Commit graph

35942 commits

Author SHA1 Message Date
Efraim Flashner
2c17bd7b29
gnu: kodi: Disable version checker.
Fixes bug#32997.

* gnu/packages/kodi.scm (kodi)[arguments]: Add substitution to remove
the version checking configuration option.
2018-10-21 16:39:26 +03:00
Ben Woodcroft
617c478506
gnu: python2-dendropy: Disable failing test.
* gnu/packages/bioinformatics.scm (python2-dendropy)[arguments]: Disable
failing test.
2018-10-21 22:31:56 +10:00
Ricardo Wurmus
21c837405a
gnu: bowtie: Update to 2.3.4.3.
* gnu/packages/bioinformatics.scm (bowtie): Update to 2.3.4.3.
[source]: Fetch from git.
[inputs]: Replace python-2 with python-wrapper; move perl, perl-clone,
perl-test-deep, and perl-test-simple from here...
[native-inputs]: ...to here.
[arguments]: Simplify check phase.
2018-10-20 23:37:34 +02:00
Ricardo Wurmus
f45093429c
gnu: blast+: Use INVOKE and return #T unconditionally.
* gnu/packages/bioinformatics.scm (blast+)[arguments]: Use INVOKE and
return #T unconditionally.
2018-10-20 23:37:34 +02:00
Ricardo Wurmus
f8b697a385
gnu: bedops: Update to 2.4.35.
* gnu/packages/bioinformatics.scm (bedops): Update to 2.4.35.
[source]: Fetch from git.
2018-10-20 23:37:34 +02:00
Ricardo Wurmus
337d72fb44
gnu: bedops: Use INVOKE.
* gnu/packages/bioinformatics.scm (bedops)[arguments]: Use INVOKE.
2018-10-20 23:37:34 +02:00
Ricardo Wurmus
c793f4d8fb
gnu: bamm: Fetch from git and use INVOKE.
* gnu/packages/bioinformatics.scm (bamm)[source]: Fetch from git.
[arguments]: Use INVOKE and return #T unconditionally.
2018-10-20 23:37:34 +02:00
Ricardo Wurmus
95758e2faf
gnu: aragorn: Use invoke and simplify.
* gnu/packages/bioinformatics.scm (aragorn)[arguments]: Use INVOKE in build
phase; simplify install phase.
2018-10-20 23:37:33 +02:00
Ricardo Wurmus
8b4102b903
gnu: clipper: Update to 1.2.1.
* gnu/packages/bioinformatics.scm (clipper): Update to 1.2.1.
[source]: Fetch from git.
[arguments]: Add fix-typo phase.
2018-10-20 23:37:33 +02:00
Ricardo Wurmus
895cf8278a
gnu: python-pybedtools: Update to 0.7.10.
* gnu/packages/bioinformatics.scm (python2-pybedtools): Update to 0.7.10.
[arguments]: Disable broken tests.
[propagated-inputs]: Replace bedtools with bedtools-2.26; add
python-matplotlib, python-pysam, and python-pyyaml.
[native-inputs]: Remove python-pyyaml; add kentutils, python-numpy,
python-pandas, and python-six.
(python-pybedtools): New variable.
2018-10-20 23:37:33 +02:00
Ricardo Wurmus
129363b762
gnu: Add bedtools-2.26.
* gnu/packages/bioinformatics.scm (bedtools-2.26): New variable.
2018-10-20 23:37:28 +02:00
Kei Kebreau
bfa47f14b1
gnu: cataclysm-dda: Update snapshot.
* gnu/packages/games.scm (cataclysm-dda): Update snapshot to 0b2c194e5.
2018-10-20 14:38:45 -04:00
Kei Kebreau
82cbe4e046
gnu: maxima: Update to 5.42.0.
* gnu/packages/maths.scm (maxima): Update to 5.42.0.
2018-10-20 14:38:45 -04:00
