56e373ef75
* gnu/packages/bioinformatics.scm (preseq): New variable. * gnu/packages/patches/preseq-1.0.2-install-to-PREFIX.patch: New file. * gnu/packages/patches/preseq-1.0.2-link-with-libbam.patch: New file. * gnu-system.am (dist_patch_DATA): Add them.
38 lines
914 B
Diff
38 lines
914 B
Diff
This patch has been submitted upstream: https://github.com/smithlabcode/preseq/pull/15
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From 65387b0d766e6c06a15cf8d8f9183d9a4ba644bb Mon Sep 17 00:00:00 2001
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From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
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Date: Thu, 25 Jun 2015 15:01:53 +0200
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Subject: [PATCH] Install to PREFIX
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---
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Makefile | 8 ++++++--
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1 file changed, 6 insertions(+), 2 deletions(-)
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diff --git a/Makefile b/Makefile
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index 4d0367a..e334f2f 100644
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--- a/preseq-master/Makefile
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+++ b/preseq-master/Makefile
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@@ -22,6 +22,10 @@ ifndef ROOT
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ROOT = $(shell pwd)
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endif
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+ifndef PREFIX
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+PREFIX = $(ROOT)
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+endif
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+
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ifndef SMITHLAB_CPP
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SMITHLAB_CPP=$(ROOT)/smithlab_cpp/
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endif
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@@ -91,8 +95,8 @@ endif
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$(CXX) $(CXXFLAGS) -o $@ $^ $(INCLUDEARGS) $(LIBS)
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install: $(PROGS)
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- @mkdir -p $(ROOT)/bin
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- @install -m 755 $(PROGS) $(ROOT)/bin
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+ @mkdir -p $(PREFIX)/bin
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+ @install -m 755 $(PROGS) $(PREFIX)/bin
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clean:
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@-rm -f $(PROGS) *.o *~
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