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Ben Woodcroft ec2a67de88
gnu: Add python-dendropy. 
* gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy): New
variables.
* gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-07-09 08:00:34 +10:00
..
bootstrap
patches gnu: Add python-dendropy. 2016-07-09 08:00:34 +10:00
abduco.scm
abiword.scm
acct.scm
acl.scm
admin.scm gnu: Add di. 2016-07-07 20:38:49 -04:00
adns.scm
aidc.scm
algebra.scm gnu: pari-gp: Update to 2.7.6. 2016-06-24 13:56:07 +02:00
animation.scm
anthy.scm
apl.scm
apr.scm
aspell.scm
assembly.scm gnu: lightning: Fix typo. 2016-06-22 11:43:41 +03:00
attr.scm
audacity.scm
audio.scm gnu: alsa-modular-synth: Build with modular qt. 2016-06-16 18:06:42 +03:00
augeas.scm
autogen.scm
autotools.scm
avahi.scm
avr.scm
backup.scm
base.scm
bash.scm
bdw-gc.scm
bioinformatics.scm gnu: Add python-dendropy. 2016-07-09 08:00:34 +10:00
bison.scm
bittorrent.scm gnu: aria2: Update to 1.24.0. 2016-06-17 15:41:45 +03:00
boost.scm
bootstrap.scm
busybox.scm gnu: busybox: Use 'modify-phases'. 2016-06-30 19:11:45 +03:00
c.scm
calcurse.scm
calendar.scm
ccache.scm
cdrom.scm gnu: xorriso: Update to 1.4.4. 2016-07-03 00:39:21 +03:00
certs.scm
check.scm
ci.scm
cmake.scm
code.scm
commencement.scm
compression.scm gnu: Add lbzip2. 2016-06-18 19:49:08 +02:00
conkeror.scm gnu: conkeror: Update to 1.0.3 2016-07-03 20:30:08 +03:00
conky.scm
connman.scm
cook.scm
cpio.scm
cppi.scm
cross-base.scm
crypto.scm gnu: Add opendht. 2016-06-25 11:28:53 -04:00
cryptsetup.scm
cups.scm
curl.scm
cyrus-sasl.scm
databases.scm Update name for ng0. 2016-07-03 23:48:32 +02:00
datamash.scm
datastructures.scm
dav.scm gnu: vdirsyncer: Update to 0.11.2. 2016-06-20 18:51:44 -04:00
dc.scm
debug.scm gnu: Update american-fuzzy-lop to 2.15b. 2016-06-21 00:02:02 -05:00
dejagnu.scm
dico.scm
dictionaries.scm gnu: Add GNU Diction. 2016-06-24 09:01:22 +02:00
dillo.scm
disk.scm
djvu.scm
dns.scm
docbook.scm
docker.scm
documentation.scm gnu: Add scrollkeeper. 2016-07-04 21:32:31 +02:00
dunst.scm
dvtm.scm
ebook.scm gnu: calibre: Build with qtbase. 2016-06-16 18:06:42 +03:00
ed.scm
elf.scm
emacs.scm gnu: Add emacs-hl-todo. 2016-07-06 19:02:13 +02:00
enchant.scm
engineering.scm gnu: librecad: Update to 2.1.1. 2016-07-03 09:56:45 +03:00
enlightenment.scm gnu: enlightenment: Update to 0.21.0. 2016-07-02 22:15:32 +03:00
entr.scm
erlang.scm gnu: Add erlang. 2016-06-24 10:45:26 -04:00
fcitx.scm
feh.scm
figlet.scm
file.scm
finance.scm gnu: bitcoin-core: Update to 0.12.1. 2016-06-16 18:06:42 +03:00
firmware.scm
fish.scm
flashing-tools.scm gnu: avrdude: Use libusb-compat. 2016-06-29 07:15:33 +02:00
flex.scm
fltk.scm
fonts.scm Update name for ng0. 2016-07-03 23:48:32 +02:00
fontutils.scm
freedesktop.scm
freeipmi.scm
fribidi.scm
ftp.scm
fvwm.scm
game-development.scm gnu: Add quesoglc. 2016-06-20 09:03:30 -04:00
games.scm gnu: Add chromium-bsu. 2016-07-04 11:36:38 -04:00
gawk.scm
gcal.scm
gcc.scm
gd.scm
gdb.scm
geeqie.scm gnu: exiv2: Update to 0.25. 2016-07-03 12:55:02 +03:00
geo.scm gnu: Add gnome-maps. 2016-06-15 13:18:32 -04:00
gettext.scm
ghostscript.scm
