530 lines
20 KiB
Scheme
530 lines
20 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
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;;; Copyright © 2013, 2014, 2015 Andreas Enge <andreas@enge.fr>
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;;; Copyright © 2015, 2016, 2018 Ricardo Wurmus <rekado@elephly.net>
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;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
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;;; Copyright © 2019 Julien Lepiller <julien@lepiller.eu>
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;;; Copyright © 2020 Alexandros Theodotou <alex@zrythm.org>
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;;; Copyright © 2020 Pjotr Prins <pjotr.guix@thebird.nl>
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;;; Copyright © 2020 Efraim Flashner <efraim@flashner.co.il>
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;;; Copyright © 2020 pukkamustard <pukkamustard@posteo.net>
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;;; Copyright © 2022 Marius Bakke <marius@gnu.org>
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;;; Copyright © 2022 Maxim Cournoyer <maxim.cournoyer@gmail.com>
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;;;
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;;; This file is part of GNU Guix.
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;;;
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;;; GNU Guix is free software; you can redistribute it and/or modify it
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;;; under the terms of the GNU General Public License as published by
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;;; the Free Software Foundation; either version 3 of the License, or (at
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;;; your option) any later version.
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;;;
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;;; GNU Guix is distributed in the hope that it will be useful, but
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;;; WITHOUT ANY WARRANTY; without even the implied warranty of
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;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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;;; GNU General Public License for more details.
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;;;
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;;; You should have received a copy of the GNU General Public License
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;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
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(define-module (gnu packages rdf)
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#:use-module (guix gexp)
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#:use-module ((guix licenses) #:prefix license:)
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#:use-module (guix packages)
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#:use-module (guix git-download)
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#:use-module (guix download)
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#:use-module (guix build-system cmake)
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#:use-module (guix build-system gnu)
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#:use-module (guix build-system python)
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#:use-module (guix build-system waf)
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#:use-module (gnu packages)
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#:use-module (gnu packages autotools)
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#:use-module (gnu packages boost)
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#:use-module (gnu packages check)
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#:use-module (gnu packages compression)
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#:use-module (gnu packages curl)
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#:use-module (gnu packages cyrus-sasl)
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#:use-module (gnu packages documentation)
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#:use-module (gnu packages dbm)
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#:use-module (gnu packages gnupg)
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#:use-module (gnu packages linux)
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#:use-module (gnu packages multiprecision)
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#:use-module (gnu packages pcre)
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#:use-module (gnu packages perl)
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#:use-module (gnu packages pkg-config)
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#:use-module (gnu packages python)
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#:use-module (gnu packages python-build)
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#:use-module (gnu packages python-web)
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#:use-module (gnu packages python-xyz)
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#:use-module (gnu packages qt)
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#:use-module (gnu packages time)
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#:use-module (gnu packages tls)
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#:use-module (gnu packages xml))
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(define-public raptor2
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(package
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(name "raptor2")
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(version "2.0.15")
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(source (origin
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(method url-fetch)
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(uri (string-append "https://download.librdf.org/source/" name
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"-" version ".tar.gz"))
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(patches
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(search-patches "raptor2-heap-overflow.patch"))
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(sha256
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(base32
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"1vc02im4mpc28zxzgli68k6j0dakh0k3s389bm436yvqajxg19xd"))))
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(build-system gnu-build-system)
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(inputs
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(list curl libxml2 libxslt zlib))
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(arguments
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`(#:parallel-tests? #f))
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(home-page "https://librdf.org/raptor/")
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(synopsis "RDF syntax library")
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(description "Raptor is a C library providing a set of parsers and
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serialisers that generate Resource Description Framework (RDF) triples
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by parsing syntaxes or serialise the triples into a syntax. The supported
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parsing syntaxes are RDF/XML, N-Quads, N-Triples 1.0 and 1.1, TRiG,
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Turtle 2008 and 2013, RDFa 1.0 and 1.1, RSS tag soup including all versions
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of RSS, Atom 1.0 and 0.3, GRDDL and microformats for HTML, XHTML and
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XML. The serialising syntaxes are RDF/XML (regular, abbreviated, XMP),
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Turtle 2013, N-Quads, N-Triples 1.1, Atom 1.0, RSS 1.0, GraphViz DOT,
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HTML and JSON.")
