gnu: Add r-activepathways.
* gnu/packages/bioconductor.scm (r-activepathways): New variable.
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@ -6093,3 +6093,33 @@ (define-public r-activedriverwgs
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human genome. ActiveDriverWGS detects coding and noncoding driver elements
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using whole genome sequencing data.")
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(license license:gpl3)))
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;; This is a CRAN package, but it depends on Bioconductor packages, so we put
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;; it here.
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(define-public r-activepathways
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(package
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(name "r-activepathways")
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(version "1.0.1")
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(source
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(origin
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(method url-fetch)
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(uri (cran-uri "ActivePathways" version))
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(sha256
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(base32
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"1xb0d1svmzw404pv8ja6wr4773k7x2lxkrzrayilvzqbfzj1wx20"))))
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(properties
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`((upstream-name . "ActivePathways")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-data-table" ,r-data-table)
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("r-ggplot2" ,r-ggplot2)
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("r-metap" ,r-metap)))
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(home-page "https://cran.r-project.org/web/packages/ActivePathways/")
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(synopsis "Multivariate pathway enrichment analysis")
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(description
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"This package represents an integrative method of analyzing multi omics
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data that conducts enrichment analysis of annotated gene sets. ActivePathways
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uses a statistical data fusion approach, rationalizes contributing evidence
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and highlights associated genes, improving systems-level understanding of
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cellular organization in health and disease.")
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(license license:gpl3)))
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