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Author SHA1 Message Date
Ricardo Wurmus 4ea4101d66
gnu: r-ggvenndiagram: Update to 1.4.9. 
* gnu/packages/cran.scm (r-ggvenndiagram): Update to 1.4.9.
[propagated-inputs]: Add r-aplot, r-forcats, and r-tidyr; remove r-magrittr,
r-plotly, r-purrr, r-rvenn, r-sf, and r-yulab-utils.

Change-Id: I7e1f701e893aff8d75fa9de46d4f451cfa98f820
 2024-01-01 14:35:13 +01:00
Ricardo Wurmus 2b08c05bff
gnu: r-diversitree: Update to 0.10-0. 
* gnu/packages/cran.scm (r-diversitree): Update to 0.10-0.
[native-inputs]: Remove gfortran.

Change-Id: Ie54ba8374d85b66d712d2c50d7ad1f05edc01b75
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus 8c7904e424
gnu: r-radiant-data: Update to 1.6.3. 
* gnu/packages/cran.scm (r-radiant-data): Update to 1.6.3.
[source]: Do not delete help files, because they are now under CC-BY-SA.
[arguments]: Simplify by using minify-build-system.

Change-Id: Ic4a2bdd3a8df9f27d703505eaeba080e28982c80
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus ffa5bec664
gnu: r-shiny: Update to 1.8.0. 
* gnu/packages/cran.scm (r-shiny): Update to 1.8.0.
[arguments]: Do not use quasiquote for argument list.

Change-Id: Id36b3168a13a254e26cda30d7eaa45874d40c4e3
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus 54c2ed9e2e
gnu: r-torch: Update to 0.12.0. 
* gnu/packages/cran.scm (r-torch): Update to 0.12.0.
[propagated-inputs]: Add r-jsonlite and r-safetensors.

Change-Id: I7d35b494640159975485846416e03630c7cd451f
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus 5a5a5cf31d
gnu: liblantern: Update to 0.11.0-1.4d83bd0. 
* gnu/packages/machine-learning.scm (liblantern): Update to 0.11.0-1.4d83bd0.

Change-Id: I04ac3d64df8ec3b4ba628886640020a24361f4e3
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus 1e5faccecd
gnu: python-pytorch-for-r-torch: Update to 2.0.1. 
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Update to 2.0.1.
* gnu/packages/patches/python-pytorch2-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Change-Id: I97551d543e50f6e511aa0529c097d156cf3f96de
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus 6055bb3163
gnu: Add onnx-optimizer-for-torch2. 
* gnu/packages/machine-learning.scm (onnx-optimizer-for-torch2): New variable.

Change-Id: Icf48cba3f0a30f171b6f01cd033dd135a078ba1a
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus 43c92f323e
gnu: Add onnx-for-torch2. 
* gnu/packages/machine-learning.scm (onnx-for-torch2): New variable.
* gnu/packages/patches/onnx-1.13.1-use-system-googletest.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Change-Id: I8a46b9a8096a33bcf949bc4f5d497e22902ab301
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus 7720430678
gnu: python-protobuf: Update to 3.20.2. 
* gnu/packages/protobuf.scm (python-protobuf): Update to 3.20.2.

Change-Id: Ic7a0f199f522ebf1e62e9179b4a7e4223594299c
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus 745edcc4c0
gnu: Add r-safetensors. 
* gnu/packages/cran.scm (r-safetensors): New variable.

Change-Id: I40bcee87cdbba9776f3448a2567f94ebb1e652b9
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus 5654f61541
gnu: Add xnnpack-for-torch2. 
* gnu/packages/machine-learning.scm (xnnpack-for-torch2): New variable.
* gnu/packages/patches/xnnpack-for-torch2-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Change-Id: I1c35f5fbd064fcc6732b924d7cafaa1a7d03ce04
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus 71b8ed4a28
gnu: r-rmpi: Update to 0.7-2. 
* gnu/packages/cran.scm (r-rmpi): Update to 0.7-2.
[properties]: Specify updater-extra-inputs.
[arguments]: Use G-expression.

