Efraim Flashner
2c0b715389
gnu: editorconfig-vim: Update to 1.1.1.
...
* gnu/packages/vim.scm (editorconfig-vim): Update to 1.1.1.
[source]: Remove snippet.
[arguments]: Remove custom 'patch-editorconfig-path phase.
[inputs]: Remove editorconfig-core-c.
2020-09-12 22:33:26 +03:00
Ricardo Wurmus
fb24a4d5b8
gnu: muse-sequencer: Enable more features.
...
* gnu/packages/music.scm (muse-sequencer)[arguments]: Add phase "fix-include"
to patch header file reference; remove obsolete ENABLE_LV2_SUPPLIED
configuration option; remove ENABLE_RTAUDIO=OFF.
[inputs]: Add lrdf, pulseaudio, rtaudio, and rubberband.
2020-09-12 14:53:33 +02:00
Ricardo Wurmus
5525aea7cf
gnu: muse-sequencer: Update to 3.1.1.
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* gnu/packages/music.scm (muse-sequencer): Update to 3.1.1.
[arguments]: Set CMAKE_EXE_LINKER_FLAGS and CMAKE_SHARED_LINKER_FLAGS; end
"chdir" phase with #T.
2020-09-12 14:53:33 +02:00
Nicolas Goaziou
61e7fa07c8
gnu: emacs-pdf-tools: Update to 0.90-1.
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* gnu/packages/emacs-xyz.scm (emacs-pdf-tools): Update to 0.90-1. Fix
indentation.
Update to an unreleased commit to fix an incompatibility with Emacs 27+.
2020-09-12 14:09:40 +02:00
Oleg Pykhalov
5f5ff266e5
Revert "gnu: linux-libre: Update to 5.8.8."
...
This reverts commit ad42c20921
, which breaks
"guix system build" as described in <https://issues.guix.info/issue/43352 >.
2020-09-12 13:20:54 +03:00
Maxim Cournoyer
140da556be
ui: Lexicographically sort transaction entries based on their package name.
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* guix/ui.scm (show-manifest-transaction): Sort entries to be displayed in a
tabulated view.
2020-09-12 02:08:14 -04:00
Maxim Cournoyer
7d3eb5e6b7
ui: Refactor the package-strings helper in show-manifest-transaction.
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* guix/ui.scm (show-manifest-transaction)[package-strings]: Add an
OLD-VERSIONS keyword parameter. Absorb the code path previously found in the
upgrade-string. Remove upgrade-string.
(show-manifest-transaction): Adjust to the above changes.
2020-09-12 02:08:14 -04:00
Maxim Cournoyer
71e746cc63
doc: Document the use of snippets vs phases.
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* doc/contributing.texi (Snippets versus phases): New section.
2020-09-12 02:01:35 -04:00
Danny Milosavljevic
8ed0c56725
gnu: python-aiodns: Propagate python-pycares.
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* gnu/packages/python-web.scm (python-aiodns)[inputs]: Move python-pycares...
[propagated-inputs]: ...to here.
2020-09-12 02:33:06 +02:00
Raghav Gururajan
dbcfefe5ec
gnu: Add poezio.
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* gnu/packages/messaging.scm (poezio): New variable.
2020-09-12 02:25:31 +02:00
Raghav Gururajan
c6e8d17b02
gnu: Add python-potr.
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* gnu/packages/python-crypto.scm (python-potr): New variable.
2020-09-12 02:19:05 +02:00
Raghav Gururajan
c519a5b5b6
gnu: Add python-slixmpp.
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* gnu/packages/python-xyz.scm (python-slixmpp): New variable.
2020-09-12 02:16:57 +02:00
Danny Milosavljevic
e88242cb75
gnu: ebusd: Enable MQTT support.
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* gnu/packages/embedded.scm (ebusd)[inputs]: Add mosquitto.
2020-09-12 02:07:34 +02:00
Danny Milosavljevic
c3bbaea727
gnu: Add mosquitto.
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* gnu/packages/messaging.scm (mosquitto): New variable.
2020-09-12 02:07:30 +02:00
Tobias Geerinckx-Rice
52569eeb7f
gnu: lldpd: Update to 1.0.6.
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* gnu/packages/networking.scm (lldpd): Update to 1.0.6.
