Commit graph

78201 commits

Author SHA1 Message Date
Ricardo Wurmus 3dc2e7b082
gnu: r-ibreakdown: Update to 2.0.1.
* gnu/packages/cran.scm (r-ibreakdown): Update to 2.0.1.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus 8c1e07a266
gnu: r-ggplotify: Update to 0.0.7.
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.7.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus 72a4b4e34f
gnu: r-msigdbr: Update to 7.4.1.
* gnu/packages/cran.scm (r-msigdbr): Update to 7.4.1.
[propagated-inputs]: Add r-babelgene.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus 76cccb0971
gnu: r-pegas: Update to 1.0-1.
* gnu/packages/cran.scm (r-pegas): Update to 1.0-1.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus da372ae603
gnu: r-valr: Update to 0.6.3.
* gnu/packages/cran.scm (r-valr): Update to 0.6.3.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus bb5cc6548e
gnu: r-irkernel: Update to 1.2.
* gnu/packages/cran.scm (r-irkernel): Update to 1.2.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus c787a71189
gnu: r-fields: Update to 12.3.
* gnu/packages/cran.scm (r-fields): Update to 12.3.
[propagated-inputs]: Add r-viridis.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus c1648123c2
gnu: r-rnifti: Update to 1.3.1.
* gnu/packages/cran.scm (r-rnifti): Update to 1.3.1.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus ecf62c7321
gnu: r-softimpute: Update to 1.4-1.
* gnu/packages/cran.scm (r-softimpute): Update to 1.4-1.
[native-inputs]: Add r-knitr.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus ad88775716
gnu: r-fmsb: Update to 0.7.1.
* gnu/packages/cran.scm (r-fmsb): Update to 0.7.1.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus 2620a65479
gnu: r-ouch: Update to 2.17.
* gnu/packages/cran.scm (r-ouch): Update to 2.17.
2021-05-20 10:58:16 +02:00
Ricardo Wurmus 4341da5882
gnu: r-biocmanager: Update to 1.30.15.
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.15.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus cd488787af
gnu: r-rcppparallel: Update to 5.1.4.
* gnu/packages/cran.scm (r-rcppparallel): Update to 5.1.4.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus d381b1ac33
gnu: r-performance: Update to 0.7.2.
* gnu/packages/cran.scm (r-performance): Update to 0.7.2.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus dd99de3f13
gnu: r-sandwich: Update to 3.0-1.
* gnu/packages/cran.scm (r-sandwich): Update to 3.0-1.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus e35482dde9
gnu: r-flextable: Update to 0.6.6.
* gnu/packages/cran.scm (r-flextable): Update to 0.6.6.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus 6ea508485b
gnu: r-sjmisc: Update to 2.8.7.
* gnu/packages/cran.scm (r-sjmisc): Update to 2.8.7.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus f03f45c927
gnu: r-sjlabelled: Update to 1.1.8.
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.8.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus f2b9129d21
gnu: r-insight: Update to 0.14.0.
* gnu/packages/cran.scm (r-insight): Update to 0.14.0.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus ada22a989c
gnu: r-overlap: Update to 0.3.4.
* gnu/packages/cran.scm (r-overlap): Update to 0.3.4.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus 033977f7fb
gnu: r-arules: Update to 1.6-8.
* gnu/packages/cran.scm (r-arules): Update to 1.6-8.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus 5072b7b42a
gnu: r-cubature: Update to 2.0.4.2.
* gnu/packages/cran.scm (r-cubature): Update to 2.0.4.2.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus 1bccefef85
gnu: r-pillar: Update to 1.6.1.
* gnu/packages/cran.scm (r-pillar): Update to 1.6.1.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus c479174108
gnu: r-xfun: Update to 0.23.
* gnu/packages/cran.scm (r-xfun): Update to 0.23.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus 48024ed634
gnu: r-corrplot: Update to 0.88.
* gnu/packages/cran.scm (r-corrplot): Update to 0.88.
[native-inputs]: Add r-knitr.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus 31d01cf1e1
gnu: r-inline: Update to 0.3.18.
* gnu/packages/cran.scm (r-inline): Update to 0.3.18.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus 86ac5ac921
gnu: r-distillery: Update to 1.2-1.
* gnu/packages/cran.scm (r-distillery): Update to 1.2-1.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus 263f122e34
gnu: r-dendextend: Update to 1.15.1.
* gnu/packages/cran.scm (r-dendextend): Update to 1.15.1.
2021-05-20 10:58:15 +02:00
Ricardo Wurmus 581835a323
gnu: r-shape: Update to 1.4.6.
* gnu/packages/cran.scm (r-shape): Update to 1.4.6.
2021-05-20 10:58:14 +02:00
Ricardo Wurmus 90f206cf96
gnu: r-colorspace: Update to 2.0-1.
* gnu/packages/cran.scm (r-colorspace): Update to 2.0-1.
2021-05-20 10:58:14 +02:00
Ricardo Wurmus a2621406a1
gnu: r-bslib: Update to 0.2.5.1.
* gnu/packages/cran.scm (r-bslib): Update to 0.2.5.1.
[propagated-inputs]: Remove r-digest.
2021-05-20 10:58:14 +02:00
Ricardo Wurmus 2bfe0f5fed
gnu: r-sass: Update to 0.4.0.
* gnu/packages/cran.scm (r-sass): Update to 0.4.0.
[propagated-inputs]: Remove r-digest.
2021-05-20 10:58:14 +02:00
Ricardo Wurmus a819f9c497
gnu: r-htmltable: Update to 2.2.1.
* gnu/packages/cran.scm (r-htmltable): Update to 2.2.1.
2021-05-20 10:58:14 +02:00
Ricardo Wurmus 1a2b94668e
gnu: r-httpuv: Update to 1.6.1.
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.1.
2021-05-20 10:58:14 +02:00
Ricardo Wurmus 2a32b69ed3
gnu: r-cachem: Update to 1.0.5.
* gnu/packages/cran.scm (r-cachem): Update to 1.0.5.
2021-05-20 10:58:14 +02:00
Ricardo Wurmus c88e05b2db
gnu: Add r-babelgene.
* gnu/packages/cran.scm (r-babelgene): New variable.
2021-05-20 10:58:14 +02:00
Tobias Geerinckx-Rice 191e2347c5
gnu: isc-dhcp: Update bundled BIND to 9.11.32.
* gnu/packages/admin.scm (isc-dhcp)[inputs]: Update bundled BIND to 9.11.32.
2021-05-20 10:50:35 +02:00
Tobias Geerinckx-Rice cb3f25f43b
gnu: bind: Update to 9.16.16.
* gnu/packages/dns.scm (isc-bind): Update to 9.16.16.
2021-05-20 10:50:35 +02:00
Leo Famulari 516e9dda6b
gnu: linux-libre 5.4: Update to 5.4.120.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.120.
(linux-libre-5.4-pristine-source): Update hash.
2021-05-19 23:43:07 -04:00
Leo Famulari 2b3bfa5140
gnu: linux-libre 5.10: Update to 5.10.38.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.38.
(linux-libre-5.10-pristine-source): Update hash.
2021-05-19 23:43:07 -04:00
Leo Famulari 7bcf62b96b
gnu: linux-libre: Update to 5.11.22.
* gnu/packages/linux.scm (linux-libre-5.11-version): Update to 5.11.22.
(linux-libre-5.11-pristine-source): Update hash.
2021-05-19 23:43:07 -04:00
Leo Famulari cb94e88dfe
gnu: linux-libre 5.12: Update to 5.12.5.
* gnu/packages/linux.scm (linux-libre-5.12-version): Update to 5.12.5.
(linux-libre-5.12-pristine-source): Update hash.
2021-05-19 23:43:03 -04:00
Maxim Cournoyer a09cdf1f9d
services: opendht: Fix hang at boot.
Fixes <https://issues.guix.gnu.org/48521>.