Change-Id: Ic15015bf181ae1e7689b7c81a3bf11258e2df946
 2024-01-01 14:35:12 +01:00
Ricardo Wurmus 4ee04aa632
gnu: r-littler: Update to 0.3.19. 
* gnu/packages/cran.scm (r-littler): Update to 0.3.19.
[properties]: Specify updater-extra-inputs.
[native-inputs]: Remove pkg-config.

Change-Id: Ic152e560fa9f5609aebc8c4a68a60265b7626bcb
 2024-01-01 14:35:12 +01:00
Julien Lepiller 9bfb7db8f6
gnu. josm. Update to 18907. 
* gnu/packages/geo.scm (josm): Update to 18907.

Change-Id: Ica61eabb49489bc5716b2b0bd029bbffcb7f84d3
 2024-01-01 10:37:03 +01:00
Julien Lepiller 8ba7a4a042
gnu: Add java-jakarta-annotations-api. 
* gnu/packages/java.scm (java-jakarta-annotations-api): New variable.

Change-Id: I374d1be6f1c509c9c6391e0551de5362eae13357
 2024-01-01 10:36:51 +01:00
Jean-Pierre De Jesus DIAZ 3bb1390171
gnu: Add neovim-coqtail. 
* gnu/packages/vim.scm (neovim-coqtail): New variable.

Change-Id: I431571925da02788410fc8bf3b1e1aea93bcb1bb
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2024-01-01 10:51:06 +02:00
Jean-Pierre De Jesus DIAZ 6abff4eafa
gnu: vim-coqtail: Allow using neovim for tests. 
* gnu/packages/vim.scm (vim-coqtail): Allow using neovim for tests.

Change-Id: I114b07dd9cf525a5571a37f51b2e6b2a57d5be46
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2024-01-01 10:49:17 +02:00
Jean-Pierre De Jesus DIAZ cb651129a3
gnu: vim-coqtail: Move vim-full to arguments. 
* gnu/packages/vim.scm (vim-coqtail)[arguments]: Set #:vim to use
vim-full.  Adjust custom 'check phase accordingly.
[native-inputs]: Remove vim-full.  Remove input labels.

Change-Id: I20cc1e0772727f8fc7db70b42151432fb6349fc7
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2024-01-01 10:46:44 +02:00
Jean-Pierre De Jesus DIAZ b34d0ceb85
gnu: Add neovim-vader. 
* gnu/packages/vim.scm (neovim-vader): New variable.

Change-Id: Ib507c2086c31a42088f3f433b57ac1e345e27113
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2024-01-01 10:45:51 +02:00
Jean-Pierre De Jesus DIAZ def924439d
gnu: vim-vader: Allow using neovim for tests. 
* gnu/packages/vim.scm (vim-vader): Allow using neovim for tests.

Change-Id: Id5b4423f24fdd42814b0a0e3fab801ec871611f7
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2024-01-01 10:44:20 +02:00
Efraim Flashner b20b624b02
gnu: gccgo-12: Fix building with 1 core. 
* gnu/packages/gcc.scm (make-gccgo)[arguments]: When building gccgo-12
or higher add a phase to build libbacktrace before libgo.

Change-Id: I9bb225b58ffa439f9461e4126f51ab453683efbe
 2024-01-01 08:35:53 +02:00
Florian Pelz 86b5fa1009
nls: Update translations. 
Change-Id: Ib407fd37896cc8653f5bfb1f76dba9dc775c8c10
 2024-01-01 00:45:47 +01:00
John Kehayias 19f5302d13
gnu: go-1.21: Update to 1.21.5. 
* gnu/packages/golang.scm (go-1.21): Update to 1.21.5.

Change-Id: Ie7d275e698c3884c93d7618d99859d6019fa8893
 2023-12-31 15:37:16 -05:00
John Kehayias c314115dd0
gnu: Add the Go standard library 1.21. 
* gnu/packages/golang.scm (go-std-1.21): New variable.

Co-authored-by: VÖRÖSKŐI András <voroskoi@gmail.com>
Change-Id: I8f26611fc5a9398d915e74d3e55a0f0310b27133
 2023-12-31 15:35:17 -05:00
Katherine Cox-Buday 37c33eb0d4
gnu: Add go-1.21. 
* gnu/packages/golang.scm (go-1.21): New variable.