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(license license:lgpl2.1+))) ; or any choice of gpl2+ or asl2.0
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(define-public clucene
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(package
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(name "clucene")
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(version "2.3.3.4")
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(source (origin
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(method url-fetch)
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(uri (string-append "mirror://sourceforge/clucene/"
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"clucene-core-unstable/2.3/clucene-core-"
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version ".tar.gz"))
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(sha256
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(base32
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"1arffdwivig88kkx685pldr784njm0249k0rb1f1plwavlrw9zfx"))
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(patches (search-patches "clucene-pkgconfig.patch"
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"clucene-contribs-lib.patch"))))
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(build-system cmake-build-system)
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(inputs
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(list boost ; could also use bundled copy
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zlib))
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(arguments
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`(#:test-target "cl_test"
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#:configure-flags '("-DBUILD_CONTRIBS_LIB=ON")
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#:tests? #f)) ; Tests do not compile, as TestIndexSearcher.cpp uses
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; undeclared usleep. After fixing this, one needs to run
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; "make test" in addition to "make cl_test", then
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; SimpleTest fails.
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; Notice that the library appears to be unmaintained
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; with no reaction to bug reports.
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(home-page "http://clucene.sourceforge.net/")
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(synopsis "C text indexing and searching library")
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(description "CLucene is a high-performance, scalable, cross platform,
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full-featured indexing and searching API. It is a port of the very popular
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Java Lucene text search engine API to C++.")
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(license license:lgpl2.1)))
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(define-public lucene++
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(package
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(name "lucene++")
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(version "3.0.8")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/luceneplusplus/LucenePlusPlus")
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(commit (string-append "rel_" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"12v7r62f7pqh5h210pb74sfx6h70lj4pgfpva8ya2d55fn0qxrr2"))
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(modules '((guix build utils)))
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(snippet
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#~(begin
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(substitute* (list "src/config/core/CMakeLists.txt"
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"src/config/contrib/CMakeLists.txt")
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(("include/pkgconfig")
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"lib/pkgconfig")
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(("include/cmake")
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"share/cmake/lucene++"))))))
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(build-system cmake-build-system)
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(arguments
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(list #:configure-flags
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#~(list (string-append "-DLIB_DESTINATION:PATH="
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#$output "/lib")
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"-DINSTALL_GTEST:BOOL=OFF")
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#:phases
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#~(modify-phases %standard-phases
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(replace 'check
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;; XXX Tests are built unconditionally during the 'build phase.
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;; There's no ‘test’ target. README.md suggests running this.
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(lambda* (#:key tests? #:allow-other-keys)
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(when tests?
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(invoke "src/test/lucene++-tester"
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"--test_dir=../source/src/test/testfiles")))))))
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(native-inputs
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(list pkg-config))
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(inputs
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(list boost zlib))
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(home-page "https://github.com/luceneplusplus/LucenePlusPlus")
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(synopsis "Text search engine")
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(description "Lucene++ is an up to date C++ port of the popular Java
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Lucene library, a high-performance, full-featured text search engine.")
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(license (list license:asl2.0 license:lgpl3+)))); either asl or lgpl.
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(define-public lrdf
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(package
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(name "lrdf")
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(version "0.6.1")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/swh/LRDF")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"00wzkfb8y0aqd519ypz067cq099dpc89w69zw8ln39vl6f9x2pd4"))))
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(build-system gnu-build-system)
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(arguments
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'(#:phases
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(modify-phases %standard-phases
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(add-after 'unpack 'remove-out-of-tree-references
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(lambda _
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;; remove_test depends on an out-of-tree RDF file
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(substitute* "examples/Makefile.am"
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(("instances_test remove_test") "instances_test")
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(("\\$\\(TESTS\\) remove_test") "$(TESTS)"))
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#t))
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;; The default bootstrap phase executes autogen.sh, which fails.
