gnu: Add r-ballgown.
* gnu/packages/bioconductor.scm (r-ballgown): New variable.
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@ -13666,6 +13666,40 @@ (define-public r-sushi
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visualizations for publication-quality multi-panel figures.")
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(license license:gpl2+)))
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(define-public r-ballgown
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(package
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(name "r-ballgown")
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(version "2.24.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "ballgown" version))
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(sha256
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(base32
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"0ff8z4pfgzai2q4aafclg36bhsi9jwl9xhh1p9fqhmikisscq7i1"))))
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(properties `((upstream-name . "ballgown")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biobase" ,r-biobase)
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("r-genomeinfodb" ,r-genomeinfodb)
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("r-genomicranges" ,r-genomicranges)
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("r-iranges" ,r-iranges)
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("r-limma" ,r-limma)
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("r-rcolorbrewer" ,r-rcolorbrewer)
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("r-rtracklayer" ,r-rtracklayer)
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("r-s4vectors" ,r-s4vectors)
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("r-sva" ,r-sva)))
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(native-inputs
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`(("r-knitr" ,r-knitr)))
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(home-page "https://bioconductor.org/packages/ballgown")
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(synopsis "Flexible, isoform-level differential expression analysis")
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(description
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"This package provides tools for statistical analysis of assembled
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transcriptomes, including flexible differential expression analysis,
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visualization of transcript structures, and matching of assembled transcripts
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to annotation.")
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(license license:artistic2.0)))
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(define-public r-tximeta
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(package
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(name "r-tximeta")
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