#+TITLE: Org layer

#+TAGS: emacs|layer

[[file:img/org.png]]

* Table of Contents                     :TOC_5_gh:noexport:
- [[#description][Description]]
  - [[#features][Features:]]
- [[#bibtex][BibTeX]]
- [[#important-note][Important Note]]
- [[#install][Install]]
  - [[#layer][Layer]]
  - [[#github-support][Github support]]
  - [[#twitter-bootstrap-support][Twitter Bootstrap support]]
  - [[#gnuplot-support][Gnuplot support]]
  - [[#revealjs-support][Reveal.js support]]
  - [[#org-journal-support][Org-journal support]]
  - [[#hugo-support][Hugo support]]
  - [[#trello-support][Trello support]]
  - [[#different-bullets][Different bullets]]
  - [[#project-support][Project support]]
  - [[#org-brain-support][Org-brain support]]
  - [[#mode-line-support][Mode line support]]
  - [[#sticky-header-support][Sticky header support]]
  - [[#epub-support][Epub support]]
  - [[#jira-support][Jira support]]
- [[#key-bindings][Key bindings]]
  - [[#starting-org-mode][Starting org-mode]]
  - [[#toggles][Toggles]]
  - [[#org-mode][Org-mode]]
  - [[#org-with-evil-org-mode][Org with evil-org-mode]]
  - [[#tables][Tables]]
  - [[#trees][Trees]]
  - [[#element-insertion][Element insertion]]
  - [[#links][Links]]
  - [[#babel--source-blocks][Babel / Source Blocks]]
    - [[#org-babel-transient-state][Org Babel Transient State]]
  - [[#emphasis][Emphasis]]
  - [[#navigating-in-calendar][Navigating in calendar]]
  - [[#capture-buffers-and-src-blocks][Capture buffers and src blocks]]
  - [[#org-agenda][Org agenda]]
    - [[#key-bindings-1][Key bindings]]
    - [[#org-agenda-transient-state][Org agenda transient state]]
  - [[#pomodoro][Pomodoro]]
  - [[#presentation][Presentation]]
  - [[#helm-org-rifle][Helm-org-rifle]]
  - [[#org-projectile][Org-projectile]]
  - [[#org-journal][Org-journal]]
  - [[#org-brain][Org-brain]]
    - [[#application-bindings][Application bindings]]
    - [[#org-mode-bindings][org-mode bindings]]
    - [[#visualization-bindings][Visualization bindings]]
  - [[#org-jira][Org-jira]]

* Description
This layer enables [[http://orgmode.org/][org mode]] for Spacemacs.

** Features:
- Vim inspired key bindings are provided by [[https://github.com/Somelauw/evil-org-mode][evil-org-mode]]
- Nicer bullet via [[https://github.com/sabof/org-bullets][org-bullets]]
- A [[https://cirillocompany.de/pages/pomodoro-technique][pomodoro method]] integration via [[https://github.com/lolownia/org-pomodoro][org-pomodoro]]
- Presentation mode via [[https://github.com/rlister/org-present][org-present]]
- Insertion of images via [[https://github.com/abo-abo/org-download][org-download]]
- Project-specific TODOs via [[https://github.com/IvanMalison/org-projectile][org-projectile]]
- Easy insert of URLs from clipboard with org format via [[https://github.com/rexim/org-cliplink][org-cliplink]]

* BibTeX
For more extensive support of references through BibTeX files, have a look at
the [[https://github.com/syl20bnr/spacemacs/blob/develop/layers/+lang/bibtex/README.org][BibTeX layer]].

* Important Note
Since version 0.104, spacemacs uses the =org= version from the =org= ELPA
repository instead of the one shipped with emacs. Then, any =org= related code
should not be loaded before =dotspacemacs/user-config=, otherwise both versions
will be loaded and will conflict.

Because of autoloading, calling to =org= functions will trigger the loading up
of the =org= shipped with emacs which will induce conflicts.
One way to avoid conflict is to wrap your =org= config code in a
=with-eval-after-load= block like this:

#+BEGIN_SRC emacs-lisp
  (with-eval-after-load 'org
    ;; here goes your Org config :)
    ;; ....
    )
#+END_SRC

Please also note that everything described here only applies if you install this
layer instead of manually loading =org= as separate emacs package.

If this is not done you will encounter a lot of unbind key exceptions while working with org.
More details can be found [[https://github.com/syl20bnr/spacemacs/issues/8106][here]].

* Install
** Layer
To use this configuration layer: in the main Spacemacs configuration
file (=~/.spacemacs=), to the existing =dotspacemacs-configuration-layers= list
add the =org= entry.

** Github support
To install Github related extensions like [[https://github.com/larstvei/ox-gfm][ox-gfm]] to export to Github
flavored markdown set the variable =org-enable-github-support= to =t=.