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(replace 'bootstrap
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(lambda _ (invoke "autoreconf" "-vif") #t)))))
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(inputs
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`(("raptor" ,raptor2)
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("cyrus-sasl" ,cyrus-sasl)
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("zlib" ,zlib)))
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(native-inputs
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(list autoconf automake libtool pkg-config))
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(home-page "https://github.com/swh/LRDF")
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(synopsis "Lightweight RDF library for accessing LADSPA plugin metadata")
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(description
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"LRDF is a library to make it easy to manipulate RDF files describing
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LADSPA plugins. It can also be used for general RDF manipulation. It can
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read RDF/XLM and N3 files and export N3 files, and it also has a light
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taxonomic inference capability.")
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(license license:gpl2)))
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(define-public rasqal
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(package
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(name "rasqal")
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(version "0.9.33")
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(source (origin
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(method url-fetch)
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(uri (string-append "http://download.librdf.org/source/" name
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"-" version ".tar.gz"))
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(sha256
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(base32
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"0z6rrwn4jsagvarg8d5zf0j352kjgi33py39jqd29gbhcnncj939"))))
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(build-system gnu-build-system)
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(native-inputs
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(list perl perl-xml-dom ; for the tests
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pkg-config))
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(inputs
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(list libgcrypt libxml2 mpfr pcre
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`(,util-linux "lib")))
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(propagated-inputs
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(list raptor2)) ; stipulated by rasqal.pc
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(arguments
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`(#:parallel-tests? #f
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; test failure reported upstream, see
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; http://bugs.librdf.org/mantis/view.php?id=571
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#:tests? #f))
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(home-page "http://librdf.org/rasqal/")
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(synopsis "RDF query library")
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(description "Rasqal is a C library that handles Resource Description
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Framework (RDF) query language syntaxes, query construction and execution
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of queries returning results as bindings, boolean, RDF graphs/triples or
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syntaxes. The supported query languages are SPARQL Query 1.0,
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SPARQL Query 1.1, SPARQL Update 1.1 (no executing) and the Experimental
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SPARQL extensions (LAQRS). Rasqal can write binding query results in the
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SPARQL XML, SPARQL JSON, CSV, TSV, HTML, ASCII tables, RDF/XML and
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Turtle/N3 and read them in SPARQL XML, RDF/XML and Turtle/N3.")
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(license license:lgpl2.1+))) ; or any choice of gpl2+ or asl2.0
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(define-public redland
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(package
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(name "redland")
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(version "1.0.17")
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(source (origin
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(method url-fetch)
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(uri (string-append "http://download.librdf.org/source/" name
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"-" version ".tar.gz"))
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(sha256
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(base32
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"109n0kp39p966dpiasad2bb7q66rwbcb9avjvimw28chnpvlf66y"))))
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(build-system gnu-build-system)
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(native-inputs
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(list perl ; needed for installation
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pkg-config))
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(propagated-inputs
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(list rasqal)) ; in Requires.private field of .pc
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(inputs
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(list bdb))
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(home-page "http://librdf.org/")
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(synopsis "RDF library")
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(description "The Redland RDF Library (librdf) provides the RDF API
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and triple stores.")
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(license license:lgpl2.1+))) ; or any choice of gpl2+ or asl2.0
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(define-public serd
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(package
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(name "serd")
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(version "0.30.8")
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(source (origin
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(method url-fetch)
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(uri (string-append "https://download.drobilla.net/serd-"
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version ".tar.bz2"))
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(sha256
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(base32
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"11zs53yx40mv62vxsl15mvdh7s17y5v6lgcgahdvzxgnan7w8bk7"))))
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(build-system waf-build-system)
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(arguments
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`(#:tests? #f ; no check target
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#:phases
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(modify-phases %standard-phases
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(add-before
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'configure 'set-ldflags
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(lambda* (#:key outputs #:allow-other-keys)
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(setenv "LDFLAGS"
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(string-append "-Wl,-rpath="
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(assoc-ref outputs "out") "/lib"))
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#t)))))
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(home-page "https://drobilla.net/software/serd/")
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(synopsis "Library for RDF syntax supporting Turtle and NTriples")
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(description
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"Serd is a lightweight C library for RDF syntax which supports reading
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and writing Turtle and NTriples. Serd is not intended to be a swiss-army
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knife of RDF syntax, but rather is suited to resource limited or performance
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critical applications (e.g. converting many gigabytes of NTriples to Turtle),
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or situations where a simple reader/writer with minimal dependencies is
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ideal (e.g. in LV2 implementations or embedded applications).")
