guix/gnu/packages
Ben Woodcroft 93b8316e08
gnu: mafft: Update to 7.300.
* gnu/packages/bioinformatics.scm (mafft): Update to 7.300.
2016-08-15 20:51:00 +10:00
..
bootstrap
patches gnu: jq: Fix CVE-2015-8863. 2016-08-11 15:42:32 -04:00
abduco.scm
abiword.scm
acct.scm
acl.scm
admin.scm gnu: Add cbatticon. 2016-08-10 22:39:14 +02:00
adns.scm gnu: adns: Update to 1.5.1. 2016-08-13 20:24:43 +03:00
aidc.scm
algebra.scm Rename references to (gnu packages tcsh). 2016-08-03 16:22:31 +02:00
animation.scm
anthy.scm
apl.scm
apr.scm
aspell.scm
assembly.scm
attr.scm
audacity.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
audio.scm gnu: ardour: Add cppunit and readline to inputs. 2016-08-14 16:03:42 +02:00
augeas.scm
autogen.scm
autotools.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
avahi.scm
avr.scm
backup.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
base.scm Merge branch 'core-updates' 2016-08-04 08:17:05 -04:00
bash.scm gnu: bash-completion: Update to 2.3. Update the patch. 2016-08-09 09:23:38 +02:00
bdw-gc.scm
benchmark.scm gnu: Add fio. 2016-08-14 13:05:03 -04:00
bioinformatics.scm gnu: mafft: Update to 7.300. 2016-08-15 20:51:00 +10:00
bison.scm gnu: Use define-public to export packages. 2016-07-29 17:35:20 +02:00
bittorrent.scm gnu: aria2: Update to 1.25.0. 2016-07-20 06:49:44 +03:00
boost.scm Merge branch 'core-updates' 2016-08-04 08:17:05 -04:00
bootstrap.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
busybox.scm
c.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
calcurse.scm
calendar.scm
ccache.scm gnu: ccache: Update to 3.2.5. 2016-07-10 06:48:27 +03:00
cdrom.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
certs.scm gnu: nss-certs: Stop inheriting from nss package. 2016-07-22 17:10:11 +02:00
check.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
ci.scm
cmake.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
code.scm gnu: Add trio. 2016-08-01 14:06:03 +02:00
commencement.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
compression.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
conkeror.scm
conky.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
connman.scm
cook.scm gnu: cook: Update source URL. 2016-07-23 22:19:11 +02:00
cpio.scm
cppi.scm
cross-base.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
crypto.scm gnu: Add encfs. 2016-07-16 14:41:39 +02:00
cryptsetup.scm
cups.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
curl.scm gnu: curl: Replace with 7.50.1 [fixes CVE-2016-{3739,4802,5419,5420,5421]. 2016-08-04 12:57:36 -04:00
cyrus-sasl.scm
databases.scm gnu: redis: Update to 3.2.3 [fixes CVE-2013-7458]. 2016-08-14 13:54:02 -04:00
datamash.scm
datastructures.scm gnu: Add ssdeep. 2016-07-19 23:03:30 +02:00
dav.scm gnu: vdirsyncer: Update to 0.11.3. 2016-08-01 21:06:42 -04:00
dc.scm
debug.scm gnu: Add stress-make. 2016-08-13 11:00:45 -05:00
dejagnu.scm
dico.scm gnu: dico: Update to 2.3. 2016-08-11 13:20:12 +03:00
dictionaries.scm
dillo.scm
disk.scm Update e-mail address for Tobias Geerinckx-Rice. 2016-07-15 14:29:22 +02:00
djvu.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
dns.scm
docbook.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
docker.scm
documentation.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
dunst.scm
dvtm.scm
ebook.scm gnu: calibre: Update to 2.63.0. 2016-07-27 23:45:16 +02:00
ed.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
education.scm gnu: Add GCompris. 2016-08-03 18:50:26 +02:00
elf.scm
elixir.scm gnu: Add Elixir. 2016-08-02 18:31:29 +02:00
