guix/gnu/packages
Ricardo Wurmus 9488776a18
gnu: python-pysam: Update to 0.10.0.
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.10.0.
2017-03-22 12:21:38 +01:00
..
aux-files gnu: emacs: Simplify "guix-emacs.el". 2017-02-27 16:44:58 +03:00
bootstrap gnu: Add bootstrap-binaries for 'aarch64-linux'. 2017-02-20 12:58:07 +02:00
patches Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
abduco.scm
abiword.scm
acct.scm
acl.scm
admin.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-16 13:11:28 +02:00
adns.scm
aidc.scm
algebra.scm gnu: giac-xcas: Update to 1.2.3-25. 2017-03-06 14:49:58 +01:00
animation.scm
anthy.scm
apl.scm gnu: apl: Update to 1.7. 2017-03-18 21:28:20 +02:00
apr.scm
aspell.scm
assembly.scm
astronomy.scm gnu: Add comments on why setting QT_QPA_PLATFORM for tests. 2017-03-20 20:56:49 +01:00
attr.scm
audacity.scm gnu: audacity: Use gtk+@3. 2017-03-20 18:04:01 +02:00
audio.scm gnu: jack-2: Fix build by patching fast_rand. 2017-03-16 09:41:20 +01:00
augeas.scm
autogen.scm
autotools.scm
avahi.scm
avr.scm
backup.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
base.scm gnu: Add a tzdata variant for testing purposes. 2017-03-12 20:45:46 -04:00
bash.scm Merge branch 'master' into core-updates 2017-03-09 16:35:41 +01:00
bdw-gc.scm
benchmark.scm gnu: fio: Update to 2.18. 2017-02-24 19:44:10 +01:00
bioinformatics.scm gnu: python-pysam: Update to 0.10.0. 2017-03-22 12:21:38 +01:00
bison.scm
bittorrent.scm gnu: aria2: Update to 1.31.0. 2017-03-14 15:05:27 +02:00
boost.scm
bootloaders.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
bootstrap.scm Merge branch 'master' into core-updates 2017-03-09 16:35:41 +01:00
busybox.scm
c.scm
calcurse.scm
calendar.scm gnu: libical: Fix substitution of path to time zone database. 2017-03-12 20:45:46 -04:00
ccache.scm
cdrom.scm gnu: Add ccd2cue 2017-02-28 18:55:11 +01:00
certs.scm gnu: nss, nss-certs: Update to 3.29.3. 2017-03-15 17:57:51 +01:00
check.scm gnu: googletest: Update to 1.8.0. 2017-03-03 17:57:23 +10:00
chez.scm
ci.scm gnu: cuirass: Update to 0.0.1 revision 5. 2017-03-11 22:23:28 +01:00
cmake.scm gnu: cmake: Run tests in parallel. 2017-02-21 14:50:51 +01:00
code.scm gnu: Use INSTALL-FILE where appropriate. 2017-03-15 22:19:39 +01:00
commencement.scm
compression.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-16 13:11:28 +02:00
compton.scm gnu: Adjust asciidoc-related build options. 2017-03-21 11:15:08 -04:00
conkeror.scm
conky.scm gnu: Use INSTALL-FILE where appropriate. 2017-03-15 22:19:39 +01:00
connman.scm
cook.scm
cpio.scm
cppi.scm
cross-base.scm
crypto.scm
cryptsetup.scm gnu: cryptsetup: Update to 1.7.4. 2017-03-15 22:19:39 +01:00
cups.scm gnu: cups: Fix build failure in reset-gzip-timestamps phase. 2017-02-28 02:09:50 -05:00
curl.scm Merge branch 'master' into core-updates 2017-03-09 16:35:41 +01:00
cyrus-sasl.scm
databases.scm Merge branch 'master' into core-updates 2017-03-15 17:52:26 +01:00
datamash.scm
datastructures.scm gnu: Add liburcu. 2017-03-17 02:32:00 +01:00
dav.scm gnu: vdirsyncer: Update to 0.15.0. 2017-03-01 22:33:11 -05:00
dc.scm
debug.scm gnu: Use INSTALL-FILE where appropriate. 2017-03-15 22:19:39 +01:00
dejagnu.scm
dico.scm
dictionaries.scm
dillo.scm
disk.scm gnu: gparted: Update to 0.28.1. 2017-02-24 16:39:41 +01:00
display-managers.scm gnu: greenisland: Update to 0.9.0.1. 2017-03-21 01:13:06 +01:00
django.scm
djvu.scm
dns.scm gnu: dns: Return #t instead of something undefined. 2017-03-22 02:03:31 +01:00
