* gnu/packages/algebra.scm (eigen-for-tensorflow-lite): Remove variable. * gnu/packages/machine-learning.scm (tensorflow-lite): Update to 2.12.1 [arguments]<configure-flags>: Turn on GPU and RUY use; Use cmake to find packages already in Guix as dependencies for absl-cpp, eigen, flatbuffer, neon2ssl, cpuinfo, ruy. [arguments]<phases>: Remove operations setting up absl-cpp, eigen, ruy, and neon2ssl as native inouts as now we use Guix's packages of these as dependencies. Do default build phase. Add steps to install C shared library and benchmark_model tool. [inputs]: Add cpuinfo, eigen, fp16, mesa-header, opencl, pthreadpool, ruy, vulkan and xnnpack as explicit inputs. [native-inputs]: Remove local setup of neon2ssl and ruy as we now use Guix's packages of these as explicit dependencies. * gnu/packages/serialization.scm (flatbuffers-next-shared): New variable, flatbuffers-next built with -fPIC as needed by tensorflow-lite. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
844 lines
32 KiB
Scheme
844 lines
32 KiB
Scheme
;;; GNU Guix --- Functional package management for GNU
|
||
;;; Copyright © 2015, 2017, 2019, 2020, 2021 Ricardo Wurmus <rekado@elephly.net>
|
||
;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org>
|
||
;;; Copyright © 2016 David Craven <david@craven.ch>
|
||
;;; Copyright © 2016, 2019, 2020, 2022 Marius Bakke <marius@gnu.org>
|
||
;;; Copyright © 2016, 2018, 2019, 2021 Efraim Flashner <efraim@flashner.co.il>
|
||
;;; Copyright © 2017 Corentin Bocquillon <corentin@nybble.fr>
|
||
;;; Copyright © 2017 Gregor Giesen <giesen@zaehlwerk.net>
|
||
;;; Copyright © 2017 Frederick M. Muriithi <fredmanglis@gmail.com>
|
||
;;; Copyright © 2017 Nikita <nikita@n0.is>
|
||
;;; Copyright © 2017–2019, 2022 Tobias Geerinckx-Rice <me@tobias.gr>
|
||
;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
|
||
;;; Copyright © 2020 Martin Becze <mjbecze@riseup.net>
|
||
;;; Copyright © 2020 Alexandros Theodotou <alex@zrythm.org>
|
||
;;; Copyright © 2023 Alexey Abramov <levenson@mmer.org>
|
||
;;; Copyright © 2023 Sharlatan Hellseher <sharlatanus@gmail.com>
|
||
;;; Copyright © 2023 Vinicius Monego <monego@posteo.net>
|
||
;;;
|
||
;;; This file is part of GNU Guix.
|
||
;;;
|
||
;;; GNU Guix is free software; you can redistribute it and/or modify it
|
||
;;; under the terms of the GNU General Public License as published by
|
||
;;; the Free Software Foundation; either version 3 of the License, or (at
|
||
;;; your option) any later version.
|
||
;;;
|
||
;;; GNU Guix is distributed in the hope that it will be useful, but
|
||
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
|
||
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
||
;;; GNU General Public License for more details.
|
||
;;;
|
||
;;; You should have received a copy of the GNU General Public License
|
||
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
|
||
|
||
(define-module (gnu packages serialization)
|
||
#:use-module ((guix licenses) #:prefix license:)
|
||
#:use-module (guix packages)
|
||
#:use-module (guix gexp)
|
||
#:use-module (guix download)
|
||
#:use-module (guix hg-download)
|
||
#:use-module (guix git-download)
|
||
#:use-module (guix utils)
|
||
#:use-module (guix build-system cmake)
|
||
#:use-module (guix build-system copy)
|
||
#:use-module (guix build-system gnu)
|
||
#:use-module (guix build-system meson)
|
||
#:use-module (guix build-system pyproject)
|
||
#:use-module (guix build-system python)
|
||
#:use-module (gnu packages)
|
||
#:use-module (gnu packages autotools)
|
||
#:use-module (gnu packages base)
|
||
#:use-module (gnu packages bash)
|
||
#:use-module (gnu packages boost)
|
||
#:use-module (gnu packages check)
|
||
#:use-module (gnu packages compression)
|
||
#:use-module (gnu packages cmake)
|
||
#:use-module (gnu packages cpp)
|
||
#:use-module (gnu packages databases)
|
||
