[native-inputs]: Add graphviz.
* gnu/packages/patches/python-pydot-regression-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2020-11-23 15:43:36 +02:00
Efraim Flashner
79f3e26184
gnu: python-pydot: Update to 1.4.1.
...
* gnu/packages/graphviz.scm (python-pydot): Update to 1.4.1.
2020-11-23 15:43:32 +02:00
Efraim Flashner
77b7d990ec
gnu: grub: Fix cross-compiling for other architectures.
...
Reported by cbaines and xelxebar on IRC.
* gnu/packages/bootloaders.scm (grub)[arguments]: In custom
'set-freetype-variables phase only use the native-inputs version of
freetype.
2020-11-23 15:43:32 +02:00
Mathieu Othacehe
d9e57db724
store: Fix ensure-path docstring.
...
Suggested by Ludovic Courtès.
* guix/store.scm (ensure-path): Fix the docstring.
2020-11-23 14:10:34 +01:00
Guillaume Le Vaillant
f14c6af5dc
gnu: Add djvusmooth.
...
* gnu/packages/djvu.scm (djvusmooth): New variable.
2020-11-23 13:28:19 +01:00
Guillaume Le Vaillant
72fbbca80d
gnu: Add python-djvulibre.
...
* gnu/packages/python-xyz.scm (python-djvulibre): New variable.
2020-11-23 13:28:18 +01:00
Pierre Neidhardt
add4749917
etc: snippets: Prefill Common Lisp package names.
...
* etc/snippets/text-mode/guix-commit-message-add-cl-package: New file.
2020-11-23 11:14:22 +01:00
Pierre Neidhardt
8307b8f184
etc: snippets: Fix package name extraction.
...
* etc/snippets/text-mode/guix-commit-message-add-package: Properly extract
name when the diff contains a very short `define-public ...` above the actual
new package. This can happen when the above package is a small inherited
definition or cl/ecl package.
2020-11-23 11:13:58 +01:00
Tobias Geerinckx-Rice
f942c09b66
gnu: lsof: Cross-compile.
...
* gnu/packages/lsof.scm (lsof)[arguments]: Use CC-FOR-TARGET.
2020-11-23 05:44:11 +01:00
Tobias Geerinckx-Rice
2bf502138c
gnu: lsof: Make test failures fatal.
...
* gnu/packages/lsof.scm (lsof)[source]: Add patch to make test suite
failures stop the build.
* gnu/packages/patches/lsof-fatal-test-failures.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-11-23 05:44:10 +01:00
Tobias Geerinckx-Rice
70303d073a
gnu: lsof: Respect #:tests?.
...
* gnu/packages/lsof.scm (lsof)[arguments]: The 'check phase takes and
respects a TESTS? keyword.
2020-11-23 05:44:10 +01:00
Tobias Geerinckx-Rice
518b21e058
gnu: lsof: Update to 4.94.0.
...
* gnu/packages/lsof.scm (lsof): Update to 4.94.0.
[source]: Switch to new git upstream.
[native-inputs]: Add groff.
[arguments]: Remove custom 'unpack phase. Add a 'build-man-page phase.
Remove the upstreamed glibc@2.28 test fix.
2020-11-23 05:44:10 +01:00
Tobias Geerinckx-Rice
83371ccddd
gnu: hdparm: Update to 9.60.
...
* gnu/packages/linux.scm (hdparm): Update to 9.60.
2020-11-23 05:44:10 +01:00
Tobias Geerinckx-Rice
096a6938c2
gnu: ipset: Update to 7.9.
...
* gnu/packages/linux.scm (ipset): Update to 7.9.
2020-11-23 05:44:10 +01:00