docbook.scm
docker.scm
documentation.scm Merge branch 'master' into core-updates 2017-03-19 18:52:12 -04:00
dunst.scm
dvtm.scm
ebook.scm
ed.scm
education.scm gnu: Merge the two stellaria into one. 2017-03-02 18:02:26 +01:00
elf.scm gnu: libelf: Use 'modify-phases'. 2017-02-21 21:14:48 +02:00
elixir.scm
emacs.scm gnu: emacs-slime: Update to 2.19. 2017-03-18 01:49:38 +01:00
embedded.scm gnu: Add binutils-vc4. 2017-03-05 13:49:12 +01:00
enchant.scm
engineering.scm gnu: Use INSTALL-FILE where appropriate. 2017-03-15 22:19:39 +01:00
enlightenment.scm Merge branch 'python-tests' 2017-03-03 16:55:43 +01:00
entr.scm
erlang.scm
fcitx.scm
figlet.scm
file.scm
finance.scm gnu: bitcoin-core: Update to 0.14.0. 2017-03-15 15:48:43 -04:00
firmware.scm
flashing-tools.scm
flex.scm gnu: Add flex-2.6.1. 2017-03-08 00:07:07 -05:00
fltk.scm
fonts.scm gnu: Add font-tamzen. 2017-03-09 19:23:07 -05:00
fontutils.scm gnu: graphite2: Fix test failure caused by rounding error on 32-bit CPUs. 2017-03-19 17:32:44 -04:00
fpga.scm gnu: icestorm: Replace reference in icebox_vlog. 2017-03-10 21:15:39 +01:00
freedesktop.scm gnu: elogind: Build with gperf 3.0. 2017-03-19 23:42:57 +01:00
freeipmi.scm
fribidi.scm
ftp.scm gnu: filezilla: Update to 3.24.1. 2017-03-04 23:15:06 -05:00
fvwm.scm
game-development.scm gnu: Add deutex. 2017-03-19 21:43:05 -04:00
games.scm gnu: Add megaglest. 2017-03-21 15:15:35 -04:00
gawk.scm
gcal.scm
gcc.scm gnu: gcc: Force Aarch64 to use /lib. 2017-03-06 11:34:46 +02:00
gd.scm gnu: gd: Fix an issue with XBM decoding. 2017-03-03 14:12:30 -05:00
gdb.scm
geo.scm
gettext.scm
gforth.scm
ghostscript.scm Merge branch 'master' into core-updates 2017-03-09 16:35:41 +01:00
gimp.scm
gkrellm.scm
gl.scm gnu: mesa: Correct another typo. 2017-03-20 21:44:00 +02:00
glib.scm gnu: Add a tzdata variant for testing purposes. 2017-03-12 20:45:46 -04:00
gnome.scm gnu: simple-scan: Update to 3.24.0. 2017-03-20 22:44:05 +01:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm gnu: gnurl: Update to 7.53.1. 2017-02-24 11:55:55 -05:00
gnupg.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-13 23:08:49 +02:00
gnustep.scm gnu: windowmaker: Use modify-phases syntax. 2017-03-14 12:10:16 -04:00
gnuzilla.scm Merge branch 'master' into core-updates 2017-03-19 18:52:12 -04:00
gobby.scm
golang.scm gnu: go@1.4, go@1.7: Skip test that fails with tzdata-2017a. 2017-03-21 01:30:39 -04:00
gperf.scm gnu: elogind: Build with gperf 3.0. 2017-03-19 23:42:57 +01:00
gprolog.scm
gps.scm
graphics.scm
graphviz.scm
groff.scm
gsasl.scm
gstreamer.scm gnu: python-gst: Update to 1.10.4. 2017-02-27 04:04:52 -05:00
gtk.scm Merge branch 'master' into core-updates 2017-03-15 17:52:26 +01:00
guile-wm.scm
guile.scm Merge branch 'master' into core-updates 2017-03-19 18:52:12 -04:00
gv.scm
gxmessage.scm
haskell.scm gnu: Add ghc-unexceptionalio. 2017-03-11 12:43:36 +01:00
hexedit.scm
hugs.scm
hurd.scm gnu: Add GNU Mach. 2017-03-19 18:14:22 +01:00
ibus.scm gnu: ibus-anthy: Update to 1.5.9. 2017-03-09 22:49:38 +01:00
icu4c.scm
idris.scm
idutils.scm
image-viewers.scm gnu: catimg: Update to 2.2.2. 2017-03-03 02:04:26 +01:00
image.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
imagemagick.scm gnu: imagemagick: Update to 6.9.7-10. 2017-03-11 12:35:57 -05:00
indent.scm
inklingreader.scm
inkscape.scm
irc.scm bug#26152: [PATCH] gnu: limnoria: Update to 20170110. 2017-03-18 11:51:21 +01:00