The problem was caused by the 'file-system-mapping' record not being in scope.

* gnu/services/networking.scm (opendht-shepherd-service): Import the (gnu
system file-systems) module.
[requirement]: Depend on networking, to avoid spurious output.
[modules]: New field.
[start] <group>: New argument.
2021-05-19 22:46:52 -04:00
Leo Famulari 75abb01247
Revert "gnu: rxvt-unicode: Remove extraneous input."
This reverts commit c05b070cff.

This commit was not quite correct, since rxvt-unicode still depends on
libX11 directly.

* gnu/packages/xdisorg.scm (rxvt-unicode)[inputs]: Add libx11.
2021-05-19 20:48:15 -04:00
Tobias Geerinckx-Rice c0087d3370
The #guix channel is hosted by Libera Chat.
* README (Contact): Update network name.
* ROADMAP: Likewise.
* doc/contributing.texi (Contributing): Likewise.
* doc/guix.texi (After System Installation): Likewise.
2021-05-20 01:58:04 +02:00
Felix Gruber e942ed8159
gnu: Add schiffbruch.
* gnu/packages/games.scm (schiffbruch): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2021-05-19 23:18:12 +02:00
Ludovic Courtès 1ac137a365
doc: Fix references to the "geiser" package.
Reported by munksgaard on #guix.

* doc/guix.texi (Invoking guix pack): Replace "geiser" with
"emacs-geiser" in examples.
(Invoking guix refresh): Likewise.
2021-05-19 23:18:12 +02:00
Ricardo Wurmus 7dc75d5fd3
gnu: guile-redis: Update to 2.1.1.
* gnu/packages/guile-xyz.scm (guile-redis): Update to 2.1.1.
2021-05-19 23:11:17 +02:00
Efraim Flashner c50c56eacd
gnu: perl-log-log4perl: Update to 1.54.
* gnu/packages/perl.scm (perl-log-log4perl): Update to 1.54.
2021-05-19 23:26:28 +03:00
Efraim Flashner 5cdd95eb69
gnu: perl-carp-assert-more: Update to 1.26.
* gnu/packages/perl.scm (perl-carp-assert-more): Update to 1.26.
2021-05-19 23:19:03 +03:00