guix/gnu/packages
Roel Janssen 94b8ad4490
gnu: Add r-chipseeker.
* gnu/packages/bioconductor.scm (r-chipseeker): New variable.
2021-05-26 10:21:32 +02:00
..
aux-files gnu: linux-libre: Update to 5.12.5. 2021-05-21 11:40:12 -04:00
patches gnu: Remove unnecessary patches for emacs-geiser. 2021-05-25 11:25:00 +02:00
abduco.scm
abiword.scm
accessibility.scm
acct.scm
acl.scm
ada.scm
admin.scm gnu: detox: Update to 1.4.2. 2021-05-20 22:20:01 -05:00
adns.scm
agda.scm
aidc.scm
algebra.scm gnu: giac: Update to 1.7.0-9. 2021-05-21 17:23:01 +02:00
android.scm
animation.scm
anthy.scm
antivirus.scm
apl.scm
apr.scm
arcan.scm
aspell.scm gnu: hunspell-dict-en & variants: Make reproducible. 2021-05-18 17:20:27 +02:00
assembly.scm
astronomy.scm gnu: Add sgp4. 2021-05-07 18:16:59 +02:00
attr.scm
audio.scm gnu: infamous-plugins: Update to 0.3.0. 2021-05-25 09:20:20 +03:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm
avahi.scm
avr.scm
axoloti.scm
backup.scm gnu: disarchive: Fix build when cross-compiling. 2021-05-17 23:27:40 -04:00
base.scm
bash.scm
batik.scm
bdw-gc.scm gnu: libgc: Add variant with '--disable-munmap'. 2021-05-13 00:19:58 +02:00
benchmark.scm gnu: Add interbench. 2021-05-15 13:25:33 +05:30
bioconductor.scm gnu: Add r-chipseeker. 2021-05-26 10:21:32 +02:00
bioinformatics.scm gnu: Add r-phantompeakqualtools. 2021-05-26 09:34:37 +02:00
bison.scm
bittorrent.scm
boost.scm gnu: boost: Migrate uri from bintray. 2021-05-11 12:49:53 +02:00
bootloaders.scm
bootstrap.scm
browser-extensions.scm
build-tools.scm gnu: gn: Build with Python 3. 2021-05-13 12:36:49 +02:00
busybox.scm
c.scm gnu: PackCC: Update to 1.5.0. 2021-05-18 22:23:48 +02:00
calcurse.scm
calendar.scm
ccache.scm gnu: ccache: Update to 4.3. 2021-05-13 00:32:20 +02:00
cdrom.scm
cedille.scm
certs.scm
check.scm gnu: Fix erroneous uses of 'package/inherit'. 2021-05-23 17:49:56 +02:00
chemistry.scm
chez.scm
chicken.scm
chromium.scm gnu: ungoogled-chromium: Update to 90.0.4430.212-0.3184907. 2021-05-13 12:36:49 +02:00
ci.scm gnu: cuirass: Update to 1.0.0-19.e1382f0. 2021-05-25 15:15:56 +02:00
cinnamon.scm
clojure.scm
cluster.scm
cmake.scm
cobol.scm
code.scm gnu: universal-ctags: Update to 5.9.20210509.0. 2021-05-18 22:23:48 +02:00
commencement.scm
compression.scm gnu: squashfs-tools: Prepare for GCC 10. 2021-05-23 17:49:56 +02:00
compton.scm
configuration-management.scm
conky.scm
connman.scm
convmv.scm
cook.scm
coq.scm
cpio.scm
cpp.scm
cppi.scm
cran.scm gnu: Add r-model4you. 2021-05-26 10:00:51 +02:00
crates-graphics.scm
crates-gtk.scm
crates-io.scm gnu: Fix erroneous uses of 'package/inherit'. 2021-05-23 17:49:56 +02:00
cross-base.scm
crypto.scm
cryptsetup.scm
cups.scm gnu: hplip: Update to 3.21.4. 2021-05-13 16:50:49 +02:00
curl.scm
cvassistant.scm
cybersecurity.scm