emacs.scm gnu: Add emacs-neotree. 2016-08-11 18:12:41 +03:00
enchant.scm
engineering.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
enlightenment.scm gnu: enlightenment: Update to 0.21.1. 2016-07-22 18:24:22 +03:00
entr.scm
erlang.scm
fcitx.scm
feh.scm
figlet.scm
file.scm
finance.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
firmware.scm
flashing-tools.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
flex.scm gnu: Use define-public to export packages. 2016-07-29 17:35:20 +02:00
fltk.scm
fonts.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
fontutils.scm gnu: fontconfig: Fix CVE-2016-5384. 2016-08-08 20:33:21 -04:00
freedesktop.scm gnu: Add libinput-minimal. 2016-07-29 17:40:24 +02:00
freeipmi.scm gnu: freeimpi: Update to 1.5.3. 2016-08-11 13:20:16 +03:00
fribidi.scm
ftp.scm
fvwm.scm
game-development.scm gnu: Add python-pygame. 2016-07-30 14:32:49 -04:00
games.scm gnu: tuxpaint-config: Build sequentially. 2016-08-13 11:00:45 -05:00
gawk.scm
gcal.scm
gcc.scm gnu: gcc: Reintroduce dependency on Texinfo. 2016-08-04 19:38:33 +02:00
gd.scm gnu: gd: Add fix for gd2_read test. 2016-07-29 18:28:40 -04:00
gdb.scm
geeqie.scm gnu: exiv2: Update source url. 2016-07-24 21:17:04 +03:00
geo.scm
gettext.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
ghostscript.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
gimp.scm
gkrellm.scm
gl.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
glib.scm
gnome.scm gnu: nautilus: Add gvfs support. 2016-08-10 15:47:09 +02:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
gnunet.scm gnu: gnunet-gtk: Configure with gnunet path. 2016-07-30 15:33:57 +08:00
gnupg.scm gnu: gnupg-1: Use modify-phases syntax. 2016-08-13 20:49:26 -04:00
gnustep.scm gnu: Remove trailing periods from synopsis. 2016-07-29 17:37:22 +02:00
gnuzilla.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
golang.scm gnu: Add Go 1.6. 2016-08-01 01:11:57 +02:00
gperf.scm
gprolog.scm
gps.scm
graphics.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
graphviz.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
groff.scm
grub.scm gnu: grub: Update to 2.02~beta3. 2016-07-13 23:26:04 +02:00
gsasl.scm
gstreamer.scm gnu: python-gst: Update to 1.8.2. 2016-07-18 14:11:21 +03:00
gtk.scm gnu: girara: Update to 0.2.6. 2016-08-07 16:54:30 +03:00
guile-wm.scm
guile.scm gnu: Add guile-commonmark 2016-08-05 09:25:41 +02:00
gv.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
gxmessage.scm
haskell.scm gnu: Remove trailing periods from synopsis. 2016-07-29 17:37:22 +02:00
hexedit.scm gnu: Add hexedit. 2016-07-21 14:06:05 -04:00
hugs.scm
hurd.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
ibus.scm
icu4c.scm
idutils.scm
image.scm gnu: Add perceptualdiff. 2016-07-26 11:20:27 +02:00
imagemagick.scm gnu: imagemagick: Update to 6.9.5-7. 2016-08-15 01:50:16 -04:00
indent.scm
inklingreader.scm
inkscape.scm
irc.scm gnu: Add sic. 2016-08-11 18:12:41 +03:00
iso-codes.scm
java.scm gnu: icedtea-8: Update to 3.1.0. 2016-08-05 18:43:19 -04:00
jemalloc.scm
jrnl.scm
julia.scm gnu: julia: Build with zlib. 2016-07-20 11:37:01 +03:00
kde-frameworks.scm gnu: kde-frameworks: Add threadweaver. 2016-08-13 14:07:46 +02:00
kde.scm gnu: snorenotify: Build with modular qt. 2016-07-07 12:23:39 +03:00
key-mon.scm
kodi.scm
language.scm
ld-wrapper.in Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
ldc.scm
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libupnp.scm
libusb.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
links.scm