2020-09-11 23:30:45 +02:00
Tobias Geerinckx-Rice
dd6eac3e47
gnu: enet: Update to 1.3.16.
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* gnu/packages/networking.scm (enet): Update to 1.3.16.
2020-09-11 23:30:45 +02:00
Tobias Geerinckx-Rice
0649c3cafa
gnu: batctl: Update to 2020.3.
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* gnu/packages/networking.scm (batctl): Update to 2020.3.
2020-09-11 23:30:44 +02:00
Tobias Geerinckx-Rice
54151d1af5
Revert "gnu: dovecot: Set moduledir to global directory."
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This reverts commit db0109be42
.
Same reason as commit d9d88c2ff0
.
2020-09-11 23:30:44 +02:00
Tobias Geerinckx-Rice
d9d88c2ff0
Revert "services: dovecot: Use modules via symlink to system profile."
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This reverts commit bcfe0f0c1e
for now.
It breaks most current use(r)s of the Dovecot service and needs to be
combined with an extra modules configuration field of some kind.
See <https://issues.guix.gnu.org/43347 >.
2020-09-11 22:38:08 +02:00
Tobias Geerinckx-Rice
ef500f9be4
gnu: padthv1: Update to 0.9.17.
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* gnu/packages/music.scm (padthv1): Update to 0.9.17.
[inputs]: Replace fftw with fftwf.
2020-09-11 22:38:07 +02:00
Tobias Geerinckx-Rice
a43fcc720e
gnu: libetpan: Update to 1.9.4.
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* gnu/packages/mail.scm (libetpan): Update to 1.9.4.
2020-09-11 22:38:07 +02:00
Ricardo Wurmus
a1ea0585d0
gnu: bsequencer: Update to 1.6.0.
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* gnu/packages/music.scm (bsequencer): Update to 1.6.0.
2020-09-11 22:19:26 +02:00
Ricardo Wurmus
8458490bc2
gnu: r-adaptivesparsity: End build phase on #T.
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* gnu/packages/cran.scm (r-adaptivesparsity)[arguments]: End phase
"link-against-armadillo" with Boolean.
2020-09-11 22:04:41 +02:00
Ricardo Wurmus
fd498532ab
gnu: r-adaptivesparsity: Fix case of "Gaussian".
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* gnu/packages/cran.scm (r-adaptivesparsity)[description]: Fix typo.
2020-09-11 22:04:12 +02:00
Ricardo Wurmus
dbef55b7aa
gnu: r-qtl: Use CRAN-URI.
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* gnu/packages/cran.scm (r-qtl)[source]: Use CRAN-URI instead of explicit
mirror URL.
2020-09-11 22:02:22 +02:00
Ricardo Wurmus
1e8bfc4cf9
gnu: r-qtl: Correct indentation.
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* gnu/packages/cran.scm (r-qtl): Reindent.
[description]: Reflow paragraphs.
2020-09-11 22:00:30 +02:00
zimoun
d4e2ec1b8a
gnu: r-absfiltergsea: Move to (gnu packages cran).
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* gnu/packages/bioinformatics.scm (r-absfiltergsea): Move from here...
* gnu/packages/cran.scm (r-absfiltergsea): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:23 +02:00
zimoun
77c7394086
gnu: r-diversitree: Move to (gnu packages cran).
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* gnu/packages/bioinformatics.scm (r-diversitree): Move from here...
* gnu/packages/cran.scm (r-diversitree): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:23 +02:00
zimoun
415aa8a583
gnu: r-phangorn: Move to (gnu packages cran).
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* gnu/packages/bioinformatics.scm (r-phangorn): Move from here...
* gnu/packages/cran.scm (r-phangorn): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:21 +02:00
zimoun
f9c0b2e05a
gnu: r-seurat: Move to (gnu packages cran).
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* gnu/packages/bioinformatics.scm (r-seurat): Move from here...
* gnu/packages/cran.scm (r-seurat): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:17 +02:00
zimoun
b31c364467
gnu: r-maldiquant: Move to (gnu packages cran).
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* gnu/packages/bioinformatics.scm (r-maldiquant): Move from here...
* gnu/packages/cran.scm (r-maldiquant): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:12 +02:00
zimoun
30aaee3306
gnu: r-seqminer: Move to (gnu packages cran).
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* gnu/packages/bioinformatics.scm (r-seqminer): Move from here...
