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51072 commits

Author SHA1 Message Date
Ricardo Wurmus 3356eb511c
gnu: r-sjplot: Update to 2.8.0.
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.0.
[propagated-inputs]: Remove r-broom and r-nlme; add r-effectsize and
r-parameters.
2019-11-25 14:05:38 +01:00
Ricardo Wurmus 10faf81097
gnu: r-tidyverse: Update to 1.3.0.
* gnu/packages/cran.scm (r-tidyverse): Update to 1.3.0.
[propagated-inputs]: Add r-pillar.
2019-11-25 14:05:38 +01:00
Ricardo Wurmus eb6aad884f
gnu: r-parameters: Update to 0.3.0.
* gnu/packages/cran.scm (r-parameters): Update to 0.3.0.
2019-11-25 14:05:38 +01:00
Ricardo Wurmus a6828e0bf5
gnu: r-abn: Update to 2.2.
* gnu/packages/cran.scm (r-abn): Update to 2.2.
2019-11-25 14:05:38 +01:00
Ricardo Wurmus f94705d606
gnu: r-limsolve: Update to 1.5.6.
* gnu/packages/cran.scm (r-limsolve): Update to 1.5.6.
2019-11-25 14:05:38 +01:00
Ricardo Wurmus 3b2c3878f5
gnu: r-prodlim: Update to 2019.11.13.
* gnu/packages/cran.scm (r-prodlim): Update to 2019.11.13.
2019-11-25 14:05:38 +01:00
Ricardo Wurmus 3d391d2df4
gnu: r-webshot: Update to 0.5.2.
* gnu/packages/cran.scm (r-webshot): Update to 0.5.2.
2019-11-25 14:05:38 +01:00
Ricardo Wurmus 2cef54c060
gnu: r-insight: Update to 0.7.0.
* gnu/packages/cran.scm (r-insight): Update to 0.7.0.
2019-11-25 14:05:38 +01:00
Ricardo Wurmus 24edd279e4
gnu: Add r-effectsize.
* gnu/packages/cran.scm (r-effectsize): New variable.
2019-11-25 14:05:38 +01:00
Ricardo Wurmus 7b4b1136cc
gnu: r-rcppeigen: Update to 0.3.3.7.0.
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.7.0.
2019-11-25 14:05:38 +01:00
Ricardo Wurmus 55bb00b198
gnu: r-rlang: Update to 0.4.2.
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.2.
2019-11-25 14:05:37 +01:00
Ricardo Wurmus 0dc62774e1
gnu: r-digest: Update to 0.6.23.
* gnu/packages/statistics.scm (r-digest): Update to 0.6.23.
2019-11-25 14:05:37 +01:00
Ricardo Wurmus 5b720c15d1
gnu: r-pheatmap: Move to (gnu packages cran).
* gnu/packages/statistics.scm (r-pheatmap): Move from here...
* gnu/packages/cran.scm (r-pheatmap): ...to here.
2019-11-25 14:05:37 +01:00
Ricardo Wurmus 54a8cb963d
gnu: r-scales: Update to 1.1.0.
* gnu/packages/cran.scm (r-scales): Update to 1.1.0.
[propagated-inputs]: Remove r-rcpp; add r-farver and r-lifecycle.
2019-11-25 14:05:37 +01:00
Ricardo Wurmus 46130b7bee
gnu: r-scales: Move to (gnu packages cran).
* gnu/packages/statistics.scm (r-scales): Move variable from here...
* gnu/packages/cran.scm (r-scales): ...to here.
2019-11-25 14:05:32 +01:00
Efraim Flashner aca2bf51b7
gnu: sdsl-lite: Don't use bundled libraries.
* gnu/packages/datastructures.scm (sdsl-lite)[source]: Remove bundled
libraries in a snippet. Add patch to link to external libraries.
[arguments]: Add phase to install static library.
[native-inputs]: Add libdivsufsort.
2019-11-25 14:08:32 +02:00
Efraim Flashner 2b04bb3b4e
gnu: sdsl-lite: Remove unused inputs.
Documentation also wants graphviz, which drastically increases
'guiz size sdsl-lite'.

* gnu/packages/datastructures.scm (sdsl-lite)[native-inputs]: Remove
doxygen.
