TakeV/guix
1
0
Fork 0
Code Issues Pull requests Packages Projects Releases Wiki Activity
54137 commits 102 branches 35 tags 561 MiB
Commit graph

54137 commits

This branch
This branch
All branches
Author SHA1 Message Date
John Soo 27f158ef23
gnu: rust-serde-1.0: Update to 1.0.104. 
* gnu/packages/crates-io.scm (rust-serde-1.0): Update to 1.0.104.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:52 +02:00
John Soo 30b36e524a
gnu: Add rust-dirs-2.0. 
* gnu/packages/crates-io.scm (rust-dirs-2.0): New variable.
(rust-dirs-1.0): Inherit from rust-dirs-2.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:52 +02:00
John Soo 39bb7b29d9
gnu: Add rust-regex-1.3. 
* gnu/packages/crates-io.scm (rust-regex-1.3): New variable.
(rust-regex-1.1): Inherit from rust-regex-1.3.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:52 +02:00
John Soo 04020a73b3
gnu: Add rust-handlebars-2.0. 
* gnu/packages/crates-io.scm (rust-handlebars-2.0): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-01-21 16:23:48 +02:00
Ludovic Courtès b2f948be9f
services: sane: Create the "scanner" account. 
* gnu/services/desktop.scm (%sane-accounts, sane-service-type): New
variables.
(%desktop-services): Use SANE-SERVICE-TYPE instead of 'simple-service'.
* doc/guix.texi (Desktop Services): Document 'sane-service-type'.
 2020-01-21 15:01:46 +01:00
Ludovic Courtès 5dc6d5ce99
gnu: upower: Install 'dbus-1/system.d/org.freedesktop.UPower.conf' to etc/. 
Fixes <https://bugs.gnu.org/39203>.
Reported by Jesse Gibbons <jgibbons2357@gmail.com>.

* gnu/packages/gnome.scm (upower)[source]: Add 'modules' and 'snippet'.
 2020-01-21 15:01:46 +01:00
Tobias Geerinckx-Rice a19fb6a436
gnu: Use HTTPS for (gnu packages bioinformatics) home pages. 
* gnu/packages/bioinformatics (bamm, ribodiff, python-biopython)
(discrover, hisat, hisat2, htseq, fastqc, htslib, python2-pbcore, roary)
(sortmerna, r-qtl, multiqc, r-deseq, r-fastseg, sambamba, trim-galore)
(gess, kentutils, bismark, kallisto, sailfish, python-hicexplorer)
(pplacer, python2-checkm-genome, r-velocyto)[home-page]: Use HTTPS.
 2020-01-21 02:15:32 +01:00
Tobias Geerinckx-Rice 72607005e4
gnu: r-gage: Update home page. 
* gnu/packages/bioinformatics.scm (r-gage)[home-page]: Update.
 2020-01-21 02:15:32 +01:00
Tobias Geerinckx-Rice 0388046068
gnu: sra-tools: Update home page. 
* gnu/packages/bioinformatics.scm (sra-tools)[home-page]: Update.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice 0eeaf1ac3c
gnu: raxml: Update home page. 
* gnu/packages/bioinformatics.scm (raxml)[home-page]: Update.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice 5832b88c45
gnu: prodigal: Update home page. 
* gnu/packages/bioinformatics.scm (prodigal)[home-page]: Use source code repository as home page.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice 030fe2fb7e
gnu: miso: Update home page. 
* gnu/packages/bioinformatics.scm (miso)[home-page]: Update.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice b725655fce
gnu: grit: Update home page. 
* gnu/packages/bioinformatics.scm (grit)[home-page]: Use source code
repository as home page.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice b56f2b6366
gnu: express-beta-diversity: Update home page. 
The original is not coming back:
<https://github.com/dparks1134/ExpressBetaDiversity/issues/11>.