cyrus-sasl.scm
databases.scm gnu: lmdb: Update to 0.9.29. 2021-05-23 22:39:15 +02:00
datamash.scm
datastructures.scm
dav.scm
dbm.scm
dc.scm
debian.scm
debug.scm
dejagnu.scm
dhall.scm
dico.scm
dictionaries.scm
diffoscope.scm gnu: diffoscope: Update to 175. 2021-05-23 22:39:14 +02:00
digest.scm
direct-connect.scm
disk.scm gnu: hddtemp: Update to 0.4.3. 2021-05-23 22:39:13 +02:00
display-managers.scm
distributed.scm
django.scm gnu: python-django-compressor: Update to 2.4.12.4.1. 2021-05-23 22:39:14 +02:00
djvu.scm
dlang.scm gnu: Fix build for ldc. 2021-05-21 18:05:07 +02:00
dns.scm gnu: bind: Update to 9.16.16. 2021-05-20 10:50:35 +02:00
docbook.scm
docker.scm
documentation.scm gnu: asciidoc: Remove Python 2 variant. 2021-05-18 22:23:49 +02:00
drones.scm
dunst.scm
dvtm.scm
easyrpg.scm
ebook.scm gnu: cozy: Update to 0.9.4. 2021-05-08 23:23:01 +05:30
ed.scm
education.scm gnu: Add kanatest. 2021-05-25 12:11:18 +02:00
efi.scm
electronics.scm
elf.scm
elixir.scm
elm.scm
emacs-xyz.scm gnu: emacs-shell-command+: Update to 2.2.0. 2021-05-25 12:25:59 +02:00
emacs.scm gnu: Fix erroneous uses of 'package/inherit'. 2021-05-23 17:49:56 +02:00
embedded.scm gnu: fc-host-tools: Make installation path patcher more self-maintaining. 2021-05-18 15:55:12 +02:00
emulators.scm gnu: retroarch: Update to 1.9.3. 2021-05-23 22:39:14 +02:00
enchant.scm
engineering.scm gnu: kicad: Fix ngspice support. 2021-05-20 23:45:15 +02:00
enlightenment.scm
entr.scm
erlang.scm
esolangs.scm
fabric-management.scm gnu: ucx: Restore (and adapt) ioctl fallback patch. 2021-05-22 16:04:59 +02:00
fcitx.scm
fcitx5.scm
figlet.scm
file-systems.scm gnu: exfatprogs: Update to 1.1.2. 2021-05-23 22:39:14 +02:00
file.scm
finance.scm gnu: monero-gui: Update to 0.17.2.2. 2021-05-15 12:04:31 +02:00
firmware.scm
flashing-tools.scm
flex.scm
fltk.scm
fonts.scm gnu: font-sarasa-gothic: Update to 0.31.2. 2021-05-24 02:16:48 +02:00
fontutils.scm
forth.scm
fpga.scm gnu: nvc: Update to 1.5.1. 2021-05-23 21:56:21 +02:00
freedesktop.scm gnu: Add seatd. 2021-05-14 14:47:17 +02:00
freeipmi.scm gnu: freeipmi: Update to 1.6.8. 2021-05-23 22:39:14 +02:00
fribidi.scm
ftp.scm gnu: filezilla: Update to 3.54.1. 2021-05-23 21:56:20 +02:00
fvwm.scm
game-development.scm gnu: ois: Update to 1.5.1. 2021-05-23 21:56:20 +02:00
games.scm gnu: openttd-engine: Update to 1.11.2. 2021-05-25 12:07:32 +02:00
gawk.scm
gcal.scm
gcc.scm gnu: gcc-8: Update to 8.5.0. 2021-05-15 22:43:15 +03:00
gd.scm
gdb.scm
genealogy.scm
genimage.scm
geo.scm
gettext.scm
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm
glib.scm gnu: perl-net-dbus: Update to 1.2.0. 2021-05-19 22:40:13 +03:00
gnome-xyz.scm
gnome.scm gnu: mm-common: Update to 1.0.3. 2021-05-23 22:39:15 +02:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm
gnupg.scm
gnustep.scm
gnuzilla.scm gnu: icecat: Validate runpath. 2021-05-10 09:21:56 +03:00
gobby.scm
golang.scm
gperf.scm
gpodder.scm
gps.scm
graph.scm gnu: Add python-graph-tool. 2021-05-15 19:18:46 +02:00
graphics.scm gnu: autotrace: Prepare for GLib 2.68 and later. 2021-05-22 17:14:17 +02:00
graphviz.scm gnu: Graphviz: Fix CVE-2020-18032. 2021-05-15 17:04:01 -04:00
groff.scm
groovy.scm
gsasl.scm
gstreamer.scm
gtk.scm gnu: perl-cairo: Update to 1.109. 2021-05-18 23:07:46 +03:00
guile-wm.scm
guile-xyz.scm gnu: guile-redis: Update to 2.1.1. 2021-05-19 23:11:17 +02:00
guile.scm gnu: Fix erroneous uses of 'package/inherit'. 2021-05-23 17:49:56 +02:00
gv.scm
gxmessage.scm
hardware.scm
haskell-apps.scm
haskell-check.scm
haskell-crypto.scm
haskell-web.scm
haskell-xyz.scm
haskell.scm
heads.scm
hexedit.scm
hugs.scm
hunspell.scm
hurd.scm gnu: Remove unneeded import. 2021-05-17 23:59:58 +02:00
hyperledger.scm
i2p.scm gnu: i2pd: Allow skipping tests. 2021-05-25 09:07:53 +03:00
ibus.scm
icu4c.scm
idris.scm
idutils.scm
image-processing.scm
image-viewers.scm
image.scm
imagemagick.scm
inklingreader.scm
inkscape.scm
installers.scm
ipfs.scm
irc.scm
iso-codes.scm
jami.scm
java-compression.scm
java-graphics.scm
java-maths.scm
java.scm
javascript.scm
jemalloc.scm
jose.scm gnu: jose: Update to 11. 2021-05-18 16:37:22 +02:00
jrnl.scm
julia-xyz.scm gnu: Add julia-recipesbase. 2021-05-20 17:12:26 +03:00
julia.scm
jupyter.scm
kawa.scm
kde-frameworks.scm
kde-internet.scm
kde-multimedia.scm
kde-pim.scm
kde-plasma.scm
kde-systemtools.scm
kde-utils.scm
kde.scm
kerberos.scm
key-mon.scm
kodi.scm
language.scm
ld-wrapper.in
lean.scm
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm gnu: libetonyek: Update to 0.1.10. 2021-05-23 22:39:15 +02:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm
license.scm
lighting.scm
linphone.scm
linux.scm gnu: linux-libre 4.4: Update to 4.4.269. 2021-05-24 13:51:49 -04:00
lirc.scm
lisp-xyz.scm gnu: Add cl-djula. 2021-05-25 11:16:55 +02:00
lisp.scm gnu: txr: Update to 259. 2021-05-20 14:10:31 +02:00
llvm.scm
logging.scm
logo.scm
loko.scm
lout.scm
lsof.scm
lua.scm
lxde.scm
lxqt.scm
m4.scm
machine-learning.scm
magic-wormhole.scm
mail.scm gnu: abook: Fix typo in description. 2021-05-23 22:39:13 +02:00
make-bootstrap.scm
man.scm
markup.scm gnu: md4c: Update to 0.4.8. 2021-05-23 22:39:15 +02:00
marst.scm
mastodon.scm
mate.scm
maths.scm gnu: qhull: Build position independent. 2021-05-25 17:24:58 +03:00
matrix.scm
maven-parent-pom.scm
maven.scm
mc.scm
mcrypt.scm
medical.scm
mercury.scm
mes.scm
messaging.scm gnu: libsignal-protocol-c: Update to 2.3.3. 2021-05-24 02:08:35 +02:00
microcom.scm
mingw.scm
moe.scm
monitoring.scm
mono.scm
moreutils.scm
motti.scm
mp3.scm
mpd.scm
mpi.scm
mtools.scm