linux-libre-4.1-i686.conf
linux-libre-4.1-x86_64.conf
linux-libre-4.4-i686.conf
linux-libre-4.4-x86_64.conf
linux-libre-4.7-i686.conf gnu: linux-libre: Update to 4.7. 2016-07-26 00:46:40 -04:00
linux-libre-4.7-x86_64.conf gnu: linux-libre: Update to 4.7. 2016-07-26 00:46:40 -04:00
linux.scm gnu: linux-libre@4.4: Update to 4.4.17. 2016-08-11 05:21:33 -04:00
lirc.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
lisp.scm Merge branch 'core-updates' 2016-08-04 08:17:05 -04:00
llvm.scm gnu: llvm: Build without debugging symbols. 2016-07-18 20:28:21 -05:00
logging.scm
lout.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
lsof.scm
lua.scm
lxde.scm gnu: Update URLs for sourceforge.net. 2016-07-22 11:47:12 -04:00
lxqt.scm
lynx.scm
m4.scm
machine-learning.scm gnu: Add mcl. 2016-08-08 22:08:17 +10:00
mail.scm gnu: libetpan: Use 'modify-phases'. 2016-08-13 21:18:28 +03:00
make-bootstrap.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
man.scm gnu: help2man: Update to 1.47.4. 2016-07-10 21:34:37 +03:00
markdown.scm gnu: hoedown: Update to 3.0.7. 2016-07-17 16:20:47 +03:00
marst.scm gnu: Sync GNU descriptions with upstream. 2016-07-29 10:13:12 +02:00
mate.scm
maths.scm Merge branch 'core-updates' 2016-08-04 08:17:05 -04:00
mc.scm
mcrypt.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
messaging.scm gnu: pidgin: Update to 2.11.0 [security fixes]. 2016-07-16 11:54:20 -04:00
mg.scm
mit-krb5.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
moe.scm
mono.scm gnu: Add mono. 2016-08-08 14:27:13 -04:00
moreutils.scm
mp3.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
mpd.scm gnu: mpd: Update to 0.19.18. 2016-08-09 21:08:06 -04:00
mpi.scm gnu: openmpi: Make binaries reproducible. 2016-07-20 21:16:24 -05:00
mtools.scm
multiprecision.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
music.scm gnu: tuxguitar: Update to 1.3.2. 2016-08-04 21:32:13 +02:00
musl.scm gnu: Add Musl. 2016-08-13 11:31:39 +02:00
nano.scm
ncdu.scm
ncurses.scm
netpbm.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
nettle.scm
networking.scm gnu: Add Aircrack-ng. 2016-08-13 11:02:51 -05:00
ninja.scm
node.scm
noweb.scm
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
ocr.scm gnu: tesseract-ocr: Update to 3.04.01. 2016-07-21 17:18:42 +03:00
onc-rpc.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
openbox.scm gnu: openbox: Update source location. 2016-08-10 12:11:55 +03:00
openldap.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
openstack.scm gnu: Remove trailing periods from synopsis. 2016-07-29 17:37:22 +02:00
orpheus.scm
ots.scm
owncloud.scm
package-management.scm gnu: diffoscope: Update to 56. 2016-08-12 01:55:47 -04:00
parallel.scm gnu: parallel: Use full paths for executables. 2016-08-08 22:07:49 +10:00
password-utils.scm gnu: password-store: Wrap PATH. 2016-07-29 11:00:31 +02:00
patchutils.scm
pciutils.scm
pcre.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
pdf.scm gnu: zathura-pdf-poppler: Update to 0.2.6. 2016-08-07 16:54:30 +03:00
pem.scm
perl.scm gnu: Add perl-encode-detect. 2016-08-08 22:36:38 -04:00
photo.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
pkg-config.scm
plotutils.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
polkit.scm
popt.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
pretty-print.scm
protobuf.scm gnu: python-protobuf: Update to 3.0.0. 2016-07-29 19:04:31 -04:00
pth.scm
pulseaudio.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
pumpio.scm gnu: pumpa: Remove extra input. 2016-07-06 21:22:36 +03:00
pv.scm