#+BEGIN_SRC emacs-lisp
  (setq-default dotspacemacs-configuration-layers '(
    (org :variables org-enable-github-support t)))
#+END_SRC

** Twitter Bootstrap support
To enable the export to Twitter Bootstrap-formatted HTML - set
the variable =org-enable-bootstrap-support= to =t=.
This would install the [[https://github.com/marsmining/ox-twbs][ox-twbs]] extension.

#+BEGIN_SRC emacs-lisp
  (setq-default dotspacemacs-configuration-layers '(
    (org :variables
         org-enable-bootstrap-support t)))
#+END_SRC

** Gnuplot support
Org-mode supports the plotting of data within tables through [[http://www.gnuplot.info/][Gnuplot]] as
demonstrated [[http://orgmode.org/worg/org-tutorials/org-plot.html][here]].

Unfortunately, this is [[https://github.com/bruceravel/gnuplot-mode/issues/15][not terribly well supported]] on Windows,
at this stage. To disable the configuration of gnuplot support - add
the =gnuplot= package to your =dotspacemacs-excluded-packages= variable.

** Reveal.js support
To enable the export of org files as a [[http://lab.hakim.se/reveal-js/][reveal.js]] presentation - set the
variable =org-enable-reveal-js-support= to =t=.
This would install the [[https://gitlab.com/oer/org-re-reveal/][org-re-reveal]] Emacs extension.

#+BEGIN_SRC emacs-lisp
  (setq-default dotspacemacs-configuration-layers
   '((org :variables org-enable-reveal-js-support t)))
#+END_SRC

Then the extension needs to be pointed to the =reveal.js= itself.
So [[https://github.com/hakimel/reveal.js/releases][download]] =reveal.js= and point =org-re-reveal-root= to the path,
as it described in the [[https://gitlab.com/oer/org-re-reveal#set-the-location-of-revealjs][manual]].

Alternatively, add the following line to each =.org= file you want to process:

#+BEGIN_EXAMPLE
  #+REVEAL_ROOT: https://cdn.jsdelivr.net/npm/reveal.js@3.8.0
#+END_EXAMPLE

** Org-journal support
[[https://github.com/bastibe/org-journal][org-journal]] is a simple journal management system that:
- Keeps a separate journal file for each day inside a directory
- New daily file would always migrate entries with chosen TODO states
- Has journal encryption functionality
- Easily integrates with org-agenda and Emacs calendar, iCalendar,
  allows scheduling
- Easily integrates with org-capture

To install org-journal - set the variable =org-enable-org-journal-support= to =t=.

#+BEGIN_SRC emacs-lisp
  (setq-default dotspacemacs-configuration-layers '(
    (org :variables
         org-enable-org-journal-support t)))
#+END_SRC

By default, journal files are stored in =~/Documents/journal/=. To override
this - set =org-journal-dir= variable in the =dotspacemacs/user-config=:

#+BEGIN_SRC emacs-lisp
  (setq org-journal-dir "~/org/journal/")
#+END_SRC

To change the journal file name format - alter =org-journal-file-format=:

#+BEGIN_SRC emacs-lisp
  (setq org-journal-file-format "%Y-%m-%d")
#+END_SRC

*Warning:* setting =org-journal-file-format= to include a file extension like
=%Y-%m-%d.org= would break the calendar search functionality.

By default, journal files are started with a first level heading (=*=) followed
by the date in the form set by locale. To format journal files differently:
- alter =org-journal-date-prefix= and =org-journal-date-format=.
  For example, to have new journal files created with this header:

  #+BEGIN_EXAMPLE
    #+TITLE: Tuesday, September 06 2016
  #+END_EXAMPLE

- define the following in =dotspacemacs/user-config=:

  #+BEGIN_SRC emacs-lisp
    (setq org-journal-date-prefix "#+TITLE: ")
    (setq org-journal-date-format "%A, %B %d %Y")
  #+END_SRC

The default entry is a second level heading (=** =) followed by a timestamp. If
you start your journal files with a Title as shown above you may want to adjust
entries to start at the first level heading and you may want to change or omit
the timestamp.

#+BEGIN_SRC emacs-lisp
  (setq org-journal-time-prefix "* ")
  (setq org-journal-time-format "")
#+END_SRC

Any of the org-journal settings can be configured in =dotspacemacs/user-config=
or defined alongside the layer itself.

