Commit graph

114213 commits

Author SHA1 Message Date
Ricardo Wurmus 29f1477229
gnu: r-experimenthub: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.8.0.
[propagated-inputs]: Remove r-curl.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus d0682c7c04
gnu: r-biocviews: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.68.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus 0c2009a1b0
gnu: r-biocstyle: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.28.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus d277f69643
gnu: r-biocgraph: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.62.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus b5133a0dc3
gnu: r-bioccheck: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.36.0.
[propagated-inputs]: Add r-biocfilecache.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus 81de52f013
gnu: r-biocbaseutils: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-biocbaseutils): Update to 1.2.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus 39defa2968
gnu: r-ebarrays: Update to 2.64.0.
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.64.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus f7e7bb2007
gnu: r-reactomepa: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.44.0.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus 2474b005cd
gnu: r-graphite: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.46.0.
[native-inputs]: Add r-r-rsp.
2023-04-29 20:28:05 +02:00
Ricardo Wurmus b6350013f8
gnu: r-biobroom: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.32.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 9adef62a5b
gnu: r-bioassayr: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.38.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 29944820e1
gnu: r-fmcsr: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-fmcsr): Update to 1.42.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 89fce342bb
gnu: r-chemminer: Update to 3.52.0.
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.52.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 02451fb098
gnu: r-bigpint: Update to 1.15.0.
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.15.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus d3f1ba4bf2
gnu: r-biggr: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.36.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus c0b7b4ed00
gnu: r-hyperdraw: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.52.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 7f03f14e5f
gnu: r-hypergraph: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.72.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus c6354be8c6
gnu: r-rsbml: Update to 2.58.0.
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.58.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 7d2852ed0e
gnu: r-bifet: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.20.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus f273e6f729
gnu: r-bicare: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.58.0.
[propagated-inputs]: Add r-go-db.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 807271f5b5
gnu: r-bhc: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.52.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 90fc4b4a51
gnu: r-bgx: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.66.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus ee4f843e46
gnu: r-bgmix: Update to 1.59.0.
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.59.0.
[arguments]: Add build phase 'avoid-naming-conflict.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus e8d5475045
gnu: r-acde: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-acde): Update to 1.30.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 89a1bc74ce
gnu: r-acme: Update to 2.56.0.
* gnu/packages/bioconductor.scm (r-acme): Update to 2.56.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus f09fd77618
gnu: r-acgh: Update to 1.78.0.
* gnu/packages/bioconductor.scm (r-acgh): Update to 1.78.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 9b4ebaec75
gnu: r-ace: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-ace): Update to 1.18.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus b212b9ca62
gnu: r-universalmotif: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.18.0.
[propagated-inputs]: Add r-matrixgenerics.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 47b35d3459
gnu: r-unifiedwmwqpcr: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.36.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus f7c2c248d5
gnu: r-htqpcr: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.54.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus b352e03d83
gnu: r-variancepartition: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.30.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus c1b48012e6
gnu: r-variantfiltering: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.36.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 9340b270f7
gnu: r-tilingarray: Update to 1.78.0.
* gnu/packages/bioconductor.scm (r-tilingarray): Update to 1.78.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus d04f67f677
gnu: r-wavcluster: Update to 2.34.0.
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.34.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 77d55ff8e6
gnu: r-reqon: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.46.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 5d99ad4da4
gnu: r-seqbias: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.48.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 3dd7d3bf9e
gnu: r-bigmelon: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.26.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 2d821f86cb
gnu: r-gdsfmt: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.36.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 217c1275ac
gnu: r-watermelon: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-watermelon): Update to 2.6.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 69ed0c145f
gnu: r-roc: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-roc): Update to 1.76.0.
2023-04-29 20:28:04 +02:00
Ricardo Wurmus 733b8a2e0d
gnu: r-genie3: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.22.0.
2023-04-29 20:28:03 +02:00
Ricardo Wurmus a6361a752d
gnu: r-circrnaprofiler: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-circrnaprofiler): Update to 1.14.0.
2023-04-29 20:28:03 +02:00
Ricardo Wurmus 52fd33e996
gnu: r-cicero: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.18.0.
2023-04-29 20:28:03 +02:00
Ricardo Wurmus 3481a56a13
gnu: r-chicago: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-chicago): Update to 1.28.0.
2023-04-29 20:28:03 +02:00
Ricardo Wurmus 44aeef066d
gnu: r-rcistarget: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.20.0.
2023-04-29 20:28:03 +02:00
Ricardo Wurmus c5aba0be7c
gnu: r-depecher: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.16.0.
2023-04-29 20:28:03 +02:00
Ricardo Wurmus 043d2dd022
gnu: r-mixomics: Update to 6.24.0.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.24.0.
2023-04-29 20:28:03 +02:00
Ricardo Wurmus afb011a051
gnu: r-flowsom: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-flowsom): Update to 2.8.0.
[propagated-inputs]: Remove r-cytoml, r-flowworkspace, r-ggpointdensity, r-ggrepel,
r-pheatmap, r-rcolorbrewer, and r-scattermore.
2023-04-29 20:28:03 +02:00
Ricardo Wurmus 974dba4509
gnu: r-cytoml: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.12.0.
[inputs]: Remove zlib.
[propagated-inputs]: Remove r-base64enc, r-corpcor, r-lattice, r-plyr, r-rcpp,
r-rcpparmadillo, r-rcppparallel, r-runit, and r-xml2; add r-cpp11.
2023-04-29 20:28:03 +02:00
Ricardo Wurmus 43b33d7992
gnu: r-opencyto: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.12.0.
2023-04-29 20:28:03 +02:00