gimp.scm gnu: gimp: Fix CVE-2016-4994. 2016-07-02 10:13:55 -04:00
gkrellm.scm
gl.scm
glib.scm gnu: telepathy-glib: Enable vala bindings. 2016-06-15 13:18:30 -04:00
gnome.scm gnu: shotwell: Update to 0.23.1. 2016-06-20 23:43:37 -05:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm gnurl: Update to 7.48.0. 2016-07-04 10:01:12 +03:00
gnupg.scm gnu: gnupg: Update to 2.1.13. 2016-06-16 19:51:08 -04:00
gnustep.scm
gnuzilla.scm gnu: Adjust to yasm change of module. 2016-06-21 12:27:50 +02:00
golang.scm gnu: Add Go 1.4. 2016-06-27 14:09:10 +02:00
gperf.scm
gprolog.scm
gps.scm gnu: gpsbabel: Build with modular qt. 2016-06-16 18:06:42 +03:00
graphics.scm gnu: openimageio: Update to 1.6.15. 2016-07-03 06:44:49 +03:00
graphviz.scm
groff.scm
grub.scm
gsasl.scm
gstreamer.scm gnu: Adjust to yasm change of module. 2016-06-21 12:27:50 +02:00
gtk.scm
guile-wm.scm
guile.scm gnu: Add mcron2. 2016-06-22 22:56:06 +02:00
gv.scm
gxmessage.scm
haskell.scm gnu: haskell.scm: Replace http with https in Hackage, Github. 2016-06-22 21:59:44 +03:00
hugs.scm
hurd.scm
ibus.scm
icu4c.scm
idutils.scm
image.scm
imagemagick.scm gnu: imagemagick: Update to 6.9.5-0. 2016-07-01 20:27:09 -04:00
indent.scm
inklingreader.scm
inkscape.scm
irc.scm gnu: quassel: Build with modular qt. 2016-07-07 12:23:39 +03:00
iso-codes.scm
java.scm gnu: java-swt: Update to 4.6. 2016-06-24 16:21:54 +02:00
jemalloc.scm
jrnl.scm
julia.scm gnu: julia: Use unbundled release tarball. 2016-06-14 16:27:19 +02:00
kde-frameworks.scm gnu: oxygen-icons: Build with qtbase. 2016-06-15 20:23:58 +03:00
kde.scm gnu: snorenotify: Build with modular qt. 2016-07-07 12:23:39 +03:00
key-mon.scm
kodi.scm gnu: Adjust to yasm change of module. 2016-06-21 12:27:50 +02:00
language.scm
ld-wrapper.in
ldc.scm
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm gnu: libreoffice: Update to 5.1.4.2 [fixes CVE-2016-4324]. 2016-07-01 15:53:08 +03:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libupnp.scm
libusb.scm gnu: python-pyusb: Update to 1.0.0. 2016-07-07 19:59:25 +03:00
links.scm
linux-libre-4.1-i686.conf
linux-libre-4.1-x86_64.conf
linux-libre-4.4-i686.conf
linux-libre-4.4-x86_64.conf
linux-libre-4.6-i686.conf
linux-libre-4.6-x86_64.conf
linux.scm gnu: Add rng-tools. 2016-07-03 17:29:12 -04:00
lirc.scm
lisp.scm Update name for ng0. 2016-07-03 23:48:32 +02:00
llvm.scm
logging.scm gnu: Add glog. 2016-06-29 11:13:03 +02:00
lout.scm
lsh.scm gnu: Avoid #:prefix when importing (gnu packages …). 2016-06-16 13:08:57 +02:00
lsof.scm
lua.scm
lxde.scm gnu: menu-cache: Update to 1.0.1. 2016-07-05 22:36:13 +03:00
lxqt.scm gnu: libqtxdg: Move qtbase to propagated-inputs. 2016-06-17 09:14:12 +03:00
lynx.scm
m4.scm
machine-learning.scm
mail.scm gnu: getmail: Update to 4.49.0. 2016-07-07 20:02:11 +03:00
make-bootstrap.scm
man.scm
markdown.scm
marst.scm
mate.scm
maths.scm gnu: openspecfun: Update to 0.5.2. 2016-07-03 10:14:16 +03:00
mc.scm
mcrypt.scm
messaging.scm
mg.scm
mit-krb5.scm
moe.scm
moreutils.scm
mp3.scm
mpd.scm
mpi.scm
mtools.scm
multiprecision.scm
music.scm gnu: Add Amsynth. 2016-07-03 19:02:49 +02:00
nano.scm
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm
ninja.scm gnu: ninja: Update to 1.7.1. 2016-07-03 12:00:25 +03:00
node.scm gnu: node: Make sure 'npm' remains a symlink after 'patch-shebangs'. 2016-06-29 10:06:18 +02:00
noweb.scm
ntp.scm gnu: openntpd: Update to 6.0p1. 2016-06-16 18:06:42 +03:00
nutrition.scm
nvi.scm
ocaml.scm
ocr.scm
onc-rpc.scm
openbox.scm
openldap.scm
openstack.scm gnu: python-oslosphinx: Update to 4.3.0. 2016-07-07 06:54:06 +03:00
orpheus.scm
ots.scm
owncloud.scm gnu: owncloud-client: Remove some bundled libs. 2016-06-30 10:56:57 +03:00
package-management.scm gnu: guix: Add emacs-magit-popup to propagated-inputs. 2016-07-04 10:14:18 +03:00
parallel.scm
password-utils.scm gnu: Add argon2. 2016-06-20 13:07:11 -04:00
patchutils.scm
pciutils.scm
pcre.scm
pdf.scm gnu: Add libharu. 2016-07-05 12:26:38 +02:00
pem.scm
perl.scm gnu: Add perltidy. 2016-07-05 16:12:23 +02:00
photo.scm gnu: perl-image-exiftool: Update to 10.20. 2016-06-14 15:01:35 +03:00
pkg-config.scm
plotutils.scm
polkit.scm
popt.scm gnu: Add gengetopt. 2016-06-15 15:34:58 +02:00
pretty-print.scm
protobuf.scm
pth.scm
pulseaudio.scm
pumpio.scm gnu: pumpa: Remove extra input. 2016-07-06 21:22:36 +03:00
pv.scm
python.scm gnu: python-websocket-client: Update to 0.37.0. 2016-07-07 19:44:11 +03:00
qemu.scm
qt.scm gnu: Add qtscript. 2016-07-07 12:23:39 +03:00
ragel.scm
rails.scm
ratpoison.scm
rc.scm
rdesktop.scm
rdf.scm
readline.scm
rrdtool.scm
rsync.scm
ruby.scm gnu: Add ruby-puma. 2016-06-21 21:46:45 +10:00
rush.scm
samba.scm
sawfish.scm
scanner.scm
scheme.scm gnu: chicken: Update to 4.11.0 [fixes CVE-2014-9651]. 2016-06-20 18:28:44 +03:00
screen.scm gnu: screen: Update to 4.4.0. 2016-06-20 12:56:03 +03:00
scribus.scm gnu: scribus: Build with modular qt. 2016-06-16 18:06:42 +03:00
sdl.scm
search.scm
serialization.scm gnu: Add msgpack. 2016-06-25 11:28:53 -04:00
serveez.scm
shellutils.scm
shishi.scm
skarnet.scm
skribilo.scm
slang.scm
slim.scm
smalltalk.scm gnu: smalltalk: Don't use bundled libraries. 2016-07-03 14:56:37 +03:00
speech.scm
ssh.scm
stalonetray.scm
statistics.scm gnu: Add r-domc. 2016-07-07 10:46:39 +02:00
suckless.scm
swig.scm
sxiv.scm
synergy.scm
task-management.scm
tbb.scm
tcl.scm
tcsh.scm
telephony.scm
terminals.scm
tex.scm gnu: texlive: Update to 2016. 2016-06-21 13:49:20 +03:00
texinfo.scm
textutils.scm
time.scm
tls.scm Update name for ng0. 2016-07-03 23:48:32 +02:00
tmux.scm
tor.scm
tre.scm
tv.scm
unrtf.scm
upnp.scm
uucp.scm
valgrind.scm
version-control.scm gnu: cgit: Update to 1.0. 2016-07-03 14:15:08 +03:00
video.scm gnu: ffmpeg-2.8: Update to 2.8.7. 2016-07-03 00:40:24 +03:00
vim.scm
vpn.scm
vtk.scm
w3m.scm
wdiff.scm
web.scm gnu: httpd: Update to 2.4.23. 2016-07-06 14:37:46 -04:00
webkit.scm
wget.scm
wicd.scm
wine.scm
wm.scm gnu: Add awesome. 2016-06-16 14:29:43 +02:00
wordnet.scm
wv.scm
wxwidgets.scm
xdisorg.scm gnu: rxvt-unicode: Update to 9.22. 2016-07-07 20:46:29 -04:00
xfce.scm gnu: Add orage. 2016-06-27 12:58:06 -04:00
xfig.scm
xiph.scm
xml.scm gnu: pugixml: Update to 1.7. 2016-07-03 08:28:51 +03:00
xnee.scm
xorg.scm gnu: xorg.scm: Replace http with https in URLs. 2016-06-22 21:59:55 +03:00
yubico.scm
zile.scm
zip.scm
zsh.scm