gnu: Add r-badregionfinder.
* gnu/packages/bioconductor.scm (r-badregionfinder): New variable.
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@ -2428,6 +2428,33 @@ (define-public r-bader
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can be used for further down-stream analyses such as gene set enrichment.")
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(license license:gpl2)))
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(define-public r-badregionfinder
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(package
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(name "r-badregionfinder")
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(version "1.24.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "BadRegionFinder" version))
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(sha256
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(base32
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"1a1pqmh5ak9s3k1lxw6flanchk24zyznwm34ixi2b78wdc3hqgm9"))))
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(properties `((upstream-name . "BadRegionFinder")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-biomart
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r-genomicranges
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r-rsamtools
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r-s4vectors
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r-variantannotation))
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(home-page "https://bioconductor.org/packages/BadRegionFinder")
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(synopsis "Identifying regions with bad coverage in sequence alignment data")
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(description
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"BadRegionFinder is a package for identifying regions with a bad,
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acceptable and good coverage in sequence alignment data available as bam
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files. The whole genome may be considered as well as a set of target regions.
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Various visual and textual types of output are available.")
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(license license:lgpl3)))
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(define-public r-biocversion
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(package
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(name "r-biocversion")
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