multiprecision.scm
music.scm gnu: zam-plugins: Update source hash. 2021-05-22 21:57:45 +02:00
musl.scm
nano.scm
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: frrouting: Update to 7.5.17.5.1. 2021-05-24 02:08:35 +02:00
nfs.scm
nickle.scm
nicotine.scm
nim.scm
ninja.scm
node-xyz.scm
node.scm
noweb.scm
nss.scm
ntp.scm gnu: ntp: Prepare for GCC 10. 2021-05-22 16:04:58 +02:00
nutrition.scm
nvi.scm
ocaml.scm gnu: ocaml: Depend on libiberty. 2021-05-08 14:55:49 +02:00
ocr.scm
onc-rpc.scm gnu: rpcbind: Update to 1.2.6. 2021-05-13 01:15:10 +02:00
openbox.scm
opencl.scm
opencog.scm
openkinect.scm
openldap.scm
openpgp.scm
openstack.scm
orange.scm
orpheus.scm
ots.scm
package-management.scm gnu: guix: Update to 9f2b2c4. 2021-05-22 09:18:54 +01:00
pantheon.scm
parallel.scm gnu: parallel: Update to 20210522. 2021-05-23 22:39:13 +02:00
pascal.scm
password-utils.scm
patchutils.scm
pciutils.scm
pcre.scm
pdf.scm gnu: img2pdf: Update to 0.4.1. 2021-05-09 21:53:12 +02:00
pem.scm
pep.scm
perl-check.scm
perl-compression.scm gnu: perl-archive-extract: Update to 0.88. 2021-05-18 23:07:08 +03:00
perl-maths.scm
perl-web.scm gnu: perl-mojolicious: Update to 9.17. 2021-05-19 22:49:33 +03:00
perl.scm gnu: Add perl-set-intervaltree. 2021-05-25 14:31:06 +02:00
perl6.scm
phabricator.scm
photo.scm gnu: ExifTool: Fix CVE-2021-22204 2021-05-09 10:42:18 -04:00
php.scm
piet.scm
pkg-config.scm
plotutils.scm
poedit.scm
polkit.scm
popt.scm
presentation.scm
pretty-print.scm
printers.scm
profiling.scm
prolog.scm
protobuf.scm gnu: Fix erroneous uses of 'package/inherit'. 2021-05-23 17:49:56 +02:00
pth.scm
pulseaudio.scm
pumpio.scm
pure.scm
purescript.scm
pv.scm
python-build.scm
python-check.scm gnu: Add python-tappy. 2021-05-17 22:55:33 -04:00
python-compression.scm
python-crypto.scm
python-science.scm
python-web.scm gnu: Fix erroneous uses of 'package/inherit'. 2021-05-23 17:49:56 +02:00
python-xyz.scm gnu: python2-shapely: Remove package. 2021-05-25 01:15:08 +02:00
python.scm
qt.scm gnu: Add qcustomplot. 2021-05-19 08:55:51 +02:00
racket.scm gnu: Fix erroneous uses of 'package/inherit'. 2021-05-23 17:49:56 +02:00
radio.scm gnu: rtl-433: Update to 21.05. 2021-05-19 18:15:38 +02:00
ragel.scm
rails.scm
raspberry-pi.scm
ratpoison.scm
rcm.scm
rdesktop.scm
rdf.scm
re2c.scm gnu: re2c: Update to 2.1.1. 2021-05-15 23:17:33 +03:00
readline.scm
rednotebook.scm
regex.scm
robotics.scm
rpc.scm
rrdtool.scm
rsync.scm gnu: Add rsync 3.2.3. 2021-05-25 16:32:52 -04:00
ruby.scm gnu: Add ruby-yaml-lint. 2021-05-11 13:51:40 +03:00
rush.scm
rust-apps.scm gnu: bat: Update to 0.18.1. 2021-05-14 17:33:21 +02:00
rust.scm gnu: Add Rust 1.52.1. 2021-05-19 18:32:02 +02:00
sagemath.scm
samba.scm
sawfish.scm
scanner.scm
scheme.scm
screen.scm
scribus.scm
scsi.scm