#:use-module (gnu packages documentation)
|
||
#:use-module (gnu packages gcc)
|
||
#:use-module (gnu packages llvm)
|
||
#:use-module (gnu packages lua)
|
||
#:use-module (gnu packages pkg-config)
|
||
#:use-module (gnu packages python)
|
||
#:use-module (gnu packages python-build)
|
||
#:use-module (gnu packages python-check)
|
||
#:use-module (gnu packages python-science)
|
||
#:use-module (gnu packages python-xyz)
|
||
#:use-module (gnu packages perl))
|
||
|
||
(define-public avro-cpp-1.9
|
||
(package
|
||
(name "avro-cpp")
|
||
(version "1.9.2")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append
|
||
"https://archive.apache.org/dist/avro/avro-" version
|
||
"/avro-src-" version ".tar.gz"))
|
||
(sha256
|
||
(base32 "0i3fpm7r72yw397qc8yw9ybzk2mxjkv0yk5hnn00ylc1wbd0np73"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(add-after 'unpack 'chdir
|
||
(lambda _ (chdir "lang/c++"))))))
|
||
(inputs
|
||
(list boost snappy))
|
||
(home-page "https://avro.apache.org/")
|
||
(synopsis "Data serialization system")
|
||
(description "Apache Avro is a data serialization system. Avro provides:
|
||
@enumerate
|
||
@item Rich data structures;
|
||
@item a compact, fast, binary data format;
|
||
@item a container file, to store persistent data;
|
||
@item remote procedure call (RPC); and
|
||
@item simple integration with dynamic languages.
|
||
@end enumerate
|
||
|
||
Code generation is not required to read or write data files nor to use or
|
||
implement RPC protocols.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public avro-cpp-1.9-for-irods
|
||
(package
|
||
(inherit avro-cpp-1.9)
|
||
(properties `((hidden? . #true)))
|
||
(arguments
|
||
`(#:configure-flags
|
||
'("-DCMAKE_CXX_COMPILER=clang++"
|
||
"-DCMAKE_CXX_FLAGS=-stdlib=libc++"
|
||
"-DCMAKE_EXE_LINKER_FLAGS=-lc++abi -lz")
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-after 'unpack 'chdir
|
||
(lambda _ (chdir "lang/c++")))
|
||
(add-after 'set-paths 'adjust-CPLUS_INCLUDE_PATH
|
||
(lambda* (#:key inputs #:allow-other-keys)
|
||
(let ((gcc (assoc-ref inputs "gcc")))
|
||
(setenv "CPLUS_INCLUDE_PATH"
|
||
(string-join
|
||
(cons* (search-input-directory inputs "include/c++/v1")
|
||
;; Hide GCC's C++ headers so that they do not interfere with
|
||
;; the Clang headers.
|
||
(delete (string-append gcc "/include/c++")
|
||
(string-split (getenv "CPLUS_INCLUDE_PATH")
|
||
#\:)))
|
||
":"))
|
||
(format #true
|
||
"environment variable `CPLUS_INCLUDE_PATH' changed to ~a~%"
|
||
(getenv "CPLUS_INCLUDE_PATH"))))))))
|
||
(inputs
|
||
`(("boost" ,boost-for-irods)
|
||
("clang" ,clang-toolchain-6)
|
||
("libcxx+libcxxabi" ,libcxx+libcxxabi-6)
|
||
("libcxxabi" ,libcxxabi-6)
|
||
("snappy" ,snappy-with-clang6)
|
||
("zlib" ,zlib)))))
|
||
|
||
(define-public cereal
|
||
(package
|
||
(name "cereal")
|
||
(version "1.3.2")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/USCiLab/cereal")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"02sd90ynya7wg013zwzjr79fsv4bzqgfg9l2mapd4j38rv06gahx"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
(list
|
||
#:configure-flags #~'("-DSKIP_PORTABILITY_TEST=ON"
|
||
;; Don't bother building the sandbox examples.
|
||
"-DSKIP_PERFORMANCE_COMPARISON=ON"
|
||
"-DBUILD_SANDBOX=OFF")
|
||
#:phases
|
||
#~(modify-phases %standard-phases
|
||
(add-after 'install 'install-doc
|
||
(lambda _
|
||
(let ((doc (string-append #$output "/share/doc/html")))
|
||
(invoke "make" "doc")
|
||
(mkdir-p doc)
|
||
(copy-recursively "doc/html" doc)))))))
|
||
(native-inputs
|
||
(list doxygen gcc-10))
|
||
(home-page "https://uscilab.github.io/cereal/")
|
||
(synopsis "C++11 library for serialization")
|
||
(description
|
||
"Cereal is a header-only C++11 serialization library. Cereal takes
|
||
arbitrary data types and reversibly turns them into different representations,
|
||
such as compact binary encodings, XML, or JSON.")
