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Author SHA1 Message Date
Tobias Geerinckx-Rice 428a3621d5
gnu: nginx: Update to 1.19.2. 
* gnu/packages/web.scm (nginx): Update to 1.19.2.
 2020-08-13 00:17:23 +02:00
Tobias Geerinckx-Rice 7e8458aae3
gnu: nginx-documentation: Update to 1.19.2-2581-324ca14c3003. 
* gnu/packages/web.scm (nginx-documentation): Update to 1.19.2-2581-324ca14c3003.
 2020-08-13 00:17:23 +02:00
Tobias Geerinckx-Rice 525ed49563
gnu: perl-catalyst-view-tt: Update to 0.45. 
* gnu/packages/web.scm (perl-catalyst-view-tt): Update to 0.45.
 2020-08-13 00:17:22 +02:00
Tobias Geerinckx-Rice 3f0d94552f
gnu: luakit: Update to 2.2. 
* gnu/packages/web-browsers.scm (luakit): Update to 2.2.
 2020-08-13 00:17:22 +02:00
Tobias Geerinckx-Rice 336b6d3cfb
gnu: bspwm: Update to 0.9.10. 
* gnu/packages/wm.scm (bspwm): Update to 0.9.10.
 2020-08-13 00:17:22 +02:00
Ricardo Wurmus 638ef1e81d
gnu: conda: Update to 4.8.3. 
* gnu/packages/package-management.scm (python-conda): Define as deprecated
alias for conda.
(python2-conda): Remove variable.
(conda)[arguments]: Add phases "fix-permissions",
"correct-python-executable-name", "do-not-use-python-root-as-prefix", and
"init"; remove phase "remove-failing-tests"; update "check" phase.
[inputs]: Add python-wrapper.
[native-inputs]: Move them all to...
[propagated-inputs]: ...this field.  Add python-conda-package-handling,
python-tqdm, and zstd.
[description]: Remove line about Conda as a library.
 2020-08-13 00:00:54 +02:00
Ricardo Wurmus c9ec3c0763
gnu: python-pycosat: Update to 0.6.3. 
* gnu/packages/python-xyz.scm (python-pycosat): Update to 0.6.3.
 2020-08-12 23:35:08 +02:00
Ricardo Wurmus bcdc61bfa1
gnu: tophat: Hide default GCC. 
* gnu/packages/bioinformatics.scm (tophat)[arguments]: Add build phase
"hide-default-gcc".
 2020-08-12 21:55:06 +02:00
Ricardo Wurmus c9a1672841
gnu: Add python-conda-package-handling. 
* gnu/packages/package-management.scm (python-conda-package-handling): New
variable.
 2020-08-12 21:50:42 +02:00
Ricardo Wurmus 73092df468
gnu: libgtextutils: Hide default GCC. 
* gnu/packages/textutils.scm (libgtextutils)[arguments]: Add phase
hide-default-gcc.
 2020-08-12 21:26:40 +02:00
Nicolas Goaziou 2b16dbc3da
gnu: musescore: Update to 3.5. 
* gnu/packages/music.scm (musescore): Update to 3.5.
[origin]: Remove unused google_analytics library.
 2020-08-12 18:51:06 +02:00
Morgan Smith df403985ed
gnu: Add emacs-explain-pause-mode. 
* gnu/packages/emacs-xyz.scm (emacs-explain-pause-mode): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2020-08-12 19:47:38 +03:00
Nicolas Goaziou 9856346be4
gnu: emacs-org-superstar: Update to 1.3.0. 
* gnu/packages/emacs-xyz.scm (emacs-org-superstar): Update to 1.3.0.
 2020-08-12 17:41:56 +02:00
Morgan Smith 5d15d44987
gnu: Add emacs-kana. 
* gnu/packages/emacs-xyz.scm (emacs-kana): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-08-12 17:35:21 +02:00
Morgan Smith ed0b773ff6
gnu: Add emacs-kanji. 
* gnu/packages/emacs-xyz.scm (emacs-kanji): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-08-12 17:22:50 +02:00
Jesse Gibbons 8677e8699a
gnu: freedink-engine: Fix SDL hints. 
* gnu/packages/games.scm: freedink: [patches]: Add fix.
* gnu/packages/patches/freedink-engine-fix-sdl-hints.patch: New file.
* gnu/local.mk: Add it.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-08-12 17:08:47 +02:00
Jesse Gibbons e7e69e56f5
gnu: freedink-engine: Call autoreconf. 
* gnu/packages/games.scm: freedink-engine (phases): add 'autoreconf

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-08-12 17:08:40 +02:00
Tobias Geerinckx-Rice e77989bdcb
gnu: dovecot: Update to 2.3.11.3 [security fixes]. 
Fixes CVE-2020-12100, CVE-2020-12673, CVE-2020-10967, and CVE-2020-12674.

* gnu/packages/mail.scm (dovecot): Update to 2.3.11.3.
 2020-08-12 15:28:17 +02:00
Ricardo Wurmus 1c831f42cf
gnu: r-car: Update to 3.0-9. 
* gnu/packages/statistics.scm (r-car): Update to 3.0-9.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus d7570fc79b
gnu: r-fit-models: Update to 0.64. 
* gnu/packages/statistics.scm (r-fit-models): Update to 0.64.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus 15d4f9e109
gnu: r-rrcov: Update to 1.5-5. 
* gnu/packages/statistics.scm (r-rrcov): Update to 1.5-5.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus 6cb15e098c
gnu: r-hmisc: Update to 4.4-1. 
* gnu/packages/statistics.scm (r-hmisc): Update to 4.4-1.
