gnu: r-erma: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-erma): Move from here... * gnu/packages/bioconductor.scm (r-erma): ...to here.
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@ -9241,6 +9241,46 @@ (define-public r-catalyst
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standards, ii) single-cell deconvolution, and iii) bead-based compensation.")
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(license license:gpl2+)))
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(define-public r-erma
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(package
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(name "r-erma")
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(version "1.6.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "erma" version))
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(sha256
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(base32
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"1k2j1xhv0vwn45xmh8ds0gz812px5hnpgzvp37ngsdn4j5ai1l0k"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-annotationdbi" ,r-annotationdbi)
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("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-biocparallel" ,r-biocparallel)
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("r-genomeinfodb" ,r-genomeinfodb)
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("r-genomicfiles" ,r-genomicfiles)
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("r-genomicranges" ,r-genomicranges)
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("r-ggplot2" ,r-ggplot2)
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("r-homo-sapiens" ,r-homo-sapiens)
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("r-iranges" ,r-iranges)
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("r-rtracklayer" ,r-rtracklayer)
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("r-s4vectors" ,r-s4vectors)
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("r-shiny" ,r-shiny)
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("r-summarizedexperiment" ,r-summarizedexperiment)))
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(native-inputs
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`(("r-knitr" ,r-knitr)))
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(home-page "https://bioconductor.org/packages/erma")
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(synopsis "Epigenomic road map adventures")
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(description
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"The epigenomics road map describes locations of epigenetic marks in DNA
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from a variety of cell types. Of interest are locations of histone
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modifications, sites of DNA methylation, and regions of accessible chromatin.
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This package presents a selection of elements of the road map including
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metadata and outputs of the ChromImpute procedure applied to ENCODE cell lines
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by Ernst and Kellis.")
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(license license:artistic2.0)))
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(define-public r-gqtlstats
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(package
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(name "r-gqtlstats")
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@ -10655,46 +10655,6 @@ (define-public r-homo-sapiens
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several related annotation packages.")
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(license license:artistic2.0)))
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(define-public r-erma
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(package
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(name "r-erma")
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(version "1.6.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "erma" version))
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(sha256
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(base32
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"1k2j1xhv0vwn45xmh8ds0gz812px5hnpgzvp37ngsdn4j5ai1l0k"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-annotationdbi" ,r-annotationdbi)
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("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-biocparallel" ,r-biocparallel)
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("r-genomeinfodb" ,r-genomeinfodb)
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("r-genomicfiles" ,r-genomicfiles)
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("r-genomicranges" ,r-genomicranges)
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("r-ggplot2" ,r-ggplot2)
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("r-homo-sapiens" ,r-homo-sapiens)
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("r-iranges" ,r-iranges)
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("r-rtracklayer" ,r-rtracklayer)
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("r-s4vectors" ,r-s4vectors)
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("r-shiny" ,r-shiny)
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("r-summarizedexperiment" ,r-summarizedexperiment)))
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(native-inputs
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`(("r-knitr" ,r-knitr)))
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(home-page "https://bioconductor.org/packages/erma")
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(synopsis "Epigenomic road map adventures")
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(description
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"The epigenomics road map describes locations of epigenetic marks in DNA
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from a variety of cell types. Of interest are locations of histone
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modifications, sites of DNA methylation, and regions of accessible chromatin.
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This package presents a selection of elements of the road map including
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metadata and outputs of the ChromImpute procedure applied to ENCODE cell lines
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by Ernst and Kellis.")
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(license license:artistic2.0)))
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(define-public r-dropbead
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(let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247")
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(revision "2"))
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