iso-codes.scm
java.scm gnu: java-xz: Update to 1.6. 2017-03-07 17:27:30 +01:00
jemalloc.scm gnu: jemalloc: Update to 4.5.0. 2017-03-01 20:41:41 +01:00
jrnl.scm
julia.scm
kde-frameworks.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
kde.scm gnu: kdevelop: Upgrade to 5.0.4. 2017-03-07 23:21:59 +01:00
kerberos.scm
key-mon.scm
kodi.scm gnu: kodi: Wrap executable so it finds libcurl. 2017-03-21 12:37:41 +01:00
language.scm
ld-wrapper.in
ldc.scm gnu: dub: Update to 1.2.2. 2017-03-10 19:39:52 +01:00
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm Merge branch 'master' into core-updates 2017-03-19 18:52:12 -04:00
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm gnu: libidn2: Create 'pkg-config' file. 2017-03-14 21:29:27 +01:00
libphidget.scm
libreoffice.scm gnu: libcmis: Update to 0.5.1. 2017-03-21 13:38:13 -04:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libupnp.scm
libusb.scm
lighting.scm gnu: ola: Update to 0.10.3. 2017-02-22 08:13:01 +01:00
links.scm
linux.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
lirc.scm
lisp.scm gnu: ecl: Update to 16.1.3. 2017-03-12 23:47:40 -04:00
llvm.scm
logging.scm
lolcode.scm
lout.scm
lsof.scm
lua.scm gnu: luajit: Update to 2.1.0-beta2. 2017-03-13 21:47:30 +02:00
lxde.scm
lxqt.scm
lynx.scm
m4.scm
machine-learning.scm gnu: Add ocaml-mcl. 2017-03-17 21:43:27 +10:00
mail.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
make-bootstrap.scm
man.scm gnu: man-pages: Update to 4.10. 2017-03-15 22:19:38 +01:00
markdown.scm gnu: cmark: Update to 0.27.1. 2017-03-03 02:06:57 +01:00
marst.scm
mate.scm
maths.scm gnu: openblas: Add support for aarch64. 2017-03-21 22:03:05 +02:00
mc.scm
mcrypt.scm
messaging.scm gnu: ngircd: Use HTTPS. 2017-03-20 22:44:06 +01:00
mg.scm
microcom.scm
mingw.scm
moe.scm
monitoring.scm
mono.scm
moreutils.scm
mp3.scm gnu: mp3splt: Update to 2.6.2. 2017-03-05 13:12:03 -05:00
mpd.scm gnu: mpd: Update to 0.20.6. 2017-03-19 21:55:09 -04:00
mpi.scm
mtools.scm
multiprecision.scm
music.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
musl.scm
nano.scm gnu: nano: Update to 2.7.5. 2017-03-02 12:39:26 +02:00
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: Add tftp-hpa. 2017-03-15 18:24:30 -04:00
nfs.scm
nickle.scm
nim.scm
ninja.scm gnu: ninja: Update to 1.7.2. 2017-03-17 20:41:15 +01:00
node.scm
noweb.scm
ntp.scm gnu: ntp: Update to 4.2.8p10 [security fixes]. 2017-03-22 01:41:41 -04:00
nutrition.scm
nvi.scm
ocaml.scm gnu: ocaml-qtest: Update to 2.5. 2017-03-18 09:52:29 +10:00
ocr.scm
onc-rpc.scm
openbox.scm
openldap.scm
openstack.scm gnu: python2-reno: Disable tests. 2017-02-24 21:37:03 +01:00
orpheus.scm
ots.scm gnu: ots: Use 'modify-phases' syntax. 2017-03-21 20:58:52 +02:00
package-management.scm gnu: guix: Don't ignore user's GUILE_LOAD_COMPILED_PATH. 2017-03-18 18:26:11 +01:00
parallel.scm
password-utils.scm gnu: password-store: Fix compatibility with GnuPG 2.1.19. 2017-03-16 19:58:43 +01:00
patchutils.scm
pciutils.scm gnu: pciutils: Update to 3.5.4. 2017-02-27 00:03:37 +01:00
pcre.scm Merge branch 'master' into core-updates 2017-03-09 16:35:41 +01:00
pdf.scm Merge branch 'master' into core-updates 2017-03-19 18:52:12 -04:00
pem.scm
perl-web.scm
perl.scm gnu: Add perl-ole-storage-lite. 2017-03-21 12:55:47 +01:00
photo.scm gnu: Add lensfun. 2017-03-08 23:49:24 +01:00
php.scm gnu: php: Update to 7.1.3. 2017-03-20 23:09:22 +01:00
pkg-config.scm