|
||
;; Note: Cereal bundles forked versions of rapidxml and rapidjson
|
||
;; (see include/cereal/external/), so list their licenses too.
|
||
(license (list license:bsd-3 ;Cereal itself
|
||
;; The bundled RapidXML is dual Boost/Expat (users choice).
|
||
;; RapidJSON is Expat licensed, and further bundles a
|
||
;; stdint.h with BSD-3.
|
||
license:boost1.0 license:expat
|
||
;; Finally, include/cereal/external/base64.hpp has a
|
||
;; home-grown BSD-like license.
|
||
(license:non-copyleft
|
||
"file://include/cereal/external/LICENSE")))))
|
||
|
||
;; Some packages fail with the latest version. Remove this variable
|
||
;; when unused.
|
||
(define-public cereal-1.3.0
|
||
(package
|
||
(inherit cereal)
|
||
(version "1.3.0")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/USCiLab/cereal")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name "cereal" version))
|
||
(sha256
|
||
(base32
|
||
"0hc8wh9dwpc1w1zf5lfss4vg5hmgpblqxbrpp1rggicpx9ar831p"))
|
||
(snippet
|
||
'(delete-file "unittests/doctest.h"))))
|
||
(arguments
|
||
(substitute-keyword-arguments (package-arguments cereal)
|
||
((#:configure-flags flags #~'())
|
||
#~'("-DSKIP_PORTABILITY_TEST=ON" "-DWITH_WERROR=OFF"))
|
||
((#:phases phases #~%standard-phases)
|
||
#~(modify-phases #$phases
|
||
(add-after 'unpack 'update-doctest
|
||
(lambda* (#:key inputs #:allow-other-keys)
|
||
(install-file (search-input-file inputs "unittests/doctest.h")
|
||
"unittests/")))
|
||
(add-before 'configure 'skip-sandbox
|
||
(lambda _
|
||
(substitute* "CMakeLists.txt"
|
||
(("add_subdirectory\\(sandbox\\)") ""))))))))
|
||
(native-inputs
|
||
(list doxygen gcc-10
|
||
(package-source cereal)))))
|
||
|
||
(define-public msgpack
|
||
(package
|
||
(name "msgpack")
|
||
(version "3.3.0")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri
|
||
(string-append
|
||
"https://github.com/msgpack/msgpack-c/releases/download/"
|
||
"cpp-" version "/msgpack-" version ".tar.gz"))
|
||
(snippet
|
||
'(let ((p (open-file "msgpack.pc.in" "a")))
|
||
(display
|
||
(string-append "Requires: " "zlib" "\n") p)
|
||
(close-output-port p)
|
||
#t))
|
||
(sha256
|
||
(base32 "0yzhq50ijvwrfkr97knhvn54lj3f4hr3zy39yq8wpf6xll94s4bf"))))
|
||
(build-system cmake-build-system)
|
||
(native-inputs
|
||
(list googletest-1.8 pkg-config))
|
||
(propagated-inputs
|
||
(list zlib)) ;; Msgpack installs two headers (zbuffer.h,
|
||
;; zbuffer.hpp) which #include <zlib.h>. However, 'guix gc --references'
|
||
;; does not detect a store reference to zlib since these headers are not
|
||
;; compiled.
|
||
(home-page "https://www.msgpack.org")
|
||
(synopsis "Binary serialization library")
|
||
(description "Msgpack is a library for C/C++ that implements binary
|
||
serialization.")
|
||
(license license:boost1.0)))
|
||
|
||
(define-public libmpack
|
||
(package
|
||
(name "libmpack")
|
||
(version "1.0.5")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/tarruda/libmpack")
|
||
(commit version)))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32 "0rai5djdkjz7bsn025k5489in7r1amagw1pib0z4qns6b52kiar2"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:test-target "test"
|
||
#:make-flags
|
||
(list "CC=gcc"
|
||
(string-append "PREFIX=" (assoc-ref %outputs "out")))
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(delete 'configure))))
|
||
(native-inputs
|
||
(list libtool))
|
||
(home-page "https://github.com/tarruda/libmpack")
|
||
(synopsis "Small binary serialization library")
|
||
(description "Libmpack is a small binary serialization and RPC library
|
||
that implements both the msgpack and msgpack-rpc specifications.")
