gnu: python-upsetplot: Update to 0.6.0.

* gnu/packages/python-science.scm (python-upsetplot): Update to 0.6.0.
[source](modules, snippet): New fields.
[arguments]: Remove obsolete phase.  Respect TESTS? in check phase.
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Marius Bakke 2022-01-21 22:40:47 +01:00
parent 4f6cbc0aee
commit b2faad4bd0
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@ -675,26 +675,31 @@ (define-public python-statannot
(define-public python-upsetplot (define-public python-upsetplot
(package (package
(name "python-upsetplot") (name "python-upsetplot")
(version "0.4.1") (version "0.6.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "UpSetPlot" version)) (uri (pypi-uri "UpSetPlot" version))
(sha256 (sha256
(base32 (base32
"0kwljcmsvrxm33y3ssham2bwv4a5m31mv96y9h18va0cv7s3mqn1")))) "11zrykwnb00w5spx4mnsnm0f9gwrphdczainpmwkyyi50vipaa2l"))
(modules '((guix build utils)))
(snippet
;; Patch for compatibility with newer setuptools:
;; https://github.com/jnothman/UpSetPlot/pull/178
'(substitute* "upsetplot/data.py"
(("import distutils")
"from distutils.version import LooseVersion")
(("if distutils\\.version\\.LooseVersion")
"if LooseVersion")))))
(build-system python-build-system) (build-system python-build-system)
(arguments (arguments
`(#:phases '(#:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(add-after 'unpack 'fix-versioning
(lambda _
(substitute* "setup.py"
(("pytest-cov<2.6") "pytest-cov"))))
(replace 'check (replace 'check
(lambda* (#:key inputs outputs #:allow-other-keys) (lambda* (#:key tests? #:allow-other-keys)
(add-installed-pythonpath inputs outputs) (when tests?
(invoke "pytest" "-v" "--doctest-modules")))))) (invoke "pytest" "-v" "--doctest-modules")))))))
(propagated-inputs (propagated-inputs
(list python-matplotlib python-pandas)) (list python-matplotlib python-pandas))
(native-inputs (native-inputs