* gnu/packages/bioinformatics.scm (express-beta-diversity)[home-page]:
Use source code repository as home page.
 2020-01-21 02:15:31 +01:00
Tobias Geerinckx-Rice 568bd2e382
gnu: dendropy: Update home page. 
* gnu/packages/bioinformatics.scm (dendropy)[home-page]: Update.
 2020-01-21 02:15:31 +01:00
Julien Lepiller 5aa573d8c7
gnu: ocaml-markup: Update to 0.8.2. 
gnu/packages/ocaml.scm (ocaml-markup): Update to 0.8.2.
 2020-01-21 01:12:26 +01:00
Julien Lepiller 16829d3b8a
gnu: ocaml-lwt: Update to 5.1.1. 
* gnu/packages/ocaml.scm (ocaml-lwt): update to 5.1.1.
 2020-01-21 01:12:05 +01:00
Julien Lepiller 2624921a64
gnu: Add ocaml-mmap. 
* gnu/packages/ocaml.scm (ocaml-mmap): New variable.
 2020-01-21 01:11:39 +01:00
Julien Lepiller 2e038f36f8
gnu: ocaml-bisect-ppx: Update to 1.4.2. 
* gnu/packages/ocaml.scm (ocaml-bisect-ppx): Update to 1.4.2.
 2020-01-21 01:11:35 +01:00
Julien Lepiller 73e01ae456
gnu: ocaml-qtest. Update to 2.10.1. 
* gnu/packages/ocaml.scm (ocaml-qtest): Update to 2.10.1.
 2020-01-21 01:11:31 +01:00
Julien Lepiller 795cf2a3b5
gnu: ocaml-qcheck: Update to 0.12. 
* gnu/packages/ocaml.scm (ocaml-qcheck): Update to 0.12.
 2020-01-21 01:11:20 +01:00
Julien Lepiller c2eb8c7ef7
gnu: camlp5: Update to 7.10. 
* gnu/packages/ocaml.scm (camlp5): Upadte to 7.10.
 2020-01-21 01:10:49 +01:00
Julien Lepiller efeda080ef
gnu: opam: Update to 2.0.6. 
* gnu/pckages/ocaml.scm (opam): Update to 2.0.6.
 2020-01-21 01:10:42 +01:00
Tobias Geerinckx-Rice 99db6db7be
gnu: Use HTTPS for bioconductor.org. 
* gnu/packages/bioinformatics.scm (r-homo-sapiens)[source]: Use HTTPS.
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9-masked,
r-cghcall, r-diffbind, r-cghbase, r-ripseeker, r-chippeakanno,
r-qdnaseq, r-marray, r-multtest)[home-page]: Likewise.
* gnu/packages/graph.scm (r-rgraphviz)[home-page]: Likewise.
 2020-01-21 00:43:39 +01:00
Tobias Geerinckx-Rice 570b89f401
gnu: gzdoom: Update to 4.3.2. 
* gnu/packages/games.scm (gzdoom): Update to 4.3.2.
[source]: Use GIT-FETCH and GIT-FILE-NAME.  Apply system libgme patch.
Update snippet.
[arguments]: Allow system libgme.  Update substitution file names.
[inputs]: Use fluidsynth@2.
* gnu/packages/patches/gzdoom-find-system-libgme.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2020-01-21 00:43:24 +01:00
Tobias Geerinckx-Rice 21e733ce4e
gnu: supercollider: Update to 3.10.4. 
* gnu/packages/audio.scm (supercollider): Update to 3.10.4.
[source]: Remove patch.
* gnu/packages/patches/supercollider-boost-1.70-build-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2020-01-21 00:43:24 +01:00
Ricardo Wurmus fa730a9780
Revert "gnu: Add guile3.0-commonmark." 
This reverts commit 346386f3f7.

A Guile 3.0 variant had already been added with commit
1fa3423236.
 2020-01-21 00:05:50 +01:00
Ricardo Wurmus 77c95ee60c
gnu: Add guile3.0-pfds. 
* gnu/packages/guile-xyz.scm (guile3.0-pfds): New variable.
 2020-01-20 23:49:53 +01:00
Ricardo Wurmus b0b725ed40
gnu: Add guile3.0-wisp. 
* gnu/packages/guile-xyz.scm (guile3.0-wisp): New variable.
 2020-01-20 23:49:53 +01:00
Ricardo Wurmus 346386f3f7
gnu: Add guile3.0-commonmark. 
* gnu/packages/guile-xyz.scm (guile3.0-commonmark): New variable.
(guile-commonmark)[arguments]: Patch configure file.
 2020-01-20 23:49:52 +01:00
Ludovic Courtès 37eda8c044
installer: Disable F12 hot key. 
Fixes <https://bugs.gnu.org/38562>.
Reported by Brice Waegeneire <brice@waegenei.re>.

Previously, pressing F12 or shift-F2 in one of those forms would cause
it to exit, usually with the default value #t because the caller had not
provided a useful hotkey "callback".

* gnu/installer/newt/page.scm (run-input-page, run-confirmation-page)
(run-listbox-selection-page, run-checkbox-tree-page)
(run-file-textbox-page): Pass #:flags FLAG-NOF12 to 'make-form'.
 2020-01-20 23:21:00 +01:00
Ludovic Courtès 48659aa221
installer: Makes sure the installer proceeds after hitting "Edit". 
Fixes <https://bugs.gnu.org/39199>.
Reported by Jonathan Brielmaier <jonathan.brielmaier@web.de>.