|
||
(license license:expat)))
|
||
|
||
(define-public lua-libmpack
|
||
(package (inherit libmpack)
|
||
(name "lua-libmpack")
|
||
(version "1.0.8")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/libmpack/libmpack-lua")
|
||
(commit version)))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32 "1ijvzgq5hvib03w5rghv31wi7byamwg7qdx5pawvhvnflaii8ivw"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(;; FIXME: tests require "busted", which is not yet available in Guix.
|
||
#:tests? #f
|
||
#:test-target "test"
|
||
#:make-flags
|
||
(let* ((lua-version ,(package-version lua))
|
||
(lua-major+minor ,(version-major+minor (package-version lua))))
|
||
(list "CC=gcc"
|
||
"FETCH=echo" ; don't fetch anything from the web
|
||
"UNTGZ=echo" ; and don't try to unpack it
|
||
"USE_SYSTEM_LUA=yes"
|
||
(string-append "MPACK_LUA_VERSION=" lua-version)
|
||
(string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
|
||
(string-append "PREFIX="
|
||
(assoc-ref %outputs "out"))
|
||
(string-append "LUA_CMOD_INSTALLDIR="
|
||
(assoc-ref %outputs "out")
|
||
"/lib/lua/" lua-major+minor)))
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(delete 'configure)
|
||
(add-after 'unpack 'unpack-mpack-sources
|
||
(lambda* (#:key inputs #:allow-other-keys)
|
||
;; This is broken because mpack-src is not a file, but all
|
||
;; prerequisites are added to the inputs of the gcc invocation.
|
||
(substitute* "Makefile"
|
||
(("\\$\\(MPACK\\): mpack-src") "$(MPACK): "))
|
||
(copy-recursively (assoc-ref inputs "libmpack")
|
||
"mpack-src")
|
||
#t)))))
|
||
(inputs
|
||
(list lua))
|
||
(native-inputs
|
||
`(("pkg-config" ,pkg-config)
|
||
("libmpack" ,(package-source libmpack))))
|
||
(home-page "https://github.com/libmpack/libmpack-lua")
|
||
(synopsis "Lua bindings for the libmpack binary serialization library")))
|
||
|
||
(define-public lua5.1-libmpack
|
||
(package/inherit lua-libmpack
|
||
(name "lua5.1-libmpack")
|
||
(arguments
|
||
(substitute-keyword-arguments (package-arguments lua-libmpack)
|
||
((#:make-flags flags)
|
||
`(let* ((lua-version ,(package-version lua-5.1))
|
||
(lua-major+minor ,(version-major+minor (package-version lua-5.1))))
|
||
(list "CC=gcc"
|
||
"USE_SYSTEM_LUA=yes"
|
||
(string-append "MPACK_LUA_VERSION=" lua-version)
|
||
(string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
|
||
(string-append "PREFIX="
|
||
(assoc-ref %outputs "out"))
|
||
(string-append "LUA_CMOD_INSTALLDIR="
|
||
(assoc-ref %outputs "out")
|
||
"/lib/lua/" lua-major+minor))))))
|
||
(inputs
|
||
`(("lua" ,lua-5.1)))))
|
||
|
||
(define-public lua5.2-libmpack
|
||
(package/inherit lua-libmpack
|
||
(name "lua5.2-libmpack")
|
||
(arguments
|
||
(substitute-keyword-arguments (package-arguments lua-libmpack)
|
||
((#:make-flags flags)
|
||
`(let* ((lua-version ,(package-version lua-5.2))
|
||
(lua-major+minor ,(version-major+minor (package-version lua-5.2))))
|
||
(list "CC=gcc"
|
||
"USE_SYSTEM_LUA=yes"
|
||
(string-append "MPACK_LUA_VERSION=" lua-version)
|
||
(string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
|
||
(string-append "PREFIX="
|
||
(assoc-ref %outputs "out"))
|
||
(string-append "LUA_CMOD_INSTALLDIR="
|
||
(assoc-ref %outputs "out")
|
||
"/lib/lua/" lua-major+minor))))))
|
||
(inputs
|
||
`(("lua" ,lua-5.2)))))
|
||
|
||
(define-public libyaml
|
||
(package
|
||
(name "libyaml")
|
||
(version "0.2.5")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (string-append "https://pyyaml.org/download/libyaml/yaml-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"1x4fcw13r3lqy8ndydr3ili87wicplw2awbcv6r21qgyfndswhn6"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
'(#:configure-flags '("--disable-static")))
|
||
(home-page "https://pyyaml.org/wiki/LibYAML")
|
||
(synopsis "YAML 1.1 parser and emitter written in C")
|
||
(description
|
||
"LibYAML is a YAML 1.1 parser and emitter written in C.")