sdl.scm gnu: guile-sdl2: Update to 0.6.0. 2021-05-15 10:14:48 +02:00
search.scm
security-token.scm gnu: yubikey-personalization: Fix build with GCC 10. 2021-05-18 22:23:48 +02:00
selinux.scm
sequoia.scm gnu: Fix erroneous uses of 'package/inherit'. 2021-05-23 17:49:56 +02:00
serialization.scm
serveez.scm
shells.scm gnu: nushell: Update to 0.31.0. 2021-05-14 17:03:45 +02:00
shellutils.scm
simh.scm
simulation.scm
skarnet.scm
skribilo.scm
slang.scm
smalltalk.scm
sml.scm
speech.scm
sphinx.scm gnu: python-breathe: Update to 4.30.0. 2021-05-24 22:02:40 +02:00
spice.scm Merge branch 'version-1.3.0' 2021-05-11 22:42:59 -04:00
sqlite.scm
squirrel.scm
ssh.scm
sssd.scm
stalonetray.scm
statistics.scm gnu: Add emacs-poly-r. 2021-05-22 07:14:29 +02:00
stb.scm
stenography.scm
storage.scm
suckless.scm gnu: surf: Update to 2.1. 2021-05-24 01:28:19 +02:00
swig.scm
sync.scm
syncthing.scm
syndication.scm gnu: Add cawbird. 2021-05-14 00:04:54 -04:00
synergy.scm
task-management.scm
task-runners.scm
tbb.scm
tcl.scm
telegram.scm
telephony.scm
terminals.scm gnu: alacritty: Update to 0.7.2. 2021-05-14 21:08:07 +02:00
terraform.scm
tex.scm
texinfo.scm
text-editors.scm gnu: texmacs: Update to 1.99.20. 2021-05-07 17:34:29 +02:00
textutils.scm
time.scm
tls.scm gnu: OpenSSL: Replace with 1.1.1k [fixes CVE-2021-3449 and CVE-2021-3450]. 2021-05-23 17:49:57 +02:00
tmux.scm
tor.scm gnu: tor: Update to 0.4.5.8. 2021-05-10 18:20:15 +03:00
toys.scm
tryton.scm
tv.scm
uml.scm
unicode.scm
unrtf.scm
upnp.scm gnu: libupnp: Update to 1.14.7. 2021-05-13 00:32:22 +02:00
usb-modeswitch.scm
uucp.scm
valgrind.scm
version-control.scm gnu: asciidoc: Remove Python 2 variant. 2021-05-18 22:23:49 +02:00
video.scm gnu: dav1d: Update to 0.9.0. 2021-05-20 12:42:59 -04:00
vim.scm gnu: Add vim-solarized. 2021-05-15 14:55:34 +02:00
virtualization.scm gnu: python-libvirt: Update to 7.3.0. 2021-05-18 16:37:21 +02:00
visidata.scm
vlang.scm
vnc.scm gnu: Add remmina. 2021-05-11 18:24:48 -04:00
vpn.scm
vulkan.scm
w3m.scm
wdiff.scm
web-browsers.scm gnu: lagrange: Update to 1.4.2. 2021-05-25 11:31:18 +02:00
web.scm gnu: nginx: Update to 1.21.0 [fixes CVE-2021-23017]. 2021-05-25 12:44:09 -04:00
webkit.scm gnu: webkitgtk: Update to 2.32.1. 2021-05-13 00:32:23 +02:00
wget.scm
wicd.scm
wine.scm gnu: wine: Update to 6.8. 2021-05-08 17:48:25 +02:00
wireservice.scm
wm.scm gnu: asciidoc: Remove Python 2 variant. 2021-05-18 22:23:49 +02:00
wordnet.scm
wv.scm
wxwidgets.scm
xdisorg.scm gnu: Add xdo. 2021-05-22 23:50:11 +02:00
xfce.scm gnu: xfce4-screenshooter: Update to 1.9.9. 2021-05-21 12:21:14 -04:00
xfig.scm
xiph.scm
xml.scm gnu: Add libxml2-xpath0. 2021-05-18 22:23:49 +02:00
xnee.scm
xorg.scm gnu: libx11: Update replacement to 1.7.1 [fixes CVE-2021-31535]. 2021-05-23 17:49:57 +02:00
zile.scm
zwave.scm