For example:

#+CAPTION: Configure org-journal with the layer

#+BEGIN_SRC emacs-lisp
  (setq-default dotspacemacs-configuration-layers '(
    (org :variables
        org-enable-org-journal-support t
        org-journal-dir "~/org/journal/"
        org-journal-file-format "%Y-%m-%d"
        org-journal-date-prefix "#+TITLE: "
        org-journal-date-format "%A, %B %d %Y"
        org-journal-time-prefix "* "
        org-journal-time-format "")
  )
#+END_SRC

** Hugo support
To install the Org exporter [[https://ox-hugo.scripter.co][ox-hugo]] that generates [[https://gohugo.io][Hugo]] -compatible Markdown
/plus/ TOML/YAML front-matter, set the variable =org-enable-hugo-support= to
=t=.

#+BEGIN_SRC emacs-lisp
  (setq-default dotspacemacs-configuration-layers '(
    (org :variables
         org-enable-hugo-support t)))
#+END_SRC

** Trello support
To install Trello support set the variable =org-enable-trello-support= to =t=.

#+BEGIN_SRC emacs-lisp
  (setq-default dotspacemacs-configuration-layers '(
    (org :variables
         org-enable-trello-support t)))
#+END_SRC

** Different bullets
You can tweak the bullets displayed in the org buffer in the function
=dotspacemacs/user-config= of your dotfile by setting the variable
=org-bullets-bullet-list=. By default the list is set to =("◉" "○" "✸" "✿")=.

#+BEGIN_SRC emacs-lisp
  (setq org-bullets-bullet-list '("■" "◆" "▲" "▶"))
#+END_SRC

You can disable the fancy bullets entirely by adding =org-bullets= to =dotspacemacs-excluded-packages=.

#+BEGIN_SRC emacs-lisp
  (dotspacemacs-excluded-packages '(org-bullets))
#+END_SRC

** Project support
Set the layer variable =org-projectile-file= to the filename where you want to
store project-specific TODOs. If this is an absolute path, all todos will be
stored in the same file (organized by project), whereas if it is just a single
filename, todos will be stored in each project root.

#+BEGIN_SRC emacs-lisp
  (setq-default dotspacemacs-configuration-layers
    '((org :variables org-projectile-file "TODOs.org")))
#+END_SRC

The TODO files are not added to the agenda automatically. You can do this with
the following snippet.

#+BEGIN_SRC emacs-lisp
  (with-eval-after-load 'org-agenda
    (require 'org-projectile)
    (mapcar '(lambda (file)
                   (when (file-exists-p file)
                     (push file org-agenda-files)))
            (org-projectile-todo-files)))
#+END_SRC

** Org-brain support
For Emacs 25 or later, support for [[https://kungsgeten.github.io/org-brain.html][org-brain]] is included. See the [[https://github.com/Kungsgeten/org-brain][org-brain
package documentation]] for more information.

** Mode line support
To temporarily enable mode line display of org clock, press ~SPC t m c~.

To permanently enable mode line display of org clock, add this snippet to your
=dotspacemacs/user-config= function:

#+BEGIN_SRC elisp
  (setq spaceline-org-clock-p t)
#+END_SRC

** Sticky header support
To install sticky header support set the variable =org-enable-sticky-header= to =t=.

#+BEGIN_SRC emacs-lisp
  (setq-default dotspacemacs-configuration-layers '(
    (org :variables
         org-enable-sticky-header t)))
#+END_SRC

** Epub support
To install the Org exporter [[https://github.com/ofosos/ox-epub][ox-epub]] that generates e-book file format [[https://en.wikipedia.org/wiki/EPUB][epub]], set
the variable =org-enable-epub-support= to =t=.

#+BEGIN_SRC emacs-lisp
  (setq-default dotspacemacs--configuration-layers
                '((org :variables
                       org-enable-epub-support t)))
#+END_SRC

** Jira support
To bring Jira and OrgMode together over [[https://github.com/ahungry/org-jira][org-jira]] set the variable
=org-enable-jira-support= to =t=.

#+BEGIN_SRC emacs-lisp
  (setq-default dotspacemacs-configuration-layers '(
    (org :variables
         org-enable-jira-support t
         jiralib-url "https://yourcompany.atlassian.net:443")))
#+END_SRC

If you would like to avoid being prompted for your login and password each time
you connect, add your authentication credentials to =~/.authinfo.gpg= or
=~/.authinfo=:

#+BEGIN_SRC authinfo
  machine yourcompany.atlassian.net login you@example.com password yourPassword port 443
#+END_SRC