python.scm gnu: Add python-stem. 2016-08-12 13:56:17 -04:00
qemu.scm gnu: Add virt-manager. 2016-08-12 21:04:20 +02:00
qt.scm gnu: qt: Don't build examples. 2016-08-10 12:11:55 +03:00
ragel.scm
rails.scm gnu: ruby-spring: Update to 1.7.2. 2016-08-10 15:36:33 +10:00
ratpoison.scm
rdesktop.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
rdf.scm gnu: sord: Update to 0.14.0. 2016-08-14 16:03:42 +02:00
readline.scm gnu: Add rlwrap. 2016-07-17 08:56:03 +03:00
rrdtool.scm
rsync.scm
ruby.scm gnu: ruby-arel: Update to 7.1.1. 2016-08-10 15:36:33 +10:00
rush.scm
samba.scm gnu: iniparser: Use 'modify-phases'. 2016-07-24 15:43:34 +03:00
sawfish.scm
scanner.scm
scheme.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
screen.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
scribus.scm
scsi.scm gnu: Add sg3-utils. 2016-08-14 12:45:44 -04:00
sdl.scm gnu: Use define-public to export packages. 2016-07-29 17:35:20 +02:00
search.scm gnu: Use define-public to export packages. 2016-07-29 17:35:20 +02:00
serialization.scm
serveez.scm
shells.scm gnu: zsh: Move to shells.scm. 2016-08-04 08:17:39 -04:00
shellutils.scm gnu: Add trash-cli. 2016-07-23 20:34:31 -04:00
shishi.scm
skarnet.scm gnu: Add s6-linux-utils. 2016-08-01 01:11:57 +02:00
skribilo.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
slang.scm
slim.scm gnu: Update URLs for sourceforge.net. 2016-07-22 11:47:12 -04:00
smalltalk.scm
speech.scm
spice.scm gnu: usbredir: Invoke autoreconf directly. 2016-08-15 02:24:11 +02:00
ssh.scm gnu: dropbear: Update to 2016.74 [security fixes]. 2016-08-14 16:19:11 -04:00
stalonetray.scm gnu: stalonetray: Update to 0.8.3. 2016-07-17 16:14:46 +03:00
statistics.scm gnu: python-statsmodels: Fix tests. 2016-08-04 13:40:13 +02:00
suckless.scm gnu: st: Remove unnecessary inputs. 2016-08-12 22:29:50 +08:00
swig.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
sxiv.scm
synergy.scm
task-management.scm
tbb.scm
tcl.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
telephony.scm gnu: Add Seren. 2016-08-02 22:12:45 +03:00
terminals.scm gnu: Add asciinema. 2016-07-28 15:43:40 +02:00
tex.scm Merge branch 'core-updates' 2016-08-04 08:17:05 -04:00
texinfo.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
textutils.scm gnu: Update URLs for sourceforge.net. 2016-07-22 11:47:12 -04:00
time.scm
tls.scm gnu: Add perl-crypt-openssl-random. 2016-08-08 22:36:39 -04:00
tmux.scm gnu: Add Tmux Themepack. 2016-07-10 15:18:17 -04:00
tor.scm gnu: tor: Update to 0.2.8.6. 2016-08-05 21:18:34 +02:00
tre.scm
tv.scm
unrtf.scm
upnp.scm
uucp.scm
valgrind.scm
version-control.scm gnu: git: Update to 2.9.3. 2016-08-13 18:34:22 -04:00
video.scm gnu: libcaca: Add more image support. 2016-08-13 23:16:00 +03:00
vim.scm Rename references to (gnu packages tcsh). 2016-08-03 16:22:31 +02:00
vpn.scm
vtk.scm
w3m.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
wdiff.scm
web.scm gnu: jq: Fix CVE-2015-8863. 2016-08-11 15:42:32 -04:00
webkit.scm
wget.scm
wicd.scm
wine.scm Revert "Merge branch 'core-updates'" 2016-08-04 08:16:38 -04:00
wm.scm gnu: Update URLs for sourceforge.net. 2016-07-21 18:09:40 -04:00
wordnet.scm
wv.scm
wxwidgets.scm gnu: wxwidgets: Update source URL. 2016-07-24 10:36:54 +02:00
xdisorg.scm gnu: Add tint2. 2016-08-08 21:58:02 +02:00
xfce.scm
xfig.scm
xiph.scm gnu: opus: Update to 1.1.3. 2016-07-22 14:02:13 -04:00
xml.scm gnu: Add xlsx2csv. 2016-08-13 20:12:07 +10:00
xnee.scm
xorg.scm gnu: font-xfree86-type1: Add missing input. 2016-08-10 15:59:26 +03:00
yubico.scm
zile.scm
zip.scm