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(license license:isc)))
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(define-public sord
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(package
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(name "sord")
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(version "0.16.8")
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(source (origin
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(method url-fetch)
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(uri (string-append "https://download.drobilla.net/sord-"
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version ".tar.bz2"))
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(sha256
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(base32
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"052y7zllrg0bzyky2rmrrwnnf16p6bk7q40rq9mgm0mzm8p9sa3w"))))
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(build-system waf-build-system)
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(arguments
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`(#:tests? #f ; no check target
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#:phases
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(modify-phases %standard-phases
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(add-before
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'configure 'set-ldflags
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(lambda* (#:key outputs #:allow-other-keys)
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(setenv "LDFLAGS"
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(string-append "-Wl,-rpath="
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(assoc-ref outputs "out") "/lib"))
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#t)))))
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(inputs
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(list pcre))
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(native-inputs
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(list pkg-config))
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(propagated-inputs
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(list serd)) ; required by sord-0.pc
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(home-page "https://drobilla.net/software/sord/")
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(synopsis "C library for storing RDF data in memory")
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(description
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"Sord is a lightweight C library for storing RDF data in memory.")
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(license license:isc)))
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(define-public python-rdflib
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(package
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(name "python-rdflib")
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(version "6.1.1")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "rdflib" version))
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||
(sha256
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||
(base32
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"0m7pyq771vl4zf9xd3pxjbg7x6ac97b3djfbv9qq9fch56ps1gwd"))))
|
||
(build-system python-build-system)
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||
(arguments
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||
'(#:phases
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||
(modify-phases %standard-phases
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||
(add-after 'unpack 'adjust-tests
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||
(lambda _
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||
(for-each delete-file
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||
'(;; This test needs a font that is not shipped.
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"test/test_so_69984830.py"
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||
;; These tests need internet access.
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"test/jsonld/test_onedotone.py"
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"test/test_sparql_service.py"
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"test/test_graph.py"))))
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(replace 'check
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(lambda* (#:key tests? #:allow-other-keys)
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(when tests?
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(invoke "pytest" "-vv" "test/")))))))
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||
(native-inputs
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||
(list python-pytest))
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||
(propagated-inputs
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||
(list python-html5lib python-isodate python-pyparsing))
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||
(home-page "https://github.com/RDFLib/rdflib")
|
||
(synopsis "Python RDF library")
|
||
(description
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||
"RDFLib is a Python library for working with RDF, a simple yet
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powerful language for representing information.")
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||
(license (license:non-copyleft "file://LICENSE"
|
||
"See LICENSE in the distribution."))))
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(define-public python-rdflib-5
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(package
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||
(inherit python-rdflib)
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(version "5.0.0")
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||
(source
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||
(origin
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||
(method url-fetch)
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||
(uri (pypi-uri "rdflib" version))
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||
(sha256
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||
(base32
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||
"0mdi7xh4zcr3ngqwlgqdqf0i5bxghwfddyxdng1zwpiqkpa9s53q"))))
|
||
;; XXX: Lazily disable tests because they require a lot of work
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||
;; and this package is only transitional.
|
||
(arguments '(#:tests? #f))))
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||
|
||
;; Note: This package is only needed for rdflib < 6.0; supersede when
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||
;; the above are removed.
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(define-public python-rdflib-jsonld
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||
(package
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||
(name "python-rdflib-jsonld")
|
||
(version "0.6.2")
|
||
(source
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||
(origin
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||
(method url-fetch)
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||
(uri (pypi-uri "rdflib-jsonld" version))
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||
(sha256
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||
(base32
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||
"0qrshlqzv5g5bign7kjja3xf7hyk7xgayr3yd0qlqda1kl0x6z0h"))))
|
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(build-system python-build-system)
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||
(native-inputs
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||
(list python-nose))
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||
(propagated-inputs
|
||
(list python-rdflib))
|
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(home-page "https://github.com/RDFLib/rdflib-jsonld")
|
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(synopsis "rdflib extension adding JSON-LD parser and serializer")
|
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(description "This package provides an rdflib extension adding JSON-LD
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parser and serializer.")
