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Author SHA1 Message Date
Ricardo Wurmus 816d52ba93
gnu: Add r-megadepth. 
* gnu/packages/bioconductor.scm (r-megadepth): New variable.
 2021-09-06 14:48:24 +02:00
Ricardo Wurmus 2f16659b40
gnu: Add r-ballgown. 
* gnu/packages/bioconductor.scm (r-ballgown): New variable.
 2021-08-25 12:30:33 +02:00
Ricardo Wurmus 68b22a8541
gnu: r-delayedmatrixstats: Update to 1.14.2. 
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.14.2.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus 26d6db11f0
gnu: r-sparsematrixstats: Update to 1.4.2. 
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.4.2.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus b2316605e2
gnu: r-scuttle: Update to 1.2.1. 
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.2.1.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus 2897ad3178
gnu: r-beachmat: Update to 2.8.1. 
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.8.1.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus da7e7c9de8
gnu: r-biocset: Update to 1.6.1. 
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.6.1.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus 9ff9a4756d
gnu: r-universalmotif: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.10.2.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus 0022f40462
gnu: r-clusterprofiler: Update to 4.0.4. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.4.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus 5543456ae9
gnu: r-dose: Update to 3.18.2. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.18.2.
 2021-08-24 12:28:13 +02:00
Ricardo Wurmus 1c23b99a3c
gnu: r-batchelor: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.8.1.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus 82d6774757
gnu: r-ggtree: Update to 3.0.3. 
* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.0.3.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus e4ad91eb3e
gnu: r-treeio: Update to 1.16.2. 
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.16.2.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus 917f0def66
gnu: r-matrixgenerics: Update to 1.4.2. 
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.4.2.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus 3ef4c12a49
gnu: r-chippeakanno: Update to 3.26.3. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.26.3.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus 33fedd371a
gnu: r-diffbind: Update to 3.2.5. 
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.2.5.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus 514454cc8f
gnu: r-structuralvariantannotation: Update to 1.8.2. 
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.8.2.
[propagated-inputs]: Add r-genomeinfodb, r-iranges, r-s4vectors, and
r-summarizedexperiment.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus 1920e567a7
gnu: r-rtracklayer: Update to 1.52.1. 
* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.52.1.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus 495c50c68d
gnu: r-limma: Update to 3.48.3. 
* gnu/packages/bioconductor.scm (r-limma): Update to 3.48.3.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus 3277c4e749
gnu: r-genomicfeatures: Update to 1.44.1. 
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.44.1.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus 8df84bedf7
gnu: r-ensembldb: Update to 2.16.4. 
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.4.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus e46cf457bb
gnu: r-biostrings: Update to 2.60.2. 
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.60.2.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus 227579e84a
gnu: r-biomart: Update to 2.48.3. 
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.48.3.
 2021-08-24 12:28:12 +02:00
Ricardo Wurmus 1aceb93a6f
gnu: r-ldblock: Update to 1.22.1. 
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.22.1.
 2021-08-04 16:21:17 +02:00
Ricardo Wurmus 5909dd9e8e
gnu: r-roc: Update to 1.68.1. 
* gnu/packages/bioconductor.scm (r-roc): Update to 1.68.1.
 2021-08-04 16:21:16 +02:00
Ricardo Wurmus b94c750e01
gnu: r-mixomics: Update to 6.16.3. 
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.3.
 2021-08-04 16:21:16 +02:00
Ricardo Wurmus 6da8e99c9c
gnu: r-gosemsim: Update to 2.18.1. 
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.18.1.
 2021-08-04 16:21:12 +02:00
Ricardo Wurmus 75ec0fa243
gnu: Add r-tximeta. 
* gnu/packages/bioconductor.scm (r-tximeta): New variable.
 2021-08-04 13:04:04 +02:00
Ricardo Wurmus ffb381856d
gnu: r-xcms: Update to 3.14.1. 
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.14.1.
 2021-07-29 20:20:18 +02:00
Ricardo Wurmus e06beb503c
gnu: r-reportingtools: Update to 2.32.1. 
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.32.1.
 2021-07-29 20:20:15 +02:00
Ricardo Wurmus a32241fcda
gnu: r-catalyst: Update to 1.16.2. 
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.16.2.
 2021-07-28 22:26:56 +02:00
Ricardo Wurmus 9d7eb480f8
gnu: r-mixomics: Update to 6.16.2. 
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.2.
 2021-07-28 22:26:56 +02:00
Ricardo Wurmus d0d3637c92
gnu: r-rsubread: Update to 2.6.4. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.6.4.
 2021-07-28 22:26:56 +02:00
Ricardo Wurmus 8d9626dd7d
gnu: r-annotatr: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.18.1.
 2021-07-28 22:26:56 +02:00
Ricardo Wurmus 73fa220b43
gnu: r-motifbreakr: Update to 2.6.1. 
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.6.1.
 2021-07-28 22:26:55 +02:00
Ricardo Wurmus 336b110f69
gnu: r-scone: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-scone): Update to 1.16.1.
 2021-07-28 22:26:55 +02:00
Ricardo Wurmus fd0851ee97
gnu: r-chippeakanno: Update to 3.26.2. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.26.2.
 2021-07-28 22:26:55 +02:00
Ricardo Wurmus acc62073be
gnu: r-ensembldb: Update to 2.16.3. 
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.3.
 2021-07-28 22:26:55 +02:00
Tobias Geerinckx-Rice 5079aa2afd
gnu: r-structuralvariantannotation: Update to 1.8.1. 
The previous 1.8.0 source tarball has vanished.

* gnu/packages/bioconductor.scm (r-structuralvariantannotation):
Update to 1.8.1.
[propagated-inputs]: Add r-genomicfeatures.
 2021-07-25 19:39:11 +02:00
Ricardo Wurmus 4140b66837
gnu: r-gviz: Update to 1.36.2. 
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.36.2.
 2021-07-10 21:35:29 +02:00
Ricardo Wurmus 564142d25e
gnu: r-catalyst: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.16.1.
 2021-07-10 21:35:29 +02:00
Ricardo Wurmus c4ffceb0c2
gnu: r-rhdf5lib: Update to 1.14.2. 
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.14.2.
 2021-07-10 21:35:29 +02:00
Ricardo Wurmus e957d6c93b
gnu: r-bioconcotk: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.12.1.
 2021-07-10 21:35:29 +02:00
Ricardo Wurmus 1cbcf54204
gnu: r-biocstyle: Update to 2.20.2. 
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.20.2.
 2021-07-10 21:35:29 +02:00
Ricardo Wurmus 23abd7b6b6
gnu: r-mixomics: Update to 6.16.1. 
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.1.
 2021-07-10 21:35:29 +02:00
Ricardo Wurmus 3d539883ca
gnu: r-rsubread: Update to 2.6.3. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.6.3.
 2021-07-10 21:35:29 +02:00
Ricardo Wurmus a94d1e3b4c
gnu: r-annaffy: Update to 1.64.2. 
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.64.2.
 2021-07-10 21:35:29 +02:00
Ricardo Wurmus 344c901a4c
gnu: r-clusterprofiler: Update to 4.0.2. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.2.
 2021-07-10 21:35:29 +02:00
Ricardo Wurmus a5e6826020
gnu: r-enrichplot: Update to 1.12.2. 
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.12.2.
 2021-07-10 21:35:29 +02:00
Ricardo Wurmus 209642912d
gnu: r-dose: Update to 3.18.1. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.18.1.
 2021-07-10 21:35:29 +02:00