2019-11-25 14:08:32 +02:00
Efraim Flashner 3546771cc8
gnu: libdivsufsort: Move to datastructures.scm.
* gnu/packages/bioinformatics.scm (libdivsufsort): Move to ...
* gnu/packages/datastructures.scm: ... here.
2019-11-25 14:08:32 +02:00
Efraim Flashner 31872b3e75
gnu: Add boost-static.
* gnu/packages/boost.scm (boost-static): New variable.
2019-11-25 14:08:31 +02:00
Efraim Flashner 775373b872
gnu: coq-bignums: Don't use unstable tarball.
* gnu/pacakges/coq.scm (coq-bignums)[source]: Download using git-fetch.
2019-11-25 14:08:31 +02:00
Efraim Flashner 8b1fd3cafd
gnu: bioperl-minimal: Don't use unstable tarball.
* gnu/packages/bioinformatics.scm (bioperl-minimal)[source]: Download
using git-fetch.
2019-11-25 14:08:31 +02:00
Efraim Flashner 46b0136e09
gnu: innoextract: Update to 1.8.
* gnu/packages/compression.scm (innoextract): Update to 1.8.
2019-11-25 14:08:31 +02:00
Efraim Flashner ff9838640c
gnu: innoextract: Don't use unstable tarball.
* gnu/packages/compression.scm (innoextract)[source]: Download the
release tarball.
2019-11-25 14:08:31 +02:00
Efraim Flashner 298180cdb2
gnu: unshield: Don't use unstable tarball.
* gnu/packages/compression.scm (unshield)[source]: Download using
git-fetch.
2019-11-25 14:08:30 +02:00
Efraim Flashner 898ac8e732
gnu: snappy: Don't use unstable tarball.
* gnu/packages/compression.scm (snappy)[source]: Download using
git-fetch.
2019-11-25 14:08:30 +02:00
Efraim Flashner d40362f425
gnu: sfarklib: Don't use unstable tarball.
* gnu/packages/compression.scm (sfarklib)[source]: Download using
git-fetch.
2019-11-25 14:08:30 +02:00
Efraim Flashner 609ba8d116
gnu: cinnamon-desktop: Don't use unstable tarball.
* gnu/packages/cinnamon.scm (cinnamon-desktop)[source]: Download using
git-fetch.
2019-11-25 14:08:30 +02:00
Efraim Flashner fea30e12f7
gnu: sparsehash: Don't use unstable tarball.
* gnu/packages/datastructures.scm (sparsehash)[source]: Download using
git-fetch.
2019-11-25 14:08:30 +02:00
Efraim Flashner e56d02a0e0
gnu: imlib2: Sort inputs alphabetically.
* gnu/packages/image.scm (imlib2)[inputs]: Sort alphabetically.
2019-11-25 14:08:29 +02:00
Efraim Flashner 115ace6ba5
gnu: imlib2: Update to 1.6.0.
* gnu/packages/image.scm (imlib2): Update to 1.6.0.
[inputs]: Add libwebp, libid3tag.
2019-11-25 14:08:29 +02:00
Efraim Flashner 2f6500faa4
gnu: gnunet-gtk: Sort inputs alphabetically.
* gnu/packages/gnunet.scm (gnunet-gtk)[inputs]: Sort alphabetically.
2019-11-25 14:08:29 +02:00
Efraim Flashner dbdd77074a
gnu: gnunet-gtk: Update to 0.11.7.
* gnu/packages/gnunet.scm (gnunet-gtk): Update to 0.11.7.
[version]: Don't inherit version from gnutls.
[inputs]: Add gnutls/dane.
2019-11-25 14:08:29 +02:00
Efraim Flashner edce19938a
gnu: gnunet: Update to 0.11.8.
* gnu/packages/gnunet.scm: Update to 0.11.8.
[inputs]: Add libidn2, miniupnpc, zbar. Remove glib, gmp,
gst-plugins-base, libidn, nss, openssl, perl, python-2.
[native-inputs]: Add python, xxd, which.
[arguments]: Remove configure-flags. Add phase to remove network
dependent tests. Re-arrange location of new 'check phase.