* Key bindings
** Starting org-mode

| Key binding   | Description                                                               |
|---------------+---------------------------------------------------------------------------|
| ~SPC a o #~   | org agenda list stuck projects                                            |
| ~SPC a o /~   | org occur in agenda files                                                 |
| ~SPC a o a~   | org agenda list                                                           |
| ~SPC a o c~   | org capture                                                               |
| ~SPC a o e~   | org store agenda views                                                    |
| ~SPC a o f i~ | org feed goto inbox                                                       |
| ~SPC a o f u~ | org feed update all                                                       |
| ~SPC a o C c~ | org cancel clock                                                          |
| ~SPC a o C g~ | org goto last clocked-in clock (go to specific recent clock with ~SPC u~) |
| ~SPC a o C i~ | org clock in                                                              |
| ~SPC a o C I~ | org clock in last                                                         |
| ~SPC a o C j~ | org jump to current clock                                                 |
| ~SPC a o C o~ | org clock out                                                             |
| ~SPC a o C r~ | org resolve clocks                                                        |
| ~SPC a o l~   | org store link                                                            |
| ~SPC a o m~   | org tags view                                                             |
| ~SPC a o o~   | org agenda                                                                |
| ~SPC a o s~   | org search view                                                           |
| ~SPC a o t~   | org todo list                                                             |
| ~SPC C c~     | org-capture                                                               |

** Toggles

| Key binding | Description                                   |
|-------------+-----------------------------------------------|
| ~SPC m T c~ | org-toggle-checkbox                           |
| ~SPC m T e~ | org-toggle-pretty-entities                    |
| ~SPC m T i~ | org-toggle-inline-images                      |
| ~SPC m T l~ | org-toggle-link-display                       |
| ~SPC m T t~ | org-show-todo-tree                            |
| ~SPC m T T~ | org-todo                                      |
| ~SPC m T V~ | toggle =space-doc-mode= a read-only view mode |
| ~SPC m T x~ | org-preview-latex-fragment                    |

** Org-mode

| Key binding                                  | Description                                   |
|----------------------------------------------+-----------------------------------------------|
| ~SPC m <dotspacemacs-major-mode-leader-key>~ | org-ctrl-c-ctrl-c                             |
| ~SPC m *~                                    | org-ctrl-c-star                               |
| ~SPC m RET~                                  | org-ctrl-c-ret                                |
| ~SPC m -~                                    | org-ctrl-c-minus                              |
| ~SPC m '​~                                    | org-edit-special                              |
| ~SPC m a~                                    | org-agenda                                    |
| ~SPC m A~                                    | org-attach                                    |
| ~SPC m c~                                    | org-capture                                   |
| ~SPC m C c~                                  | org-clock-cancel                              |
| ~SPC m C d~                                  | Temporarily show clock times for current file |
| ~SPC m C e~                                  | org-evaluate-time-range                       |
| ~SPC m C g~                                  | org-clock-goto                                |
| ~SPC m C i~                                  | org-clock-in                                  |
| ~SPC m C I~                                  | org-clock-in-last                             |
| ~SPC m C j~                                  | Jump to the current clock                     |
| ~SPC m C o~                                  | org-clock-out                                 |
| ~SPC m C R~                                  | Insert clock report                           |
| ~SPC m C r~                                  | org-resolve-clocks                            |
| ~SPC m d d~                                  | org-deadline                                  |
| ~SPC m d s~                                  | org-schedule                                  |
| ~SPC m d t~                                  | org-time-stamp                                |
| ~SPC m d T~                                  | org-time-stamp-inactive                       |
| ~SPC m e e~                                  | org-export-dispatch                           |
| ~SPC m e m~                                  | send current buffer as HTML email message     |
| ~SPC m f i~                                  | org-feed-goto-inbox                           |
| ~SPC m f u~                                  | org-feed-update-all                           |
| ~SPC m l~                                    | org-open-at-point                             |
| ~SPC m L~                                    | org-shiftright                                |
| ~SPC m H~                                    | org-shiftleft                                 |
| ~SPC m K~                                    | org-shiftup                                   |
| ~SPC m J~                                    | org-shiftdown                                 |
| ~SPC m C-S-l~                                | org-shiftcontrolright                         |
| ~SPC m C-S-h~                                | org-shiftcontrolleft                          |
| ~SPC m C-S-j~                                | org-shiftcontroldown                          |
| ~SPC m C-S-k~                                | org-shiftcontrolup                            |
| ~SPC s j~                                    | spacemacs/jump-in-buffer (jump to a heading)  |

** Org with evil-org-mode
Please see the [[https://github.com/Somelauw/evil-org-mode/blob/master/doc/keythemes.org][evil-org documentation]] for additional instructions on customizing
=evil-org-mode=.

| Key binding   | Description                     |
|---------------+---------------------------------|
| ~gj~ / ~gk~   | Next/previous element (heading) |
| ~gh~ / ~gl~   | Parent/child element (heading)  |
| ~gH~          | Root heading                    |
| ~ae~          | Element text object             |
| ~ar~          | Subtree text object             |
| ~M-j~ / ~M-k~ | Move heading                    |
| ~M-h~ / ~M-l~ | Promote or demote heading       |
| ~M-J~ / ~M-K~ | Move subtree                    |
| ~M-H~ / ~M-L~ | Promote or demote subtree       |
| ~>>~ / ~<<~   | Promote or demote heading       |