* gnu/installer/newt/page.scm (run-file-textbox-page): Move 'loop' to
the beginning of the body.  Do not call 'loop' from the 'dynamic-wind'
exit handler as we would not return the value of the second call to
'loop'.
 2020-01-20 23:20:59 +01:00
Marius Bakke 25623647e9
gnu: guile-git: Update to 0.3.0. 
* gnu/packages/guile.scm (guile-git): Update to 0.3.0.
[source]: Download tarball with URL-FETCH.
[source](file-name, modules, snippet): Remove.
[native-inputs]: Remove AUTOCONF, AUTOMAKE and TEXINFO.
 2020-01-20 21:53:53 +01:00
Marius Bakke 89595f98d0
gnu: qt@4: Build with libjpeg-turbo. 
* gnu/packages/qt.scm (qt-4)[inputs]: Change from LIBJPEG-8 to LIBJPEG-TURBO.
 2020-01-20 21:53:52 +01:00
Marius Bakke 96738cb11f
gnu: stepmania: Build with libjpeg-turbo. 
* gnu/packages/games.scm (stepmania)[inputs]: Change from LIBJPEG-8 to
LIBJPEG-TURBO.
 2020-01-20 21:53:52 +01:00
Marius Bakke 7b24b76b98
gnu: mame: Build with libjpeg-turbo. 
* gnu/packages/emulators.scm (mame)[inputs]: Change from LIBJPEG-8 to
LIBJPEG-TURBO.
 2020-01-20 21:53:52 +01:00
Marius Bakke 43987c977c
gnu: mailutils: Update to 3.8. 
* gnu/packages/mail.scm (mailutils): Update to 3.8.
[arguments]: Adjust substitutions.
 2020-01-20 21:53:52 +01:00
Marius Bakke 37f4454734
gnu: xorg-server: Update to 1.20.7. 
* gnu/packages/xorg.scm (xorg-server): Update to 1.20.7.
 2020-01-20 21:53:52 +01:00
Marius Bakke d18116d9b5
gnu: libsrtp: Build shared library. 
* gnu/packages/telephony.scm (libsrtp)[arguments]: Add #:phases.
 2020-01-20 21:53:52 +01:00
Marius Bakke 80af75abcf
gnu: libsrtp: Update to 2.3.0. 
* gnu/packages/telephony.scm (libsrtp): Update to 2.3.0.
 2020-01-20 21:53:52 +01:00
Marius Bakke fd4b27e4e4
gnu: ffmpeg: Update to 4.2.2. 
* gnu/packages/video.scm (ffmpeg): Update to 4.2.2.
 2020-01-20 21:53:51 +01:00
Marius Bakke 0fd80a2556
gnu: libvpx: Update to 1.8.2. 
* gnu/packages/video.scm (libvpx): Update to 1.8.2.
 2020-01-20 21:53:51 +01:00
Marius Bakke bb06336e81
gnu: re2: Update to 2020-01-01. 
* gnu/packages/regex.scm (re2): Update to 2020-01-01.
 2020-01-20 21:53:51 +01:00
Marius Bakke 07b1d40899
gnu: e2fsprogs: Update to 1.45.5. 
* gnu/packages/linux.scm (e2fsprogs): Update to 1.45.5.
 2020-01-20 21:53:51 +01:00
Marius Bakke a5407c768d
gnu: snappy: Update to 1.1.8. 
* gnu/packages/compression.scm (snappy): Update to 1.1.8.
 2020-01-20 21:53:51 +01:00
Marius Bakke ae3909eb4c
gnu: python-parameterized: Update to 0.7.1. 
* gnu/packages/patches/python2-parameterized-docstring-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/check.scm (python-parameterized): Update to 0.7.1.
[arguments]: Remove #:tests?.  Add #:phases to override 'check' phase.
[native-inputs]: Add PYTHON-MOCK and PYTHON-NOSE.
[properties]: New field.
(python2-parameterized)[source](patches): New field.
 2020-01-20 21:53:51 +01:00
Marius Bakke 544ea9c2df
gnu: Add python-anytree. 
* gnu/packages/python-xyz.scm (python-anytree): New public variable.
 2020-01-20 21:53:51 +01:00
Marius Bakke 20bf58bff4
gnu: python-packaging: Add comment about upstream patch status. 
* gnu/packages/python-xyz.scm (python-packaging)[source]: Add comment, to
prevent needless rebuild by updating the patch directly.
 2020-01-20 21:53:50 +01:00
Christopher Baines aa10ad7d46
gnu: guix-data-service: Update to 0.0.1-17.bf25a8d. 
* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-17.bf25a8d.
 2020-01-20 20:32:24 +00:00
Christopher Baines b3e28b5ef5
tests: mail: Remove %getmail-os from the bottom of the file. 
This was left over when debugging the system test.

* gnu/tests/mail.scm: Remove %getmail-os from the bottom of the file.
 2020-01-20 19:13:17 +00:00