|
||
(license license:expat)))
|
||
|
||
(define-public libyaml+static
|
||
(package
|
||
(inherit libyaml)
|
||
(name "libyaml+static")
|
||
(arguments
|
||
'(#:configure-flags '("--enable-static")))))
|
||
|
||
(define-public libcyaml
|
||
(package
|
||
(name "libcyaml")
|
||
(version "1.3.1")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/tlsa/libcyaml")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
|
||
(patches (search-patches "libcyaml-libyaml-compat.patch"))
|
||
(sha256
|
||
(base32 "0gvf3h8r8300wdwfjgxw3nzlj7w14q63m67p8wdm5fvpha017n4y"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:test-target "test"
|
||
#:make-flags
|
||
(list (string-append "PREFIX=" (assoc-ref %outputs "out"))
|
||
(string-append "CC=" ,(cc-for-target)))
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(delete 'configure)))) ; no configure script
|
||
(inputs
|
||
(list libyaml))
|
||
(native-inputs
|
||
(list pkg-config))
|
||
(synopsis "C library for reading and writing YAML")
|
||
(description
|
||
"LibCYAML is a C library written in ISO C11 for reading and writing
|
||
structured YAML documents. The fundamental idea behind CYAML is to allow
|
||
applications to construct schemas which describe both the permissible
|
||
structure of the YAML documents to read/write, and the C data structure(s)
|
||
in which the loaded data is arranged in memory.")
|
||
(home-page "https://github.com/tlsa/libcyaml")
|
||
(license license:isc)))
|
||
|
||
(define-public libfyaml
|
||
(package
|
||
(name "libfyaml")
|
||
(version "0.8")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/pantoniou/libfyaml")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32 "002g0grddfi5y42lq06zj8266rf7h27wq76sr598ad5pxllx3y3g"))))
|
||
(build-system gnu-build-system)
|
||
(native-inputs
|
||
(list autoconf
|
||
automake
|
||
libtool
|
||
pkg-config))
|
||
(home-page "https://github.com/pantoniou/libfyaml")
|
||
(synopsis "YAML version 1.2 and JSON parser and writer")
|
||
(description "Libfyaml is a YAML parser and emitter, supporting the latest
|
||
YAML spec and passing the full YAML testsuite. It is designed to be very
|
||
efficient, avoiding copies of data, and has no artificial limits like the 1024
|
||
character limit for implicit keys.")
|
||
(license license:expat)))
|
||
|
||
(define-public yaml-cpp
|
||
(package
|
||
(name "yaml-cpp")
|
||
(version "0.6.3")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/jbeder/yaml-cpp")
|
||
(commit (string-append "yaml-cpp-" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32 "0ykkxzxcwwiv8l8r697gyqh1nl582krpvi7m7l6b40ijnk4pw30s"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
'(#:configure-flags '("-DYAML_BUILD_SHARED_LIBS=ON")))
|
||
(native-inputs
|
||
(list python))
|
||
(home-page "https://github.com/jbeder/yaml-cpp")
|
||
(synopsis "YAML parser and emitter in C++")
|
||
(description "YAML parser and emitter in C++ matching the YAML 1.2 spec.")
|
||
(license license:bsd-3)))
|
||
|
||
(define-public jsoncpp
|
||
(package
|
||
(name "jsoncpp")
|
||
(version "1.9.5")
|
||
(home-page "https://github.com/open-source-parsers/jsoncpp")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference (url home-page) (commit version)))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"06zss7z56ykzwcsfdxarmini63hkf8i8gx70q3yw9wb0bw7wj9rv"))))
|
||
(build-system meson-build-system)
|
||
(synopsis "C++ library for interacting with JSON")
|
||
(description "JsonCpp is a C++ library that allows manipulating JSON values,
|
||
including serialization and deserialization to and from strings. It can also
|
||
preserve existing comment in unserialization/serialization steps, making
|
||
it a convenient format to store user input files.")
|
||
(license license:expat)))
|
||
|
||
;; Tensorflow does not build with jsoncpp 1.8.x. It is built with commit
|
||
;; 4356d9bba191e1e16ce7a92073cbf3e63564e973, which lies between version 1.7.2
|
||
;; and 1.7.3.