* gnu/packages/cran.scm (r-seqminer): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:07 +02:00
zimoun
66a8e62070
gnu: r-qtl2: Move to (gnu packages cran).
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* gnu/packages/bioinformatics.scm (r-qtl2): Move from here...
* gnu/packages/cran.scm (r-qtl2): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:03 +02:00
zimoun
496a52dc41
gnu: r-qtl: Move to (gnu packages cran).
...
* gnu/packages/bioinformatics.scm (r-qtl): Move from here...
* gnu/packages/cran.scm (r-qtl): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:58:58 +02:00
zimoun
c23ff34423
gnu: r-igraph: Move to (gnu packages cran).
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* gnu/packages/graph.scm (r-igraph): Move from here...
* gnu/packages/cran.scm (r-igraph): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:58:55 +02:00
zimoun
1dc50e4190
gnu: r-diffusionmap: Move to (gnu packages cran).
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* gnu/packages/graph.scm (r-diffusionmap): Move from here...
* gnu/packages/cran.scm (r-diffusionmap): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:58:49 +02:00
zimoun
d3d38bd8f1
gnu: r-adaptivesparsity: Move to (gnu packages cran).
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* gnu/packages/machine-learning.scm (r-adaptivesparsity): Move from here...
* gnu/packages/cran.scm (r-adaptivesparsity): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:48:38 +02:00
zimoun
b17ace24ca
gnu: r-codedepends: Comment why it is in bioconductor.scm.
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* gnu/packages/bioconductor.scm (r-codedepends): Add comment.
2020-09-11 21:46:51 +02:00
Peter Lo
7e88ee9f02
gnu: Add r-fhtest.
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* gnu/packages/bioconductor.scm (r-fhtest): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:33:02 +02:00
Peter Lo
655c4bb25c
gnu: Add r-interval.
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* gnu/packages/bioconductor.scm (r-interval): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:01:30 +02:00
Peter Lo
962c7ceff5
gnu: Add r-perm.
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* gnu/packages/cran.scm (r-perm): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 19:18:46 +02:00
Peter Lo
4a13770003
gnu: Add r-mlecens.
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* gnu/packages/cran.scm (r-mlecens): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 19:16:51 +02:00
Peter Lo
488001eb3f
gnu: Add r-icens.
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* gnu/packages/bioconductor.scm (r-icens): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 19:13:58 +02:00
Ricardo Wurmus
19748ea380
gnu: r-tidymodels: Update to 0.1.1.
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* gnu/packages/cran.scm (r-tidymodels): Update to 0.1.1.
[propagated-inputs]: Remove r-pillar, r-tidyposterior, r-tidypredict, and
r-tidytext; add r-modeldata and r-tidyr.
[native-inputs]: Add r-rmarkdown, pandoc, and pandoc-citeproc.
2020-09-11 19:06:47 +02:00
Ricardo Wurmus
cecb700853
gnu: r-infer: Update to 0.5.3.
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* gnu/packages/cran.scm (r-infer): Update to 0.5.3.
2020-09-11 19:06:47 +02:00
Ricardo Wurmus
6edf558fd0
gnu: Add r-modeldata.
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* gnu/packages/cran.scm (r-modeldata): New variable.
2020-09-11 19:06:47 +02:00
Ricardo Wurmus
37e9a7fabf
gnu: r-parsnip: Update to 0.1.3.
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* gnu/packages/cran.scm (r-parsnip): Update to 0.1.3.
2020-09-11 19:04:10 +02:00
Ricardo Wurmus
f5d7f42ae2
gnu: r-tidytext: Update to 0.2.5.
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* gnu/packages/cran.scm (r-tidytext): Update to 0.2.5.
[propagated-inputs]: Remove r-stopwords; add r-tibble.
2020-09-11 19:04:06 +02:00
Ricardo Wurmus
0fa58b2488
gnu: r-tidypredict: Update to 0.4.6.
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* gnu/packages/cran.scm (r-tidypredict): Update to 0.4.6.
2020-09-11 19:04:01 +02:00
Ricardo Wurmus
471f0aacd2
gnu: r-tune: Update to 0.1.1.
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* gnu/packages/cran.scm (r-tune): Update to 0.1.1.
[propagated-inputs]: Add r-vctrs.
2020-09-11 19:03:58 +02:00