Signed-off-by: John Kehayias <john.kehayias@protonmail.com>
Change-Id: Ifa9fa61ed1ae49831621bdbabd530d29f6fa164a
 2023-12-31 15:24:18 -05:00
Timotej Lazar 1709f1bc92
gnu: jq: Update to 1.7.1 [security fixes]. 
Fixes CVE-2023-50246 and CVE-2023-50268.

* gnu/packages/web.scm (jq): Update to 1.7.1.

Change-Id: I21999732036c76faea711e0484fa8c0d75d8736f
Signed-off-by: John Kehayias <john.kehayias@protonmail.com>
 2023-12-31 15:10:27 -05:00
Efraim Flashner b7466215cd
gnu: go-github-com-stretchr-testify-bootstrap: Move to golang-check.scm 
* gnu/packages/golang.scm (go-github-com-stretchr-testify-bootstrap):
Move from here ...
* gnu/packages/golang-check.scm: ... to here.

Change-Id: Iaa32e1c17a0e5a372613302e5e7fbf8de4d9572a
 2023-12-31 14:38:44 +02:00
Kaelyn Takata 94b5db7bbc
gnu: Remove dxvk. 
This package has been broken for some time, and upstream removed support for
building with winelib in version 1.7 released in May 2020.

* gnu/packages/wine.scm (dxvk): Delete variable.

Change-Id: I393853aa6e0c9257907549f346a36a1fe37a61a0
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2023-12-31 12:31:18 +01:00
Kaelyn Takata 7330b71256
gnu: wine-staging: Update to 8.18. 
* gnu/packages/wine.scm (wine-staging): Update to 8.18.
(wine-staging-patchset-data)[#:builder]: Adjust accordingly.
[native-inputs]: Drop bash.
(wine-staging)[native-inputs]: Add python-3.
[#:phases]<apply-wine-staging-patches>: Adjust path to patch script.
(wine64-staging)[#:phases]<apply-wine-staging-patches>: Likewise.

Change-Id: Ie71ed785c1e821b1d1752e46b3da11809b4331e5
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2023-12-31 12:31:18 +01:00
Adam Faiz a98b4abe76
gnu: Add devours. 
* gnu/packages/games.scm (devours): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2023-12-31 12:31:18 +01:00
Adam Faiz c95ad4e38d
gnu: Add informlib. 
* gnu/packages/game-development.scm (informlib): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2023-12-31 12:31:18 +01:00
Adam Faiz c3d8a7242a
gnu: Add inform. 
* gnu/packages/game-development.scm (inform): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2023-12-31 12:31:17 +01:00
Jonathan Brielmaier 1185b14a29
doc: cookbook: Fix typo. 
Follow-up: f24b14767d

* doc/guix-cookbook.texi (Routed network for libvirt): Fix typo in
section name.

Change-Id: I1ba7ee2cba89764283f6a702a793ee9100585a87
 2023-12-31 11:41:16 +01:00
Maxim Cournoyer 2a242e8637
gnu: Remove emacs-mu4e-conversation. 
* gnu/packages/emacs-xyz.scm (emacs-mu4e-conversation): Delete variable.

Reported-by: Cayetano Santos <csantosb@inventati.org>
Change-Id: I45126ecabdfc475e5cd19a342c78e7e98e91fe54
 2023-12-31 01:01:41 -05:00
Florian Pelz f0752de257
doc: Use accurate wording in Emacs-Debbugs configuration. 
'M-x debbugs-gnu' does not prompt for which bugs to show.
'C-u M-x debbugs-gnu' would.
Follow-up to 19fe24c5b9.

* doc/contributing.texi (Viewing Bugs within Emacs): Make comment
more accurate.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-12-31 01:01:40 -05:00
Hilton Chain 9d148d08be
gnu: font-lxgw-wenkai: Update to 1.315. 
* gnu/packages/fonts.scm (font-lxgw-wenkai): Update to 1.315.

Change-Id: I28d0526af7868a50a378fcbd5bd2d11d27b02aa1
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2023-12-31 11:05:38 +08:00
Vagrant Cascadian 111d010921
gnu: diffoscope: Update to 253. 
* gnu/packages/diffoscope.scm (diffoscope): Update to 253.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
Change-Id: I70d0130c8cc3cdea03546969a0e87eb4c637fc5b
 2023-12-31 11:05:38 +08:00
Greg Hogan f36bcd14c6
gnu: shflags: Update to 1.3.0. 
* gnu/packages/version-control.scm (shflags): Update to 1.3.0.