[propagated-inputs]: Remove r-acepack.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus 1713df8e9a
gnu: r-tidyr: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-tidyr): Update to 1.1.1.
[propagated-inputs]: Remove r-rcpp and r-stringi; add r-cpp11.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus 06576a5bd0
gnu: r-dt: Update to 0.15. 
* gnu/packages/statistics.scm (r-dt): Update to 0.15.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus 47b57ce5dc
gnu: r-xml: Update to 3.99-0.5. 
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.5.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus 228a197278
gnu: r-rcpparmadillo: Update to 0.9.900.2.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.900.2.0.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus 210ae7ba60
gnu: r-devtools: Update to 2.3.1. 
* gnu/packages/statistics.scm (r-devtools): Update to 2.3.1.
[propagated-inputs]: Remove r-crayon, r-digest, r-glue, and r-git2r.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus c2b02b1b49
gnu: r-httr: Update to 1.4.2. 
* gnu/packages/statistics.scm (r-httr): Update to 1.4.2.
[native-inputs]: Add r-knitr.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus 81cc043322
gnu: r-data-table: Update to 1.13.0. 
* gnu/packages/statistics.scm (r-data-table): Update to 1.13.0.
[native-inputs]: Add r-knitr.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus 4a791a2f6d
gnu: r-dplyr: Update to 1.0.1. 
* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.1.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus b4552eba89
gnu: r-ggdendro: Update to 0.1.21. 
* gnu/packages/statistics.scm (r-ggdendro): Update to 0.1.21.
[propagated-inputs]: Remove r-knitr.
[native-inputs]: Add r-knitr.
 2020-08-12 13:57:15 +02:00
Ricardo Wurmus 284caaf505
gnu: r-bit64: Update to 4.0.2. 
* gnu/packages/statistics.scm (r-bit64): Update to 4.0.2.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus d9dc684dce
gnu: r-bit: Update to 4.0.4. 
* gnu/packages/statistics.scm (r-bit): Update to 4.0.4.
[native-inputs]: Add r-knitr.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus 4ebeb5329b
gnu: r-brms: Update to 2.13.5. 
* gnu/packages/cran.scm (r-brms): Update to 2.13.5.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus b65959fa72
gnu: r-rxnat: Update to 1.0.12. 
* gnu/packages/cran.scm (r-rxnat): Update to 1.0.12.
[propagated-inputs]: Add r-dplyr.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus c8ccc115a4
gnu: r-aws: Update to 2.4-3. 
* gnu/packages/cran.scm (r-aws): Update to 2.4-3.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus 8754e5b761
gnu: r-rstanarm: Update to 2.21.1. 
* gnu/packages/cran.scm (r-rstanarm): Update to 2.21.1.
[native-inputs]: Add r-knitr.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus ad53122f35
gnu: r-rstan: Update to 2.21.2. 
* gnu/packages/cran.scm (r-rstan): Update to 2.21.2.
[propagated-inputs]: Add r-withr.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus f74941f7d9
gnu: r-quanteda: Update to 2.1.1. 
* gnu/packages/cran.scm (r-quanteda): Update to 2.1.1.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus 7094d92aaa
gnu: r-shinycssloaders: Update to 1.0.0. 
* gnu/packages/cran.scm (r-shinycssloaders): Update to 1.0.0.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus d222c7527d
gnu: r-adamethods: Update to 1.2.1. 
* gnu/packages/cran.scm (r-adamethods): Update to 1.2.1.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus ac6ce7bb52
gnu: r-fda: Update to 5.1.5.1. 
* gnu/packages/cran.scm (r-fda): Update to 5.1.5.1.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus eaa1cc3bb6
gnu: r-rgdal: Update to 1.5-16. 
* gnu/packages/cran.scm (r-rgdal): Update to 1.5-16.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus 1f5bc20aca
gnu: r-parameters: Update to 0.8.2. 
* gnu/packages/cran.scm (r-parameters): Update to 0.8.2.
 2020-08-12 13:57:14 +02:00
Ricardo Wurmus 3ea13fd105
gnu: r-dalex: Update to 1.3.1.1. 
* gnu/packages/cran.scm (r-dalex): Update to 1.3.1.1.
 2020-08-12 13:57:13 +02:00
Ricardo Wurmus 606dd761ac
gnu: r-ibreakdown: Update to 1.3.1. 
* gnu/packages/cran.scm (r-ibreakdown): Update to 1.3.1.
 2020-08-12 13:57:13 +02:00
Ricardo Wurmus a2989498a7
gnu: r-ingredients: Update to 1.3.1. 
* gnu/packages/cran.scm (r-ingredients): Update to 1.3.1.
 2020-08-12 13:57:13 +02:00
Ricardo Wurmus 30b1b051e6
gnu: r-gbm: Update to 2.1.8. 
* gnu/packages/cran.scm (r-gbm): Update to 2.1.8.
[propagated-inputs]: Remove r-gridextra.
[native-inputs]: Add r-knitr.
 2020-08-12 13:57:13 +02:00
Ricardo Wurmus fb883e0dfe
gnu: r-hierfstat: Update to 0.5-7. 
* gnu/packages/cran.scm (r-hierfstat): Update to 0.5-7.
[propagated-inputs]: Add r-gaston.
[native-inputs]: Add r-knitr.
 2020-08-12 13:57:13 +02:00
Ricardo Wurmus 42fdd90252
gnu: r-ibdreg: Update to 0.3.1. 
* gnu/packages/cran.scm (r-ibdreg): Update to 0.3.1.
 2020-08-12 13:57:13 +02:00