If the layer variable =org-want-todo-bindings= is true, the following bindings
are also available.

| Key bindings | Description                         |
|--------------+-------------------------------------|
| ~t~          | Cycle TODO state of current heading |
| ~T~          | Insert new TODO heading             |
| ~M-t~        | Insert new TODO sub-heading         |

** Tables

| Key binding   | Description                                                                |
|---------------+----------------------------------------------------------------------------|
| ~SPC m t a~   | Align the table at point by aligning all vertical bars                     |
| ~SPC m t b~   | Blank the current table field or active region                             |
| ~SPC m t c~   | Convert from =org-mode= table to table.el and back                         |
| ~SPC m t d c~ | Delete a column from the table                                             |
| ~SPC m t d r~ | Delete the current row or horizontal line from the table                   |
| ~SPC m t e~   | Replace the table field value at the cursor by the result of a calculation |
| ~SPC m t E~   | Export table to a file, with configurable format                           |
| ~SPC m t h~   | Go to the previous field in the table                                      |
| ~SPC m t H~   | Move column to the left                                                    |
| ~SPC m t i c~ | Insert a new column into the table                                         |
| ~SPC m t i h~ | Insert a horizontal-line below the current line into the table             |
| ~SPC m t i H~ | Insert a hline and move to the row below that line                         |
| ~SPC m t i r~ | Insert a new row above the current line into the table                     |
| ~SPC m t I~   | Import a file as a table                                                   |
| ~SPC m t j~   | Go to the next row (same column) in the current table                      |
| ~SPC m t J~   | Move table row down                                                        |
| ~SPC m t K~   | Move table row up                                                          |
| ~SPC m t l~   | Go to the next field in the current table, creating new lines as needed    |
| ~SPC m t L~   | Move column to the right                                                   |
| ~SPC m t n~   | Query for a size and insert a table skeleton                               |
| ~SPC m t N~   | Use the table.el package to insert a new table                             |
| ~SPC m t p~   | Plot the table using org-plot/gnuplot                                      |
| ~SPC m t r~   | Recalculate the current table line by applying all stored formulas         |
| ~SPC m t s~   | Sort table lines according to the column at point                          |
| ~SPC m t t f~ | Toggle the formula debugger in tables                                      |
| ~SPC m t t o~ | Toggle the display of Row/Column numbers in tables                         |
| ~SPC m t w~   | Wrap several fields in a column like a paragraph                           |

** Trees

| Key binding   | Description                     |
|---------------+---------------------------------|
| ~gj~ / ~gk~   | Next/previous element (heading) |
| ~gh~ / ~gl~   | Parent/child element (heading)  |
| ~gH~          | Root heading                    |
| ~ae~          | Element text object             |
| ~ar~          | Subtree text object             |
| ~M-j~ / ~M-k~ | Move heading                    |
| ~M-h~ / ~M-l~ | Promote or demote heading       |
| ~M-J~ / ~M-K~ | Move subtree                    |
| ~M-H~ / ~M-L~ | Promote or demote subtree       |
| ~>>~ / ~<<~   | Promote or demote heading       |
| ~TAB~         | org-cycle                       |
| ~SPC m s a~   | Toggle archive tag for subtree  |
| ~SPC m s A~   | Archive subtree                 |
| ~SPC m s b~   | org-tree-to-indirect-buffer     |
| ~SPC m s d~   | org-cut-subtree                 |
| ~SPC m s l~   | org-demote-subtree              |
| ~SPC m s h~   | org-promote-subtree             |
| ~SPC m s k~   | org-move-subtree-up             |
| ~SPC m s j~   | org-move-subtree-down           |
| ~SPC m s n~   | org-narrow-to-subtree           |
| ~SPC m s N~   | widen narrowed subtree          |
| ~SPC m s r~   | org-refile                      |
| ~SPC m s s~   | show sparse tree                |
| ~SPC m s S~   | sort trees                      |

** Element insertion

| Key binding   | Description                                   |
|---------------+-----------------------------------------------|
| ~C-RET~       | Insert heading at end of current subtree      |
| ~C-S-RET~     | Insert TODO heading at end of current subtree |
| ~SPC m i d~   | org-insert-drawer                             |
| ~SPC m i D s~ | Take screenshot                               |
| ~SPC m i D y~ | Yank image url                                |
| ~SPC m i e~   | org-set-effort                                |
| ~SPC m i f~   | org-insert-footnote                           |
| ~SPC m i h~   | org-insert-heading                            |
| ~SPC m i H~   | org-insert-heading-after-current              |
| ~SPC m i i~   | org-insert-item                               |
| ~SPC m i K~   | spacemacs/insert-keybinding-org               |
| ~SPC m i l~   | org-insert-link                               |
| ~SPC m i L~   | insert URL with its page title from clipboard |
| ~SPC m i n~   | org-add-note                                  |
| ~SPC m i p~   | org-set-property                              |
| ~SPC m i s~   | org-insert-subheading                         |
| ~SPC m i t~   | org-set-tags                                  |