|
||
(define-public jsoncpp-for-tensorflow
|
||
(package (inherit jsoncpp)
|
||
(name "jsoncpp")
|
||
(version "1.7.3")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/open-source-parsers/jsoncpp")
|
||
(commit version)))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"1180ln8blrb0mwzpcf78k49hlki6di65q77rsvglf83kfcyh4d7z"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
(list #:configure-flags
|
||
#~'("-DBUILD_SHARED_LIBS:BOOL=YES"
|
||
#$@(if (%current-target-system)
|
||
#~("-DJSONCPP_WITH_POST_BUILD_UNITTEST=OFF")
|
||
#~()))))))
|
||
|
||
(define-public json.sh
|
||
(let ((commit "0d5e5c77365f63809bf6e77ef44a1f34b0e05840") ;no releases
|
||
(revision "1"))
|
||
(package
|
||
(name "json.sh")
|
||
(version (git-version "0.0.0" revision commit))
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/dominictarr/JSON.sh")
|
||
(commit commit)))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"14lxvp5xbdk0dcwkjbdp098z1108j8z48zaibndh4i731kkcz43i"))))
|
||
(build-system copy-build-system)
|
||
(arguments
|
||
`(#:install-plan '(("JSON.sh" "bin/"))
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'install 'check
|
||
(lambda* (#:key tests? #:allow-other-keys)
|
||
(when tests? (invoke "./all-tests.sh"))
|
||
#t))
|
||
(add-after 'install 'wrap-program
|
||
(lambda* (#:key inputs outputs #:allow-other-keys)
|
||
(wrap-program (string-append (assoc-ref outputs "out") "/bin/JSON.sh")
|
||
`("PATH" ":" prefix
|
||
(,(string-join
|
||
(map (lambda (in) (string-append (assoc-ref inputs in) "/bin"))
|
||
'("grep" "sed"))
|
||
":"))))
|
||
#t)))))
|
||
(inputs
|
||
(list bash-minimal grep sed))
|
||
(synopsis "Pipeable JSON parser written in shell")
|
||
(description
|
||
"This package provides a JSON parser written in shell, compatible with
|
||
ash, Bash, Dash and Zsh. Pipe JSON to it, and it traverses the JSON objects
|
||
and prints out the path to the current object (as a JSON array) and then the
|
||
object, without whitespace.")
|
||
(home-page "https://github.com/dominictarr/JSON.sh")
|
||
(license (list license:expat license:asl2.0))))) ;dual-licensed
|
||
|
||
(define-public capnproto
|
||
(package
|
||
(name "capnproto")
|
||
(version "1.0")
|
||
(source (origin
|
||
(method url-fetch)
|
||
(uri (string-append
|
||
"https://capnproto.org/capnproto-c++-"
|
||
version ".tar.gz"))
|
||
(sha256
|
||
(base32
|
||
"03f1862ljdshg7d0rg3j7jzgm3ip55kzd2y91q7p0racax3hxx6i"))))
|
||
(build-system gnu-build-system)
|
||
(arguments
|
||
`(#:phases
|
||
(modify-phases %standard-phases
|
||
(add-before 'check 'use-tmp-for-temporary-files
|
||
(lambda _
|
||
;; Use /tmp for temporary files, as the default /var/tmp directory
|
||
;; doesn't exist.
|
||
(substitute* "src/kj/filesystem-disk-test.c++"
|
||
(("VAR\\_TMP \"/var/tmp\"")
|
||
"VAR_TMP \"/tmp\"")))))))
|
||
(home-page "https://capnproto.org")
|
||
(synopsis "Capability-based RPC and serialization system")
|
||
(description
|
||
"Cap'n Proto is a very fast data interchange format and capability-based
|
||
RPC system. Think JSON, except binary. Or think Protocol Buffers, except faster.")
|
||
(license license:expat)))
|
||
|
||
(define-public python-msgspec
|
||
(package
|
||
(name "python-msgspec")
|
||
(version "0.16.0")
|
||
(source (origin
|
||
;; There are no tests in the PyPI tarball.
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/jcrist/msgspec")
|
||
(commit version)))
|
||
(file-name (git-file-name name version))
|
||
(modules '((guix build utils)))
|
||
(snippet
|
||
;; Delete autogenerated file, regenerate in a phase.
|
||
'(begin
|
||
(delete-file "msgspec/atof_consts.h")))
|
||
(sha256
|
||
(base32
|
||
"09q567klcv7ly60w9lqip2ffyhrij100ky9igh3p3vqwbml33zb3"))))
|
||
(build-system pyproject-build-system)
|
||
(arguments
|
||
(list
|
||
;; Disable only one failing test.