Change-Id: I8463a45d4a2526d971441292e7ec94c9e0710521
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2023-12-31 11:05:38 +08:00
Bruno Victal 7310d4fcc3
gnu: mympd: Update to 13.0.6. 
* gnu/packages/mpd.scm (mympd): Update to 13.0.6.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
Change-Id: Iaaf3985ce4c1399bb0709f2e6702df2a232a1e48
 2023-12-31 11:05:38 +08:00
Kaelyn Takata 976fe648df
gnu: glfw: Update to 3.3.9. 
* gnu/packages/gl.scm (glfw): Update to 3.3.9.

Change-Id: Ide5ec168e97d431dba007bd6095635dab83b87c4
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2023-12-31 11:05:38 +08:00
Julien Lepiller b8aea26c4f
gnu: Remove ocaml-markup0.8.0. 
This is only used for ocaml4.07.

* gnu/packages/ocaml.scm (ocaml-markup0.8.0): Remove variable.
(ocaml-markup)[properties]: Remove variant.

Change-Id: Ib6444d67f5b8fba13e8ca7bca444ed9e29efa7de
 2023-12-30 22:14:45 +01:00
Julien Lepiller 4a7b588923
gnu: Remove ocaml4.07-sexplib0. 
* gnu/packages/ocaml.scm (ocaml4.07-sexplib0): Remove variable.
(ocaml-sexplib0)[properties]: Remove variant.

Change-Id: Ie370668adc446fc4c2b04206a6657380e5e09790
 2023-12-30 22:13:57 +01:00
Julien Lepiller e22e54aa04
gnu: Remove ocaml4.07-lwt. 
* gnu/packages/ocaml.scm (ocaml4.07-lwt): Remove variable.
(ocaml-lwt)[properties]: Remove variant.

Change-Id: I3db8b1656ead127a9081d843a3ad387706bcc982
 2023-12-30 22:13:52 +01:00
Julien Lepiller b1b2eb4040
gnu: Remove ocaml4.07-base. 
* gnu/packages/ocaml.scm (ocaml4.07-base): Remove variable.
(ocaml-base)[properties]: Remove variant.

Change-Id: I07813a2865b3bb42e0adf75e74bfebe372f1e789
 2023-12-30 22:13:48 +01:00
Julien Lepiller cad3698635
gnu: Remove ocaml4.07-stdio. 
* gnu/packages/ocaml.scm (ocaml4.07-stdio): Remove variable.
(ocaml-stdio)[properties]: Remove variant.

Change-Id: I5a664b5130408eba41266f36cfc03641e2a8fd9d
 2023-12-30 22:13:42 +01:00
Julien Lepiller 0806c87cb2
gnu: Remove ocaml4.07-re. 
* gnu/packages/ocaml.scm (ocaml4.07-re): Remove variable.
(ocaml-re)[properties]: Remove variant.

Change-Id: Ib3cf5188737579908e945bd49617b6d717da4250
 2023-12-30 22:12:55 +01:00
Julien Lepiller aca25d415b
gnu: Remove ocaml4.07-compiler-libs. 
* gnu/packages/ocaml.scm (ocaml4.07-compiler-libs): Remove variable.
(ocaml-compiler-libs)[properties]: Remove variant.

Change-Id: Idf54330537c2ff9317a4650df06ece7bd980b1da
 2023-12-30 22:12:52 +01:00
Julien Lepiller 29a82bf5fc
gnu: Remove ocaml4.07-cmdliner. 
* gnu/packages/ocaml.scm (ocaml4.07-cmdliner): Remove variable.
(ocaml-cmdliner)[properties]: Remove variant.

Change-Id: I83cd2ca87356a103201b3c1ffb1a8de4b081a9da
 2023-12-30 22:12:47 +01:00
Julien Lepiller 3936d07da2
gnu: Remove ocaml4.07-lablgtk. 
* gnu/packages/ocaml.scm (ocaml4.07-lablgtk): Remove variable.
(lablgtk)[properties]: Remove variant.

Change-Id: I931b9316834d109fe291dbb8d1217690e129b9ee
 2023-12-30 22:12:44 +01:00