Oleg Pykhalov
227da3a4c5
gnu: python-glances: Update to 3.0.2.
* gnu/packages/python.scm (python-glances): Update to 3.0.2.
2018-10-20 18:24:23 +03:00
Oleg Pykhalov
67fd64a490
gnu: emacs-hy-mode: Update to 1.0.3.
* gnu/packages/emacs.scm (emacs-hy-mode): Update to 1.0.3.
2018-10-20 17:48:58 +03:00
Oleg Pykhalov
e661dca879
gnu: emacs-erc-hl-nicks: Update to 1.3.3.
* gnu/packages/emacs.scm (emacs-erc-hl-nicks): Update to 1.3.3.
2018-10-20 17:48:49 +03:00
Oleg Pykhalov
91c5e6a69d
gnu: emacs-yasnippet: Update to 0.13.0.
* gnu/packages/emacs.scm (emacs-yasnippet): Update to 0.13.0.
2018-10-20 17:48:36 +03:00
Oleg Pykhalov
292d637b9e
gnu: emacs-nginx-mode: Update to 1.1.9.
* gnu/packages/emacs.scm (emacs-nginx-mode): Update to 1.1.9.
2018-10-20 17:48:28 +03:00
Oleg Pykhalov
2f1dacc281
gnu: emacs-rainbow-mode: Update to 1.0.1.
* gnu/packages/emacs.scm (emacs-rainbow-mode): Update to 1.0.1.
2018-10-20 17:48:07 +03:00
Oleg Pykhalov
45dcdf5349
gnu: emacs-smart-mode-line: Update to 2.12.0.
* gnu/packages/emacs.scm (emacs-smart-mode-line): Update to 2.12.0.
2018-10-20 17:47:46 +03:00
Oleg Pykhalov
9137596179
gnu: emacs-fill-column-indicator: Update to 1.89.
* gnu/packages/emacs.scm (emacs-fill-column-indicator): Update to 1.89.
2018-10-20 17:47:13 +03:00
Oleg Pykhalov
83246854f3
gnu: emacs-ggtags: Update to 0.8.13.
* gnu/packages/emacs.scm (emacs-ggtags): Update to 0.8.13.
2018-10-20 17:46:43 +03:00
Oleg Pykhalov
42f9ebdc77
gnu: emacs-which-key: Update to 3.3.0.
* gnu/packages/emacs.scm (emacs-which-key): Update to 3.3.0.
2018-10-20 17:37:32 +03:00
Christopher Baines
0d3f170864
gnu: Add soundconverter.
* gnu/packages/gnome.scm (soundconverter): New variable.
* gnu/packages/patches/soundconverter-remove-gconf-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-10-20 12:24:50 +01:00
nixo
b5a927b3ba
gnu: Add enchive.
* gnu/packages/crypto.scm (enchive): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19 23:39:41 +02:00
Ludovic Courtès
64791eb7e1
services: ntp: Document 'ntp-service-type' and 'ntp-configuration'.
* gnu/services/networking.scm (<ntp-configuration>)[servers]: Add
default value.
(ntp-service-type)[default-value]: New field.
(ntp-service): Mark as deprecated.
* gnu/services/desktop.scm (%desktop-services): Use (service
ntp-service-type) instead of calling 'ntp-service'.
* doc/guix.texi (Networking Services): Document 'ntp-service-type' and
'ntp-configuration'.
2018-10-19 23:39:41 +02:00
Meiyo Peng
bc83b2e22f
gnu: Add i3blocks.
* gnu/packages/wm.scm (i3blocks): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19 23:39:37 +02:00
Ricardo Wurmus
cdb84eb0e6
gnu: qsynth: Update to 0.5.3.
* gnu/packages/audio.scm (qsynth): Update to 0.5.3.
2018-10-19 21:59:28 +02:00
Ludovic Courtès
0ee6692a63
gnu: sbcl-slime-swank: Remove reference to unbound variable.
Fixes a regression introduced in commit
c4d4ae1e16.