|
||
;;
|
||
;; AssertionError: msgspec/structs.pyi:7: error: Positional-only
|
||
;; parameters are only supported in Python 3.8 and greater
|
||
#:test-flags #~(list "-k" "not test_mypy")
|
||
#:phases #~(modify-phases %standard-phases
|
||
(add-after 'unpack 'versioneer
|
||
(lambda _
|
||
(invoke "versioneer" "install")
|
||
(substitute* "setup.py"
|
||
(("version=versioneer.get_version\\(),")
|
||
(format #f "version=~s," #$version)))))
|
||
(add-after 'versioneer 'atof-consts
|
||
(lambda _
|
||
(with-directory-excursion "scripts"
|
||
;; Regenerate the autogenerated file.
|
||
(invoke "python" "generate_atof_consts.py")))))))
|
||
(native-inputs (list python-attrs
|
||
python-gcovr
|
||
python-msgpack
|
||
python-mypy
|
||
python-pytest
|
||
python-setuptools-scm
|
||
python-versioneer))
|
||
(propagated-inputs (list python-pyyaml python-tomli python-tomli-w))
|
||
(home-page "https://jcristharif.com/msgspec/")
|
||
(synopsis "Fast serialization/validation library")
|
||
(description "@code{msgspec} is a fast serialization and validation
|
||
library, with builtin support for JSON, MessagePack, YAML, and TOML. It
|
||
includes the following features:
|
||
|
||
@itemize
|
||
@item High performance encoders/decoders for common protocols.
|
||
@item Support for a wide variety of Python types.
|
||
@item Zero-cost schema validation using familiar Python type annotations.
|
||
@item A speedy Struct type for representing structured data.
|
||
@end itemize")
|
||
;; XXX: It might support more architectures but GitHub Actions listed only
|
||
;; two right now. Try to build for the rest supported by Guix. See:
|
||
;; https://github.com/jcrist/msgspec/blob/main/.github/workflows/ci.yml#L83
|
||
(supported-systems (list "x86_64-linux" "aarch64-linux"))
|
||
(license license:bsd-3)))
|
||
|
||
(define-public python-ruamel.yaml
|
||
(package
|
||
(name "python-ruamel.yaml")
|
||
(version "0.16.13")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "ruamel.yaml" version))
|
||
(sha256
|
||
(base32
|
||
"0hm9yg785f46bkrgqknd6fdvmkby9dpzjnm0b63qf0i748acaj5v"))))
|
||
(build-system python-build-system)
|
||
(native-inputs
|
||
(list python-pytest))
|
||
(propagated-inputs
|
||
(list python-ruamel.yaml.clib))
|
||
(arguments
|
||
`(;; TODO: Tests require packaging "ruamel.std.pathlib".
|
||
#:tests? #f))
|
||
(home-page "https://sourceforge.net/projects/ruamel-yaml/")
|
||
(synopsis "YAML 1.2 parser/emitter")
|
||
(description
|
||
"This package provides YAML parser/emitter that supports roundtrip
|
||
preservation of comments, seq/map flow style, and map key order. It
|
||
is a derivative of Kirill Simonov’s PyYAML 3.11. It supports YAML 1.2
|
||
and has round-trip loaders and dumpers. It supports comments. Block
|
||
style and key ordering are kept, so you can diff the source.")
|
||
(license license:expat)))
|
||
|
||
(define-public python-ruamel.yaml.clib
|
||
(package
|
||
(name "python-ruamel.yaml.clib")
|
||
(version "0.2.6")
|
||
(source
|
||
(origin
|
||
;; pypi release code has cythonized code without corresponding source.
|
||
(method hg-fetch)
|
||
(uri (hg-reference
|
||
(url "http://hg.code.sf.net/p/ruamel-yaml-clib/code")
|
||
(changeset version)))
|
||
(file-name (string-append name "-" version "-checkout"))
|
||
(sha256
|
||
(base32
|
||
"05m3y7pjfbaarqbbgw1k6gs6cnnmxnwadjipxvw1aaaqk3s236cs"))
|
||
(modules '((guix build utils)))
|
||
(snippet
|
||
'(begin
|
||
(delete-file "_ruamel_yaml.c")))))
|
||
(build-system python-build-system)
|
||
(arguments
|
||
`(#:tests? #f ; This package is split from python-ruamel.yaml and
|
||
; depends on modules from it for the test suite.