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(license license:bsd-3)))
|
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|
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(define-public python-cfgraph
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||
(package
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||
(name "python-cfgraph")
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||
(version "0.2.1")
|
||
(source
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||
(origin
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||
(method url-fetch)
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||
(uri (pypi-uri "CFGraph" version))
|
||
(sha256
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||
(base32
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||
"0x7yz0lvqb6mkhl5fbml27sppmscgpf8v2ism9jzzf0h982ffzxm"))))
|
||
(build-system python-build-system)
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||
(propagated-inputs
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||
(list python-rdflib))
|
||
(home-page "https://github.com/hsolbrig/CFGraph")
|
||
(synopsis "RDF Collections flattener for rdflib")
|
||
(description
|
||
"This package contains RDF Collections flattener for @code{rdflib}.")
|
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(license license:asl2.0)))
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|
||
(define-public hdt-cpp
|
||
(package
|
||
(name "hdt-cpp")
|
||
(version "1.3.3")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/rdfhdt/hdt-cpp")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"1vsq80jnix6cy78ayag7v8ajyw7h8dqyad1q6xkf2hzz3skvr34z"))))
|
||
(build-system gnu-build-system)
|
||
(inputs
|
||
(list serd zlib))
|
||
(native-inputs
|
||
(list autoconf automake libtool pkg-config))
|
||
(home-page "https://github.com/rdfhdt/hdt-cpp")
|
||
(synopsis "C++ implementation of the HDT compression format")
|
||
(description "Header Dictionary Triples (HDT) is a compression format for
|
||
RDF data that can also be queried for Triple Patterns. This package provides a
|
||
C++ library as well as various command-line tools to to work with HDT.")
|
||
(license license:lgpl2.1+)))
|
||
|
||
(define-public python-pyrdfa3
|
||
(package
|
||
(name "python-pyrdfa3")
|
||
(version "3.5.3")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "pyRdfa3" version))
|
||
(sha256
|
||
(base32 "1biif5lav3gswkhjzq882s4rgxzmvwsy5gb9dxdk9pw75fln6xhm"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
(list
|
||
#:tests? #f ;no test suite
|
||
#:phases
|
||
#~(modify-phases %standard-phases
|
||
(add-after 'unpack 'fix-python-3-issues
|
||
(lambda _
|
||
;; Delete files that appear to be versions for older Pythons;
|
||
;; they fail to byte compile (see:
|
||
;; https://github.com/RDFLib/pyrdfa3/issues/41).
|
||
(with-directory-excursion "pyRdfaExtras/serializers"
|
||
(for-each delete-file
|
||
(list "prettyXMLserializer_3.py"
|
||
"prettyXMLserializer_3_2.py")))
|
||
;; See https://github.com/RDFLib/pyrdfa3/issues/42.
|
||
(substitute* "pyRdfaExtras/__init__.py"
|
||
(("from StringIO import StringIO")
|
||
"from io import StringIO")))))))
|
||
(propagated-inputs (list python-html5lib python-rdflib))
|
||
(home-page "https://www.w3.org/2012/pyRdfa/")
|
||
(synopsis "RDFa Python distiller/parser library")
|
||
(description "This library can extract RDFa 1.1 from (X)HTML, SVG, or XML.
|
||
It can produce serialized versions of the extracted graph, or an RDFLib
|
||
Graph.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python-sparqlwrapper
|
||
(package
|
||
(name "python-sparqlwrapper")
|
||
(version "2.0.0")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/RDFLib/sparqlwrapper")
|
||
(commit version)))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"1b4vg754kcxvinwdv7pjfmwbnmgm50w8mb2naf2lwp27bpyllvkb"))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
'(#:tests? #f)) ; The test suite simply queries external HTTP endpoints.
|
||
(propagated-inputs (list python-rdflib))
|
||
(home-page "https://rdflib.dev/sparqlwrapper/")
|
||
(synopsis "SPARQL Endpoint interface to Python")
|
||
(description "Python wrapper around a SPARQL service. It helps in creating
|
||
the query URI and, possibly, convert the result into a more manageable
|
||
format.")
|
||
(license license:w3c)))
|