** Links

| Key binding | Description       |
|-------------+-------------------|
| ~SPC m x o~ | org-open-at-point |

** Babel / Source Blocks

| Key binding | Description                              |
|-------------+------------------------------------------|
| ~SPC m b .~ | Enter Babel Transient State              |
| ~SPC m b a~ | org-babel-sha1-hash                      |
| ~SPC m b b~ | org-babel-execute-buffer                 |
| ~SPC m b c~ | org-babel-check-src-block                |
| ~SPC m b d~ | org-babel-demarcate-block                |
| ~SPC m b e~ | org-babel-execute-maybe                  |
| ~SPC m b f~ | org-babel-tangle-file                    |
| ~SPC m b g~ | org-babel-goto-named-src-block           |
| ~SPC m b i~ | org-babel-lob-ingest                     |
| ~SPC m b I~ | org-babel-view-src-block-info            |
| ~SPC m b j~ | org-babel-insert-header-arg              |
| ~SPC m b l~ | org-babel-load-in-session                |
| ~SPC m b n~ | org-babel-next-src-block                 |
| ~SPC m b o~ | org-babel-open-src-block-result          |
| ~SPC m b p~ | org-babel-previous-src-block             |
| ~SPC m b r~ | org-babel-goto-named-result              |
| ~SPC m b s~ | org-babel-execute-subtree                |
| ~SPC m b t~ | org-babel-tangle                         |
| ~SPC m b u~ | org-babel-goto-src-block-head            |
| ~SPC m b v~ | org-babel-expand-src-block               |
| ~SPC m b x~ | org-babel-do-key-sequence-in-edit-buffer |
| ~SPC m b z~ | org-babel-switch-to-session              |
| ~SPC m b Z~ | org-babel-switch-to-session-with-code    |

*** Org Babel Transient State
Use ~SPC m b .~ to enter a transient state for quick source block navigation and
execution. During that state, the following bindings are active:

| Key binding | Description                   |
|-------------+-------------------------------|
| ~'~         | edit source block             |
| ~e~         | execute source block          |
| ~g~         | jump to named source block    |
| ~j~         | jump to next source block     |
| ~k~         | jump to previous source block |
| ~z~         | recenter buffer in window     |
| ~q~         | leave transient state         |

** Emphasis

| Key binding | Description                |
|-------------+----------------------------|
| ~SPC m x b~ | make region bold           |
| ~SPC m x c~ | make region code           |
| ~SPC m x i~ | make region italic         |
| ~SPC m x r~ | clear region emphasis      |
| ~SPC m x s~ | make region strike-through |
| ~SPC m x u~ | make region underline      |
| ~SPC m x v~ | make region verbose        |

** Navigating in calendar

| Key binding | Description        |
|-------------+--------------------|
| ~M-l~       | One day forward    |
| ~M-h~       | One day backward   |
| ~M-j~       | One week forward   |
| ~M-k~       | One week backward  |
| ~M-L~       | One month forward  |
| ~M-H~       | One month backward |
| ~M-J~       | One year forward   |
| ~M-K~       | One year backward  |

** Capture buffers and src blocks
=org-capture-mode= and =org-src-mode= both support the confirm and abort
conventions.

| Key binding                                  | Description                            |
|----------------------------------------------+----------------------------------------|
| ~SPC m <dotspacemacs-major-mode-leader-key>~ | confirm in =org-capture-mode=          |
| ~SPC m '​~                                    | confirm in =org-src-mode=              |
| ~SPC m c~                                    | confirm                                |
| ~SPC m a~                                    | abort                                  |
| ~SPC m k~                                    | abort                                  |
| ~SPC m r~                                    | org-capture-refile in org-capture-mode |

** Org agenda
*** Key bindings
The evilified org agenda supports the following bindings:

| Key binding          | Description                       |
|----------------------+-----------------------------------|
| ~M-SPC~ or ~s-M-SPC~ | org-agenda transient state        |
| ~SPC m a~            | org-agenda                        |
| ~SPC m C c~          | org-agenda-clock-cancel           |
| ~SPC m C i~          | org-agenda-clock-in               |
| ~SPC m C o~          | org-agenda-clock-out              |
| ~SPC m C p~          | org-pomodoro (if package is used) |
| ~SPC m d d~          | org-agenda-deadline               |
| ~SPC m d s~          | org-agenda-schedule               |
| ~SPC m i e~          | org-agenda-set-effort             |
| ~SPC m i p~          | org-agenda-set-property           |
| ~SPC m i t~          | org-agenda-set-tags               |
| ~SPC m s r~          | org-agenda-refile                 |
| ~M-j~                | next item                         |
| ~M-k~                | previous item                     |
| ~M-h~                | earlier view                      |
| ~M-l~                | later view                        |
| ~gr~                 | refresh                           |
| ~gd~                 | toggle grid                       |
| ~C-v~                | change view                       |
| ~RET~                | org-agenda-goto                   |
| ~M-RET~              | org-agenda-show-and-scroll-up     |