2019-11-25 14:08:29 +02:00
Efraim Flashner baac9ff97c
gnu: gnunet-gtk: Set upstream ftp-directory.
* gnu/packages/gnunet.scm (gnunet-gtk)[properties]: New field. Set
ftp-directory.
2019-11-25 14:08:26 +02:00
Tobias Geerinckx-Rice 8e77da0d11
gnu: bambam: Update to 1.0.0.
* gnu/packages/games.scm (bambam): Update to 1.0.0.
[arguments]: Use default Python (3).
Delete obsolete ‘patch-data-dir-location’ phase.
2019-11-24 13:32:58 +01:00
Tobias Geerinckx-Rice 9b0dae2222
gnu: perl-test-simple: Update to 1.302169.
* gnu/packages/perl-check.scm (perl-test-simple): Update to 1.302169.
2019-11-24 13:32:58 +01:00
Tobias Geerinckx-Rice 40df1928d6
gnu: restic: Update to 0.9.6.
* gnu/packages/backup.scm (restic): Update to 0.9.6.
2019-11-24 13:32:58 +01:00
Oleg Pykhalov 39bf4e0bad
gnu: Add shell-functools.
* gnu/packages/shellutils.scm (shell-functools): New variable.
2019-11-24 09:31:26 +03:00
Vagrant Cascadian 446316cad5
gnu: diffoscope: Update to 131.
* gnu/packages/diffoscope (diffoscope): Update to 131.
2019-11-23 18:55:46 -08:00
Oleg Pykhalov dd39f16ee6
gnu: jo: Update to 1.3.
* gnu/packages/web.scm (jo): Update to 1.3.
2019-11-24 05:14:52 +03:00
Oleg Pykhalov 82de17dc8d
gnu: sdl2: Add libxcursor to inputs.
* gnu/packages/sdl.scm (sdl2)[inputs]: Add libxcursor.
2019-11-24 03:35:36 +03:00
Tobias Geerinckx-Rice 68c47474bc
gnu: vte: Update to 0.58.3.
* gnu/packages/gnome.scm (vte): Update to 0.58.3.
[build-system]: Switch to Meson.
2019-11-24 01:19:56 +01:00
Tobias Geerinckx-Rice ac87ffb818
gnu: vte: Don't use NAME in source URI.
* gnu/packages/gnome.scm (vte)[source]: Hard-code NAME.
2019-11-24 01:19:56 +01:00
Tobias Geerinckx-Rice 37b23e447d
gnu: ruby-jaro-winkler: Update to 1.5.4.
* gnu/packages/ruby.scm (ruby-jaro-winkler): Update to 1.5.4.
2019-11-24 01:19:56 +01:00
Tobias Geerinckx-Rice 60bc8952ce
gnu: ruby-mimemagic: Update to 0.3.3.
* gnu/packages/ruby.scm (ruby-mimemagic): Update to 0.3.3.
2019-11-24 01:19:55 +01:00
Tobias Geerinckx-Rice 8c1e4a4f3d
gnu: ruby-notiffany: Update to 0.1.3.
* gnu/packages/ruby.scm (ruby-notiffany): Update to 0.1.3.
2019-11-24 01:19:55 +01:00
Tobias Geerinckx-Rice 5dd10be5ab
gnu: ruby-oauth2: Update to 1.4.2.
* gnu/packages/ruby.scm (ruby-oauth2): Update to 1.4.2.
2019-11-24 01:19:55 +01:00
Tobias Geerinckx-Rice d432682b49
gnu: ruby-simplecov: Update to 0.17.1.
* gnu/packages/ruby.scm (ruby-simplecov): Update to 0.17.1.
2019-11-24 01:19:55 +01:00
Tobias Geerinckx-Rice 2d2a2363e7
gnu: ruby-progressbar: Update to 1.10.1.
* gnu/packages/ruby.scm (ruby-progressbar): Update to 1.10.1.
2019-11-24 01:19:55 +01:00
Tobias Geerinckx-Rice 9d1cf6d42c
gnu: ruby-websocket-driver: Update to 0.7.1.
* gnu/packages/ruby.scm (ruby-websocket-driver): Update to 0.7.1.
2019-11-24 01:19:55 +01:00