* gnu/packages/lisp.scm (sbcl-slime-swank)[license]: Remove extra 'license'.
2018-10-19 18:34:07 +02:00
Amirouche
b1e6b93805
gnu: guile-wiredtiger: Update to 0.7.0.
* gnu/packages/databases.scm (guile-wiredtiger): Update to 0.7.0.
[inputs]: Replace wiredtiger with wiredtiger-3
[propagated-inputs]: Remove guile-lib, add guile-bytestructures
[description]: Update it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19 18:28:57 +02:00
Amirouche
4680fef705
gnu: Add wiredtiger 3.1.0
* gnu/packages/databases.scm (wiredtiger-3): New variable that inherits from
  wiredtiger

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19 18:28:57 +02:00
Ludovic Courtès
19c924af4f
tests: Run 'guix pack' tests using the external store.
Fixes <https://bugs.gnu.org/32184>.

* guix/tests.scm (call-with-external-store): New procedure.
(with-external-store): New macro.
* tests/pack.scm (%store): Remove.
(test-assertm): Add 'store' parameter.
("self-contained-tarball"): Wrap in 'with-external-store'.
* tests/guix-pack.sh: Connect to the external store, if possible, by
setting NIX_STORE_DIR and GUIX_DAEMON_SOCKET.  Remove most uses of
'--bootstrap'.
2018-10-19 18:28:57 +02:00
Ludovic Courtès
fbdb7b9526
pack: Fix "-C none -f tarball".
Fixes a regression introduced in
48b444304e whereby "guix pack -C none
hello" would fail with:

  ERROR: In procedure string-join:
  In procedure string-join: Wrong type argument in position 1: #f
  builder for `/gnu/store/…-tarball-pack.tar.drv' failed with exit code 1

* guix/scripts/pack.scm (self-contained-tarball): Adjust for when
'compressor-command' returns #f.
2018-10-19 18:28:57 +02:00
Pierre Neidhardt
3bd45f5c80
gnu: emacs-slime: License is a mix of GPL2+ and public domain.
* gnu/packages/emacs.scm (emacs-slime)[license]: Update to (gpl2+ public-domain)
2018-10-19 18:00:14 +02:00
Pierre Neidhardt
e2e5004f6e
gnu: Add lparallel.
* gnu/packages/lisp.scm (cl-lparallel, ecl-lparallel, sbcl-lparallel): New variables.
2018-10-19 17:56:38 +02:00
Pierre Neidhardt
24fd7586a4
gnu: Add sbcl-cl-webkit.
* gnu/packages/lisp.scm (sbcl-cl-webkit): New variable.
2018-10-19 17:56:38 +02:00
Pierre Neidhardt
c80dfee9f1
gnu: Add sbcl-cl-cffi-gtk.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk): New variable.
2018-10-19 17:56:38 +02:00
Pierre Neidhardt
7b5b8c4405
gnu: Add sbcl-cl-cffi-gtk-gdk.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-gdk): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
a3bdddc359
gnu: Add sbcl-cl-cffi-gtk-gdk-pixbuf.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-gdk-pixbuf): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
9ecc457b52
gnu: Add sbcl-cl-cffi-gtk-pango.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-pango): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
7176fe7c32
gnu: Add sbcl-cl-cffi-gtk-cairo.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-cairo): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
867b3f4780
gnu: Add sbcl-cl-cffi-gtk-gio.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-gio): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
77a5461c31
gnu: Add sbcl-cl-cffi-gtk-gobject.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-gobject): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
64dcf7d99b
gnu: Add sbcl-cl-cffi-gtk-glib.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-glib): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
c88985d9b0
gnu: Add sbcl-cl-cffi-gtk.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
85be9191ee
gnu: Add closer-mop.
* gnu/packages/lisp.scm (cl-closer-mop, ecl-closer-mop, sbcl-closer-mop): New variables.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
4aa2342008
gnu: Add trivial-garbage.
* gnu/packages/lisp.scm (cl-trivial-garbage, ecl-trivial-garbage, sbcl-trivial-garbage): New variables.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
2cc931db44
gnu: Add cl-unix-opts.
* gnu/packages/lisp.scm (cl-unix-opts, ecl-unix-opts, sbcl-unix-opts): New variables.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
dedbf37e5d
gnu: Add cl-json.
* gnu/packages/lisp.scm (cl-json, ecl-cl-json, sbcl-cl-json): New variables.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt
4624d2e2b4
gnu: Add parenscript.
* gnu/packages/lisp.scm (cl-parenscript, ecl-parenscript, sbcl-parenscript): New variables.
2018-10-19 17:56:36 +02:00