*** Org agenda transient state
Use ~M-SPC~ or ~s-M-SPC~ in an org agenda buffer to activate its transient state.
The transient state aims to list the most useful org agenda commands and
visually organize them by category. The commands associated with each binding
are listed bellow.

| Key binding | Description         | Command                           |
|-------------+---------------------+-----------------------------------|
| Entry       |                     |                                   |
|-------------+---------------------+-----------------------------------|
| ~h:~        | set tags            | org-agenda-set-tags               |
| ~hA~        | archive             | org-agenda-archive-default        |
| ~ht~        | set status          | org-agenda-todo                   |
| ~hk~        | kill                | org-agenda-kill                   |
| ~hp~        | set priority        | org-agenda-priority               |
| ~hR~        | refile              | org-agenda-refile                 |
|-------------+---------------------+-----------------------------------|
| Visit entry |                     |                                   |
|-------------+---------------------+-----------------------------------|
| ~SPC~       | in other window     | org-agenda-show-and-scroll-up     |
| ~TAB~       | & go to location    | org-agenda-goto                   |
| ~RET~       | & del other windows | org-agenda-switch-to              |
| ~o~         | link                | link-hint-open-link               |
|-------------+---------------------+-----------------------------------|
| Filter      |                     |                                   |
|-------------+---------------------+-----------------------------------|
| ~fc~        | by category         | org-agenda-filter-by-category     |
| ~fd~        | delete all filters  | org-agenda-filter-remove-all      |
| ~fh~        | by top headline     | org-agenda-filter-by-top-headline |
| ~fr~        | refine by tag       | org-agenda-filter-by-tag-refine   |
| ~ft~        | by tag              | org-agenda-filter-by-tag          |
| ~fx~        | by regexp           | org-agenda-filter-by-regexp       |
|-------------+---------------------+-----------------------------------|
| Date        |                     |                                   |
|-------------+---------------------+-----------------------------------|
| ~+~         | do later            | org-agenda-do-date-later          |
| ~-~         | do earlier          | org-agenda-do-date-earlier        |
| ~dd~        | set deadline        | org-agenda-deadline               |
| ~dD~        | remove deadline     | org-agenda-deadline               |
| ~ds~        | schedule            | org-agenda-schedule               |
| ~dS~        | un-schedule         | org-agenda-schedule               |
| ~dt~        | timestamp           | org-agenda-date-prompt            |
|-------------+---------------------+-----------------------------------|
| Toggle      |                     |                                   |
|-------------+---------------------+-----------------------------------|
| ~ta~        | archive             | org-agenda-archives-mode          |
| ~tc~        | clocking issues     | org-agenda-show-clocking-issues   |
| ~td~        | diaries             | org-agenda-toggle-diary           |
| ~tf~        | follow              | org-agenda-follow-mode            |
| ~tl~        | log                 | org-agenda-log-mode               |
| ~tr~        | clock report        | org-agenda-clockreport-mode       |
|-------------+---------------------+-----------------------------------|
| View        |                     |                                   |
|-------------+---------------------+-----------------------------------|
| ~vd~        | day                 | org-agenda-day-view               |
| ~vm~        | month               | org-agenda-month-view             |
| ~vn~        | next span           | org-agenda-later                  |
| ~vp~        | prev span           | org-agenda-earlier                |
| ~vr~        | reset               | org-agenda-reset-view             |
| ~vt~        | fortnight           | org-agenda-fortnight-view         |
| ~vw~        | week                | org-agenda-week-view              |
| ~vy~        | year                | org-agenda-year-view              |
|-------------+---------------------+-----------------------------------|
| Clock       |                     |                                   |
|-------------+---------------------+-----------------------------------|
| ~cI~        | in                  | org-agenda-clock-in               |
| ~cj~        | jump                | org-agenda-clock-goto             |
| ~cO~        | out                 | org-agenda-clock-out              |
| ~cq~        | cancel              | org-agenda-clock-cancel           |
|-------------+---------------------+-----------------------------------|
| Other       |                     |                                   |
|-------------+---------------------+-----------------------------------|
| ~.~         | go to today         | org-agenda-goto-today             |
| ~gd~        | go to date          | org-agenda-goto-date              |
| ~gr~        | reload              | org-agenda-redo                   |