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(delete 'sanity-check) ; Depends on python-ruamel.yaml
|
||
(add-after 'unpack 'cythonize-code
|
||
(lambda _
|
||
(invoke "cython" "_ruamel_yaml.pyx"))))))
|
||
(native-inputs
|
||
(list python-cython))
|
||
(home-page "https://sourceforge.net/p/ruamel-yaml-clib/code/ci/default/tree")
|
||
(synopsis "C version of reader, parser and emitter for ruamel.yaml")
|
||
(description
|
||
"This package provides a C version of the reader, parser and emitter for
|
||
@code{ruamel.yaml} derived from libyaml.")
|
||
(license license:expat)))
|
||
|
||
(define-public python-cbor
|
||
(package
|
||
(name "python-cbor")
|
||
(version "1.0.0")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "cbor" version))
|
||
(sha256
|
||
(base32
|
||
"1dmv163cnslyqccrybkxn0c9s1jk1mmafmgxv75iamnz5lk5l8hk"))))
|
||
(build-system python-build-system)
|
||
(home-page "https://bitbucket.org/bodhisnarkva/cbor")
|
||
(synopsis "Implementation of the Concise Binary Object Representation")
|
||
(description
|
||
"Python-cbor provides an implementation of the Concise Binary Object
|
||
Representation (@dfn{CBOR}). CBOR is comparable to JSON, has a superset of
|
||
JSON's ability, but serializes to a binary format which is smaller and faster
|
||
to generate and parse. The two primary functions are @code{cbor.loads} and
|
||
@code{cbor.dumps}.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public flatbuffers
|
||
(package
|
||
(name "flatbuffers")
|
||
(version "2.0.0")
|
||
(source
|
||
(origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/google/flatbuffers")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name name version))
|
||
(sha256
|
||
(base32
|
||
"1zbf6bdpps8369r1ql00irxrp58jnalycc8jcapb8iqg654vlfz8"))))
|
||
(build-system cmake-build-system)
|
||
(arguments
|
||
'(#:build-type "Release"
|
||
#:configure-flags
|
||
(list "-DFLATBUFFERS_BUILD_SHAREDLIB=ON"
|
||
(string-append "-DCMAKE_INSTALL_LIBDIR="
|
||
(assoc-ref %outputs "out") "/lib"))
|
||
#:phases
|
||
(modify-phases %standard-phases
|
||
(add-after 'unpack 'make-writable
|
||
(lambda _ (for-each make-file-writable (find-files ".")))))))
|
||
(home-page "https://google.github.io/flatbuffers/")
|
||
(synopsis "Memory-efficient serialization library")
|
||
(description "FlatBuffers is a cross-platform serialization library for C++,
|
||
C#, C, Go, Java, JavaScript, PHP, and Python. It was originally created for
|
||
game development and other performance-critical applications.")
|
||
(license license:asl2.0)))
|
||
|
||
(define-public flatbuffers-next
|
||
(package
|
||
(inherit flatbuffers)
|
||
(version "23.1.21")
|
||
(source (origin
|
||
(method git-fetch)
|
||
(uri (git-reference
|
||
(url "https://github.com/google/flatbuffers")
|
||
(commit (string-append "v" version))))
|
||
(file-name (git-file-name "flatbuffers" version))
|
||
(sha256
|
||
(base32
|
||
"1z3a6l8g2y53i5xzraswfs2i0i3kk52zv7nzc2q3fgisbyiri3pz"))))))
|
||
|
||
(define-public flatbuffers-next-shared
|
||
(package
|
||
(inherit flatbuffers-next)
|
||
(name "flatbuffers-shared")
|
||
(version "23.1.21")
|
||
(arguments
|
||
(substitute-keyword-arguments (package-arguments flatbuffers-next)
|
||
((#:configure-flags flags)
|
||
;; Compile with -fPIC, needed for shared lib.
|
||
#~(cons "-DFLATBUFFERS_CXX_FLAGS=-fPIC" #$flags))))))
|
||
|
||
(define-public python-feather-format
|
||
(package
|
||
(name "python-feather-format")
|
||
(version "0.4.1")
|
||
(source
|
||
(origin
|
||
(method url-fetch)
|
||
(uri (pypi-uri "feather-format" version))
|
||
(sha256
|
||
(base32
|
||
"00w9hwz7sj3fkdjc378r066vdy6lpxmn6vfac3qx956k8lvpxxj5"))))
|
||
(build-system python-build-system)
|
||
(propagated-inputs
|
||
(list python-pandas python-pyarrow))
|
||
(home-page "https://github.com/wesm/feather")
|
||
(synopsis "Python wrapper to the Feather file format")
|
||
(description "This package provides a Python wrapper library to the
|
||
Apache Arrow-based Feather binary columnar serialization data frame format.")
|
||
(license license:asl2.0)))
|