plotutils.scm gnu: asymptote: Update to 2.40. 2017-03-07 20:02:04 +08:00
polkit.scm
popt.scm
pretty-print.scm gnu: Add fmt. 2017-03-20 23:35:39 +01:00
protobuf.scm
pth.scm gnu: pth: Add support for aarch64. 2017-03-02 11:51:43 +02:00
pulseaudio.scm gnu: pulseaudio: Update to 10.0. 2017-03-08 16:17:24 +01:00
pumpio.scm
pv.scm
python.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
qemu.scm Merge branch 'master' into core-updates 2017-03-19 18:52:12 -04:00
qt.scm gnu: Add comments on why setting QT_QPA_PLATFORM for tests. 2017-03-20 20:56:49 +01:00
ragel.scm
rails.scm
ratpoison.scm
rdesktop.scm
rdf.scm
re2c.scm
readline.scm
regex.scm gnu: re2: Set CXX for cross-compilation. 2017-03-11 22:23:28 +01:00
rrdtool.scm
rsync.scm
ruby.scm gnu: ruby-coderay: Update to 1.1.1. 2017-03-05 09:17:12 +10:00
rush.scm
rust.scm gnu: rustc: Fix process test. 2017-03-18 10:37:02 +01:00
samba.scm
sawfish.scm gnu: librep: Update to 0.92.6. 2017-03-19 23:42:58 +01:00
scanner.scm
scheme.scm gnu: Add scm. 2017-03-02 18:17:22 +01:00
screen.scm gnu: screen: Update to 4.5.1. 2017-02-28 21:01:26 +02:00
scribus.scm
scsi.scm
sdcc.scm
sdl.scm
search.scm
security-token.scm
serialization.scm
serveez.scm
shells.scm Merge branch 'master' into core-updates 2017-03-09 16:35:41 +01:00
shellutils.scm gnu: direnv: Update to 2.11.3. 2017-03-15 03:45:57 +01:00
simh.scm
skarnet.scm
skribilo.scm gnu: guile-reader: Default to Guile 2.2. 2017-03-19 18:14:22 +01:00
slang.scm
smalltalk.scm
speech.scm
spice.scm gnu: virglrenderer: Fix CVE-2017-6386. 2017-03-16 19:39:55 -04:00
ssh.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
stalonetray.scm
statistics.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
suckless.scm gnu: Add blind. 2017-03-07 19:41:23 +08:00
swig.scm
sync.scm
syndication.scm
synergy.scm
task-management.scm
tbb.scm
tcl.scm
telephony.scm gnu: mumble: Build with 'murmur' server component. 2017-03-01 09:41:36 -05:00
terminals.scm
tex.scm gnu: texlive: Fix CVE-2016-10243. 2017-03-06 16:47:37 -05:00
texinfo.scm
text-editors.scm gnu: Adjust asciidoc-related build options. 2017-03-21 11:15:08 -04:00
textutils.scm
time.scm
tls.scm Merge branch 'master' into core-updates 2017-03-19 18:52:12 -04:00
tmux.scm
tor.scm gnu: tor: Update to 0.2.9.10. 2017-03-03 14:25:52 +01:00
tv.scm
uml.scm
unrtf.scm
upnp.scm
uucp.scm
valgrind.scm
version-control.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
video.scm Merge remote-tracking branch 'origin/master' into core-updates 2017-03-22 12:57:37 +02:00
vim.scm gnu: vim: Update to 8.0.0494. 2017-03-20 23:35:39 +01:00
vpn.scm
vtk.scm
w3m.scm gnu: w3m: Update to 0.5.3+git20170102 [security fixes]. 2017-03-14 18:26:28 -04:00
wdiff.scm
web.scm gnu: Adjust asciidoc-related build options. 2017-03-21 11:15:08 -04:00
webkit.scm
wget.scm gnu: wget: Fix test-504 failures. 2017-03-20 20:07:56 +02:00
wicd.scm
wine.scm gnu: wine: Update to 2.4. 2017-03-18 17:26:02 +01:00
wm.scm gnu: Adjust asciidoc-related build options. 2017-03-21 11:15:08 -04:00
wordnet.scm
wv.scm
wxwidgets.scm gnu: Remove wxwidgets@2.8. 2017-03-20 18:33:30 +02:00
xdisorg.scm Merge branch 'master' into core-updates 2017-03-09 16:35:41 +01:00
xfce.scm
xfig.scm
xiph.scm Merge branch 'staging' into core-updates 2017-02-21 14:31:36 +01:00
xml.scm Merge branch 'master' into core-updates 2017-03-09 16:35:41 +01:00
xnee.scm
xorg.scm gnu: xf86-video-vmware: Fix build failure due to missing LLVM. 2017-03-21 14:24:37 -04:00
zile.scm
zip.scm