** Pomodoro

| Key binding | Description       |
|-------------+-------------------|
| ~SPC m C p~ | starts a pomodoro |

** Presentation
org-present must be activated explicitly by typing: ~SPC SPC org-present~

| Key binding | Description    |
|-------------+----------------|
| ~h~         | previous slide |
| ~l~         | next slide     |
| ~q~         | quit           |

** Helm-org-rifle

| Key binding | Description                                |
|-------------+--------------------------------------------|
| ~SPC a o r~ | Search org files for keywords and headings |

** Org-projectile

| Key binding       | Description                                             |
|-------------------+---------------------------------------------------------|
| ~SPC a o p~       | Capture a TODO for the current project                  |
| ~SPC u SPC a o p~ | Capture a TODO for any given project (choose from list) |
| ~SPC p o~         | Go to the TODOs for the current project                 |

** Org-journal

| Key binding         | Description                                     |
|---------------------+-------------------------------------------------|
| ~SPC a o j j~       | New journal entry                               |
| ~SPC u SPC a o j j~ | Open today's journal without adding a new entry |
| ~SPC a o j s~       | Search journal entries                          |

Journal entries are highlighted in the calendar. The following key bindings are
available for =calendar-mode= for navigating and manipulating the journal.

| Key binding | Description                           |
|-------------+---------------------------------------|
| ~SPC m i~   | Insert journal entry for date         |
| ~SPC m m~   | Search calendar month journal entries |
| ~SPC m n~   | Next journal entry                    |
| ~SPC m p~   | Previous journal entry                |
| ~SPC m r~   | Read journal entry                    |
| ~SPC m s~   | Search all journal entries            |
| ~SPC m w~   | Search calendar week journal entries  |
| ~SPC m y~   | Search calendar year journal entries  |

While viewing a journal entry in =org-journal-mode= the following key bindings
are available.

| Key binding | Description            |
|-------------+------------------------|
| ~SPC m j~   | New journal entry      |
| ~SPC m n~   | Next journal entry     |
| ~SPC m p~   | Previous journal entry |

** Org-brain
*** Application bindings

| Key binding   | Description                  |
|---------------+------------------------------|
| ~SPC a o B v~ | Visualize an org-brain entry |
| ~SPC a o B a~ | Go to the org-brain agenda   |

*** org-mode bindings

| Key binding   | Description                  |
|---------------+------------------------------|
| ~SPC m B a c~ | Add child                    |
| ~SPC m B a h~ | Add headline child           |
| ~SPC m B a f~ | Add friend                   |
| ~SPC m B a p~ | Add parent                   |
| ~SPC m B a r~ | Add resource                 |
| ~SPC m B g g~ | Go to an org-brain entry     |
| ~SPC m B g c~ | Go to child                  |
| ~SPC m B g f~ | Go to friend                 |
| ~SPC m B g p~ | Go to parent                 |
| ~SPC m B R~   | Refile entry                 |
| ~SPC m B x~   | Delete entry                 |
| ~SPC m B v~   | Visualize an org-brain entry |

*** Visualization bindings

| Key binding | Description                           |
|-------------+---------------------------------------|
| ~j / TAB~   | Goto next link                        |
| ~k / S-TAB~ | Goto previous link                    |
| ~C-y~       | Paste resource link                   |
| ~a~         | Add resource [[http://orgmode.org/manual/Attachments.html][attachment]]               |
| ~c~         | Add child                             |
| ~f~         | Find/visit another entry to visualize |
| ~l~         | Add resource link                     |
| ~p~         | Add parent                            |
| ~o~         | Open and edit the visualized entry    |
| ~r~         | Rename this, or another, entry        |

** Org-jira

| Key binding     | Description                                      |
|-----------------+--------------------------------------------------|
| ~SPC a o J p g~ | Get projects list                                |
| ~SPC a o J i b~ | Open the current issue in a WWW browser          |
| ~SPC a o J i g~ | Get issues                                       |
| ~SPC a o J i h~ | Get only head of issues                          |
| ~SPC a o J i f~ | Get only head of issues from filter              |
| ~SPC a o J i u~ | Update an issue at point                         |
| ~SPC a o J i w~ | Progress an issue at point                       |
| ~SPC a o J i r~ | Refresh an issue at point                        |
| ~SPC a o J i c~ | Create an issue at point                         |
| ~SPC a o J i y~ | Copy current issue key                           |
| ~SPC a o J s c~ | Create a subtask                                 |
| ~SPC a o J s g~ | Get subtasks                                     |
| ~SPC a o J c u~ | Update the comment at point or add a new comment |
| ~SPC a o J t j~ | Convert the TODO item at point to a Jira ticket  |