gnu: Add python-htsget.
* gnu/packages/bioinformatics.scm (python-htsget): New variable.
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@ -846,6 +846,30 @@ (define-public bioawk
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intended to behave exactly the same as the original BWK awk.")
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intended to behave exactly the same as the original BWK awk.")
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(license license:x11)))
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(license license:x11)))
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(define-public python-htsget
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(package
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(name "python-htsget")
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(version "0.2.5")
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(source (origin
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(method url-fetch)
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(uri (pypi-uri "htsget" version))
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(sha256
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(base32
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"0ic07q85vhw9djf23k57b21my7i5xp400m8gfqgr5gcryqvdr0yk"))))
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(build-system python-build-system)
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(native-inputs
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`(("python-setuptools-scm" ,python-setuptools-scm)))
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(propagated-inputs
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`(("python-humanize" ,python-humanize)
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("python-requests" ,python-requests)
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("python-six" ,python-six)))
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(home-page "https://pypi.org/project/htsget/")
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(synopsis "Python API and command line interface for the GA4GH htsget API")
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(description "This package is a client implementation of the GA4GH htsget
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protocol. It provides a simple and reliable way to retrieve genomic data from
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servers supporting the protocol.")
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(license license:asl2.0)))
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(define-public python-pybedtools
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(define-public python-pybedtools
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(package
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(package
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(name "python-pybedtools")
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(name "python-pybedtools")
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