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Author SHA1 Message Date
Vincent Legoll
2a9739b114
gnu: apr: Update to 1.7.0. 
* gnu/packages/apr.scm (apr): Update to 1.7.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-11-11 10:31:14 -05:00
Ludovic Courtès
745d3a9b44
store: 'mapm/accumulate-builds' does not compare stores with 'eq?'. 
Fixes <https://issues.guix.gnu.org/51732>.
Regression introduced in 2015d3f042.

The (eq? store expected-store) comparison doesn't work on this branch
where the functional cache, with 'cache-object-mapping', is used
extensively, thereby changing the store's object identity.

* guix/store.scm (build-accumulator): Compare the socket of STORE and
EXPECTED-STORE rather than the store themselves.
 2021-11-10 00:39:10 +01:00
Vivien Kraus
d855119ece
gnu: deja-dup: Update to 42.8. 
* gnu/packages/gnome.scm (deja-dup): Update to 42.8.
* gnu/packages/gnome.scm (deja-dup)[inputs]: Add libhandy.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-09 08:54:01 +01:00
Vivien Kraus
648b81211f
gnu: unison: Fix building the manual. 
* gnu/packages/ocaml.scm (unison)[native-inputs]: Add the missing texlive inputs.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-09 00:02:46 +01:00
Vivien Kraus
32db65b787
gnu: Add texlive-dvips-l3backend. 
* gnu/packages/tex.scm (texlive-dvips-l3backend): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-11-09 00:02:39 +01:00
Efraim Flashner
1c94392a13
Merge remote-tracking branch 'origin/master' into core-updates-frozen 2021-11-08 09:06:14 +02:00
Tobias Geerinckx-Rice
9d25ee30b1
gnu: nginx-documentation: Update to 1.21.4-2791-9385526a9b2d. 
* gnu/packages/web.scm (nginx-documentation): Update to 1.21.4-2791-9385526a9b2d.
 2021-11-08 02:15:24 +01:00
Tobias Geerinckx-Rice
805ca61eb9
gnu: nginx: Update to 1.21.4. 
* gnu/packages/web.scm (nginx): Update to 1.21.4.
 2021-11-08 02:15:24 +01:00
Tobias Geerinckx-Rice
3f4eb02fe5
gnu: fheroes2: Update to 0.9.9. 
* gnu/packages/games.scm (fheroes2): Update to 0.9.9.
 2021-11-08 02:15:24 +01:00
Tobias Geerinckx-Rice
551047838d
gnu: knot: Update to 3.1.4. 
* gnu/packages/dns.scm (knot): Update to 3.1.4.
 2021-11-08 02:15:24 +01:00
Tobias Geerinckx-Rice
e568b14076
gnu: hplip: Update to 3.21.10. 
* gnu/packages/cups.scm (hplip): Update to 3.21.10.
[snippet]: Make substitution patterns more specific.
[arguments]: Don't explicitly return #t from phases.
 2021-11-08 02:15:23 +01:00
Tobias Geerinckx-Rice
e46e144b42
gnu: redkite: Update to 1.3.1. 
* gnu/packages/audio.scm (redkite): Update to 1.3.1.
 2021-11-08 02:15:23 +01:00
Tobias Geerinckx-Rice
55bdb2b33b
gnu: libebur128: Update to 1.2.6. 
* gnu/packages/audio.scm (libebur128): Update to 1.2.6.
 2021-11-08 02:15:23 +01:00
Ricardo Wurmus
30b67fdb6a
gnu: r-tximeta: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.12.0.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
76f32aae88
gnu: r-biscuiteer: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.8.0.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
14ff65b0e8
gnu: r-omnipathr: Update to 3.2.0. 
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.2.0.
[propagated-inputs]: Add r-crayon.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
2f03e3e1ef
gnu: r-dmrseq: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.14.0.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
86a3ae96d1
gnu: r-bsseq: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.30.0.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
fd3a180b32
gnu: r-biotmle: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.18.0.
[propagated-inputs]: Remove r-dofuture and r-future.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
494379d015
gnu: r-biotip: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-biotip): Update to 1.8.0.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
b2b920b38e
gnu: r-bioqc: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.22.0.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
73ace000f4
gnu: r-bionetstat: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-bionetstat): Update to 1.14.0.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
2aebb7bfab
gnu: r-bionet: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-bionet): Update to 1.54.0.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
95c1308b4f
gnu: r-bionero: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.2.0.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
1086cfcb7f
gnu: r-biomvrcns: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.34.0.
 2021-11-07 22:34:59 +00:00
Ricardo Wurmus
bb98b978c3
gnu: r-biomvcclass: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.62.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
739c420d1e
gnu: r-mvcclass: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.68.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
29f14a86bf
gnu: r-biomformat: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.22.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
1503c74ce0
gnu: r-biodb: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.2.0.
[propagated-inputs]: Add r-biocfilecache.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
dbfdfecfd1
gnu: r-biocdockermanager: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-biocdockermanager): Update to 1.6.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
79285bf0da
gnu: r-biocthis: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.4.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
a7a77af71a
gnu: r-basilisk: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.6.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
fd0d144044
gnu: r-basilisk-utils: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.6.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
c91514edd1
gnu: r-dir-expiry: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-dir-expiry): Update to 1.2.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
c14f5bd30a
gnu: r-genetclassifier: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.34.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
b8394117f9
gnu: r-minet: Update to 3.52.0. 
* gnu/packages/bioconductor.scm (r-minet): Update to 3.52.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
6cec550e20
gnu: r-biobtreer: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-biobtreer): Update to 1.6.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
b223a11c41
gnu: r-bgeedb: Update to 2.20.0. 
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.20.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
bdb55dcdf7
gnu: r-bgeecall: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.10.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
744c9f4351
gnu: r-beclear: Update to 2.10.0. 
* gnu/packages/bioconductor.scm (r-beclear): Update to 2.10.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
8dd33b890a
gnu: r-megadepth: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.4.0.
 2021-11-07 22:34:58 +00:00
Ricardo Wurmus
7ed7b40b18
gnu: r-ballgown: Update to 2.26.0. 
* gnu/packages/bioconductor.scm (r-ballgown): Update to 2.26.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus
558abe3b47
gnu: r-sushi: Update to 1.31.0. 
* gnu/packages/bioconductor.scm (r-sushi): Update to 1.31.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus
c7641e4327
gnu: r-guitar: Update to 2.10.0. 
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.10.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus
97c0e316d3
gnu: r-chromstar: Update to 1.19.0. 
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.19.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus
41c4e6391d
gnu: r-snpstats: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.44.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus
ce510880ec
gnu: r-pathview: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.34.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus
a8fb8beb31
gnu: r-ldblock: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.24.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus
7b6b39bd97
gnu: r-kegggraph: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-kegggraph): Update to 1.54.0.
 2021-11-07 22:34:57 +00:00
Ricardo Wurmus
ab00f1b61c
gnu: r-gwascat: Update to 2.26.0. 
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.26.0.
 2021-11-07 22:34:57 +00:00